Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 95 件

4UXB
DownloadVisualize
BU of 4uxb by Molmil
Human ARTD1 (PARP1) - Catalytic domain in complex with inhibitor PJ34
分子名称: N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE, POLY ADP-RIBOSE POLYMERASE 1, SULFATE ION
著者Tresaugues, L, Thorsell, A.G, Karlberg, T, Schuler, H.
登録日2014-08-21
公開日2015-09-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Structural Basis for Potency and Promiscuity in Poly(ADP-ribose) Polymerase (PARP) and Tankyrase Inhibitors.
J. Med. Chem., 60, 2017
4DQY
DownloadVisualize
BU of 4dqy by Molmil
Structure of Human PARP-1 bound to a DNA double strand break
分子名称: 1,2-ETHANEDIOL, DNA (26-MER), Poly [ADP-ribose] polymerase 1, ...
著者Langelier, M.F, Pascal, J.M.
登録日2012-02-16
公開日2012-05-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structural basis for DNA damage-dependent poly(ADP-ribosyl)ation by human PARP-1.
Science, 336, 2012
7S68
DownloadVisualize
BU of 7s68 by Molmil
Structure of human PARP1 domains (Zn1, Zn3, WGR and HD) bound to a DNA double strand break.
分子名称: DNA (5'-D(*GP*CP*CP*TP*GP*CP*AP*GP*GP*C)-3'), Fusion of PARP1 zinc fingers 1 and 3 (Zn1, Zn3), ...
著者Rouleau-Turcotte, E, Pascal, J.M.
登録日2021-09-13
公開日2022-06-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Captured snapshots of PARP1 in the active state reveal the mechanics of PARP1 allostery.
Mol.Cell, 82, 2022
4OPX
DownloadVisualize
BU of 4opx by Molmil
Structure of Human PARP-1 bound to a DNA double strand break in complex with (2R)-5-fluoro-2-methyl-2,3-dihydro-1-benzofuran-7-carboxamide
分子名称: (2R)-5-fluoro-2-methyl-2,3-dihydro-1-benzofuran-7-carboxamide, DNA (26-MER), Poly [ADP-ribose] polymerase 1, ...
著者Pascal, J.M, Steffen, J.D.
登録日2014-02-06
公開日2014-07-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.314 Å)
主引用文献Discovery and Structure-Activity Relationship of Novel 2,3-Dihydrobenzofuran-7-carboxamide and 2,3-Dihydrobenzofuran-3(2H)-one-7-carboxamide Derivatives as Poly(ADP-ribose)polymerase-1 Inhibitors.
J.Med.Chem., 57, 2014
4OQB
DownloadVisualize
BU of 4oqb by Molmil
Structure of Human PARP-1 bound to a DNA double strand break in complex with (2Z)-2-{4-[2-(morpholin-4-yl)ethoxy]benzylidene}-3-oxo-2,3-dihydro-1-benzofuran-7-carboxamide
分子名称: (2Z)-2-{4-[2-(morpholin-4-yl)ethoxy]benzylidene}-3-oxo-2,3-dihydro-1-benzofuran-7-carboxamide, DNA (26-MER), Poly [ADP-ribose] polymerase 1, ...
著者Pascal, J.M, Steffen, J.D.
登録日2014-02-07
公開日2014-07-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.362 Å)
主引用文献Discovery and Structure-Activity Relationship of Novel 2,3-Dihydrobenzofuran-7-carboxamide and 2,3-Dihydrobenzofuran-3(2H)-one-7-carboxamide Derivatives as Poly(ADP-ribose)polymerase-1 Inhibitors.
J.Med.Chem., 57, 2014
8FYZ
DownloadVisualize
BU of 8fyz by Molmil
Crystal structure of human PARP1 ART domain bound to inhibitor UKTT10 (compound 13)
分子名称: (2P)-2-{3-[(4R)-3-(trifluoromethyl)-5,6-dihydro[1,2,4]triazolo[4,3-a]pyrazine-7(8H)-carbonyl]phenyl}-1H-benzimidazole-4-carboxamide, CITRIC ACID, DIMETHYL SULFOXIDE, ...
著者Rouleau-Turcotte, E, Pascal, J.M.
登録日2023-01-27
公開日2024-02-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Novel modifications of PARP inhibitor veliparib increase PARP1 binding to DNA breaks.
Biochem.J., 481, 2024
7SCZ
DownloadVisualize
BU of 7scz by Molmil
Nuc147 bound to multiple BRCTs
分子名称: DNA (147-MER), Histone H2A, Histone H2B type 1-J, ...
著者Muthurajan, U.M, Rudolph, J.
登録日2021-09-29
公開日2022-01-19
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The BRCT domain of PARP1 binds intact DNA and mediates intrastrand transfer.
Mol.Cell, 81, 2021
7S81
DownloadVisualize
BU of 7s81 by Molmil
Structure of human PARP1 domains (Zn1, Zn3, WGR, HD) bound to a DNA double strand break.
分子名称: DNA (5'-D(*AP*TP*GP*CP*GP*GP*CP*CP*GP*CP*AP*T)-3'), Poly [ADP-ribose] polymerase 1, ZINC ION
著者Rouleau-Turcotte, E, Pascal, J.M.
登録日2021-09-17
公開日2022-06-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Captured snapshots of PARP1 in the active state reveal the mechanics of PARP1 allostery.
Mol.Cell, 82, 2022
4OQA
DownloadVisualize
BU of 4oqa by Molmil
Structure of Human PARP-1 bound to a DNA double strand break in complex with (2Z)-2-(2,4-dihydroxybenzylidene)-3-oxo-2,3-dihydro-1-benzofuran-7-carboxamide
分子名称: (2Z)-2-(2,4-dihydroxybenzylidene)-3-oxo-2,3-dihydro-1-benzofuran-7-carboxamide, DNA (26-MER), Poly [ADP-ribose] polymerase 1, ...
著者Pascal, J.M, Steffen, J.D.
登録日2014-02-07
公開日2014-07-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献Discovery and Structure-Activity Relationship of Novel 2,3-Dihydrobenzofuran-7-carboxamide and 2,3-Dihydrobenzofuran-3(2H)-one-7-carboxamide Derivatives as Poly(ADP-ribose)polymerase-1 Inhibitors.
J.Med.Chem., 57, 2014
8G0H
DownloadVisualize
BU of 8g0h by Molmil
Human PARP1 deltaV687-E688 bound to UKTT5 (compound 10) and to a DNA double strand break.
分子名称: 2-(4-{[2-(1H-benzimidazol-2-yl)ethyl]carbamoyl}phenyl)-1H-benzimidazole-7-carboxamide, DNA (5'-D(*CP*GP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*CP*G)-3'), ...
著者Rouleau-Turcotte, E, Pascal, J.M.
登録日2023-01-31
公開日2024-02-07
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Novel modifications of PARP inhibitor veliparib increase PARP1 binding to DNA breaks.
Biochem.J., 481, 2024
5HA9
DownloadVisualize
BU of 5ha9 by Molmil
Crystal structure-based design and disovery of a novel PARP1 antiagonist (BL-PA10) that induces apoptosis and inhibits metastasis in triple negative breast cancer
分子名称: Amitriptyline, GLYCEROL, Poly [ADP-ribose] polymerase 1, ...
著者Fu, L, Peng, H, Zhang, L, Ouyang, L.
登録日2015-12-30
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (4.01 Å)
主引用文献Crystal structure-based discovery of a novel synthesized PARP1 inhibitor (OL-1) with apoptosis-inducing mechanisms in triple-negative breast cancer.
Sci Rep, 6, 2016
7SCY
DownloadVisualize
BU of 7scy by Molmil
Nuc147 bound to single BRCT
分子名称: DNA (147-MER), Histone H2A, Histone H2B type 1-J, ...
著者Muthurajan, U.M, Rudolph, J.R.
登録日2021-09-29
公開日2022-01-12
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献The BRCT domain of PARP1 binds intact DNA and mediates intrastrand transfer.
Mol.Cell, 81, 2021
2CR9
DownloadVisualize
BU of 2cr9 by Molmil
Solution structure of WGR domain of poly(ADP-ribose) polymerase-1
分子名称: Poly [ADP-ribose] polymerase-1
著者Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-20
公開日2005-11-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of WGR domain of poly(ADP-ribose) polymerase-1
To be published
2L30
DownloadVisualize
BU of 2l30 by Molmil
Human PARP-1 zinc finger 1
分子名称: Poly [ADP-ribose] polymerase 1, ZINC ION
著者Neuhaus, D, Eustermann, S, Yang, J, Videler, H.
登録日2010-08-30
公開日2011-02-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The DNA-binding domain of human PARP-1 interacts with DNA single-strand breaks as a monomer through its second zinc finger.
J.Mol.Biol., 407, 2011
2JVN
DownloadVisualize
BU of 2jvn by Molmil
Domain C of human PARP-1
分子名称: Poly [ADP-ribose] polymerase 1, ZINC ION
著者Hoffman, D, Tao, Z, Liu, H.
登録日2007-09-24
公開日2008-05-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Domain C of human poly(ADP-ribose) polymerase-1 is important for enzyme activity and contains a novel zinc-ribbon motif.
Biochemistry, 47, 2008
2L31
DownloadVisualize
BU of 2l31 by Molmil
Human PARP-1 zinc finger 2
分子名称: Poly [ADP-ribose] polymerase 1, ZINC ION
著者Neuhaus, D, Eustermann, S, Yang, J, Videler, H.
登録日2010-08-30
公開日2011-02-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The DNA-binding domain of human PARP-1 interacts with DNA single-strand breaks as a monomer through its second zinc finger.
J.Mol.Biol., 407, 2011
2N8A
DownloadVisualize
BU of 2n8a by Molmil
1H, 13C and 15N chemical shift assignments and solution structure for PARP-1 F1F2 domains in complex with a DNA single-strand break
分子名称: DNA (45-MER), Poly [ADP-ribose] polymerase 1, ZINC ION
著者Neuhaus, D, Eustermann, S, Yang, J, Wu, W.
登録日2015-10-08
公開日2015-12-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Basis of Detection and Signaling of DNA Single-Strand Breaks by Human PARP-1.
Mol.Cell, 60, 2015
2DMJ
DownloadVisualize
BU of 2dmj by Molmil
Solution structure of the first zf-PARP domain of human Poly(ADP-ribose)polymerase-1
分子名称: ZINC ION, poly (ADP-ribose) polymerase family, member 1
著者Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-21
公開日2007-04-24
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the first zf-PARP domain of human Poly(ADP-ribose)polymerase-1
To be Published
2CS2
DownloadVisualize
BU of 2cs2 by Molmil
Solution structure of the second Zn-finger domain of poly(ADP-ribose) polymerase-1
分子名称: Poly [ADP-ribose] polymerase-1, ZINC ION
著者Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-20
公開日2005-11-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the second Zn-finger domain of poly(ADP-ribose) polymerase-1
To be published
2COK
DownloadVisualize
BU of 2cok by Molmil
Solution structure of BRCT domain of poly(ADP-ribose) polymerase-1
分子名称: Poly [ADP-ribose] polymerase-1
著者Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of BRCT domain of poly(ADP-ribose) polymerase-1
To be Published
<1234

 

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon