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PDB: 287 件

6IY3
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BU of 6iy3 by Molmil
Structure of Snf2-MMTV-A nucleosome complex at shl-2 in ADP state
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (147-MER), Histone H2A, ...
著者Li, M, Xia, X, Liu, X, Li, X, Chen, Z.
登録日2018-12-12
公開日2019-04-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Mechanism of DNA translocation underlying chromatin remodelling by Snf2.
Nature, 567, 2019
7M1X
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BU of 7m1x by Molmil
Cryo-EM Structure of Nucleosome containing mouse histone variant H2A.Z
分子名称: DNA (136-MER), Histone H2A.Z, Histone H2B 1.1, ...
著者Tan, D, Lewis, T.
登録日2021-03-15
公開日2021-09-29
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of chromatin regulation by histone variant H2A.Z.
Nucleic Acids Res., 49, 2021
6LTJ
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BU of 6ltj by Molmil
Structure of nucleosome-bound human BAF complex
分子名称: AT-rich interactive domain-containing protein 1A, Actin, cytoplasmic 1, ...
著者He, S, Wu, Z, Tian, Y, Yu, Z, Yu, J, Wang, X, Li, J, Liu, B, Xu, Y.
登録日2020-01-22
公開日2020-02-12
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of nucleosome-bound human BAF complex.
Science, 367, 2020
6UGM
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BU of 6ugm by Molmil
Structural basis of COMPASS eCM recognition of an unmodified nucleosome
分子名称: Bre2, DNA (146-MER), H3 N-terminus, ...
著者Hsu, P.L, Shi, H, Zheng, N.
登録日2019-09-26
公開日2019-11-20
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural Basis of H2B Ubiquitination-Dependent H3K4 Methylation by COMPASS.
Mol.Cell, 76, 2019
6ESF
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BU of 6esf by Molmil
Nucleosome : Class 1
分子名称: DNA (147-MER), Histone H2A, Histone H2B 1.1, ...
著者Bilokapic, S, Halic, M.
登録日2017-10-20
公開日2017-12-20
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Histone octamer rearranges to adapt to DNA unwrapping.
Nat. Struct. Mol. Biol., 25, 2018
8IHT
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BU of 8iht by Molmil
Rpd3S bound to the nucleosome
分子名称: CALCIUM ION, Chromatin modification-related protein EAF3, DNA (164-MER), ...
著者Zhang, Y, Gang, C.
登録日2023-02-23
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献Structural basis for nucleosome binding and catalysis by the yeast Rpd3S/HDAC holoenzyme.
Cell Res., 33, 2023
7CRO
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BU of 7cro by Molmil
NSD2 bearing E1099K/T1150A dual mutation in complex with 187-bp NCP
分子名称: DNA (168-MER), Histone H2A, Histone H2B, ...
著者Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
登録日2020-08-14
公開日2020-10-21
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021
8BZ1
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BU of 8bz1 by Molmil
RNA polymerase II core pre-initiation complex with the proximal +1 nucleosome (cPIC-Nuc10W)
分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB11-a, ...
著者Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P.
登録日2022-12-14
公開日2023-05-03
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis of transcription reduction by a promoter-proximal +1 nucleosome.
Mol.Cell, 83, 2023
6NZO
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BU of 6nzo by Molmil
Set2 bound to nucleosome
分子名称: DNA (149-MER), Histone H2B 1.1, Histone H3, ...
著者Halic, M, Bilokapic, S.
登録日2019-02-14
公開日2019-08-28
最終更新日2019-09-04
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Nucleosome and ubiquitin position Set2 to methylate H3K36.
Nat Commun, 10, 2019
6FQ5
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BU of 6fq5 by Molmil
Class 1 : canonical nucleosome
分子名称: DNA (147-MER), Histone H2A, Histone H2B, ...
著者Bilokapic, S, Halic, M.
登録日2018-02-13
公開日2018-04-18
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural rearrangements of the histone octamer translocate DNA.
Nat Commun, 9, 2018
4ZUX
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BU of 4zux by Molmil
SAGA DUB module Ubp8/Sgf11/Sus1/Sgf73 bound to ubiqitinated nucleosome
分子名称: DNA (145-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Morgan, M, Wolberger, C.
登録日2015-05-17
公開日2016-02-24
最終更新日2016-03-09
実験手法X-RAY DIFFRACTION (3.82 Å)
主引用文献Structural basis for histone H2B deubiquitination by the SAGA DUB module.
Science, 351, 2016
6K1P
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BU of 6k1p by Molmil
The complex of ISWI-nucleosome in the ADP.BeF-bound state
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (167-MER), ...
著者Yan, L.J, Wu, H, Li, X.M, Gao, N, Chen, Z.C.
登録日2019-05-10
公開日2019-05-29
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.87 Å)
主引用文献Structures of the ISWI-nucleosome complex reveal a conserved mechanism of chromatin remodeling.
Nat.Struct.Mol.Biol., 26, 2019
6TEM
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BU of 6tem by Molmil
CENP-A nucleosome core particle with 145 base pairs of the Widom 601 sequence by cryo-EM
分子名称: Histone H2A, Histone H2B 1.1, Histone H3-like centromeric protein A, ...
著者Boopathi, R, Danev, R, Petosa, C, Bednar, J.
登録日2019-11-12
公開日2020-04-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Phase-plate cryo-EM structure of the Widom 601 CENP-A nucleosome core particle reveals differential flexibility of the DNA ends.
Nucleic Acids Res., 48, 2020
6NOG
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BU of 6nog by Molmil
Poised-state Dot1L bound to the H2B-Ubiquitinated nucleosome
分子名称: 601 DNA Strand 1, 601 DNA Strand 2, Histone H2A type 1, ...
著者Worden, E.J, Hoffmann, N.A, Wolberger, C.
登録日2019-01-16
公開日2019-02-20
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Mechanism of Cross-talk between H2B Ubiquitination and H3 Methylation by Dot1L.
Cell, 176, 2019
6NN6
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BU of 6nn6 by Molmil
Structure of Dot1L-H2BK120ub nucleosome complex
分子名称: DNA (145-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Anderson, C.J, Baird, M.R, Hsu, A, Barbour, E.H, Koyama, Y, Borgnia, M.J, McGinty, R.K.
登録日2019-01-14
公開日2019-02-13
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural Basis for Recognition of Ubiquitylated Nucleosome by Dot1L Methyltransferase.
Cell Rep, 26, 2019
6VZ4
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BU of 6vz4 by Molmil
Cryo-EM structure of Sth1-Arp7-Arp9-Rtt102 bound to the nucleosome in ADP Beryllium Fluoride state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin-like protein ARP9, ...
著者Leschziner, A.E, Baker, R.W.
登録日2020-02-27
公開日2020-12-02
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural insights into assembly and function of the RSC chromatin remodeling complex.
Nat.Struct.Mol.Biol., 28, 2021
6NE3
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BU of 6ne3 by Molmil
Cryo-EM structure of singly-bound SNF2h-nucleosome complex with SNF2h bound at SHL-2
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (156-MER), Histone H2A type 1, ...
著者Armache, J.-P, Gamarra, N, Johnson, S.L, Leonard, J.D, Wu, S, Narlikar, G.N, Cheng, Y.
登録日2018-12-16
公開日2019-07-17
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM structures of remodeler-nucleosome intermediates suggest allosteric control through the nucleosome.
Elife, 8, 2019
7YI5
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BU of 7yi5 by Molmil
Cryo-EM structure of Rpd3S complex bound to H3K36me3 nucleosome in loose state
分子名称: Chromatin modification-related protein EAF3, Histone H2A, Histone H2B 1.1, ...
著者Li, H.T, Yan, C.Y, Guan, H.P, Wang, P.
登録日2022-07-14
公開日2023-06-14
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S.
Nature, 620, 2023
7YI4
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BU of 7yi4 by Molmil
Cryo-EM structure of Rpd3S complex bound to H3K36me3 nucleosome in close state
分子名称: Chromatin modification-related protein EAF3, Histone H2A, Histone H2B 1.1, ...
著者Li, H.T, Yan, C.Y, Guan, H.P, Wang, P.
登録日2022-07-14
公開日2023-06-14
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S.
Nature, 620, 2023
5X0X
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BU of 5x0x by Molmil
Complex of Snf2-Nucleosome complex with Snf2 bound to position +6 of the nucleosome
分子名称: DNA (167-MER), Histone H2A, Histone H2B 1.1, ...
著者Li, M, Liu, X, Xia, X, Chen, Z, Li, X.
登録日2017-01-23
公開日2017-04-19
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.97 Å)
主引用文献Mechanism of chromatin remodelling revealed by the Snf2-nucleosome structure.
Nature, 544, 2017
8CBQ
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BU of 8cbq by Molmil
structure of LEDGF/p75 PWWP domain bound to the H3K36 trimethylated dinucleosome
分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ...
著者Koutna, E, Kouba, T, Novacek, J, Veverka, V.
登録日2023-01-25
公開日2023-09-06
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Multivalency of nucleosome recognition by LEDGF.
Nucleic Acids Res., 51, 2023
6KIV
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BU of 6kiv by Molmil
Cryo-EM structure of human MLL1-ubNCP complex (4.0 angstrom)
分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Huang, J, Xue, H, Yao, T.
登録日2019-07-20
公開日2019-09-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis of nucleosome recognition and modification by MLL methyltransferases.
Nature, 573, 2019
6RYU
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BU of 6ryu by Molmil
Nucleosome-CHD4 complex structure (two CHD4 copies)
分子名称: Chromodomain-helicase-DNA-binding protein 4,CHD4,Chromodomain-helicase-DNA-binding protein 4, DNA (149-MER), Histone H2A type 1, ...
著者Farnung, L, Ochmann, M, Cramer, P.
登録日2019-06-12
公開日2020-07-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Nucleosome-CHD4 chromatin remodeller structure maps human disease mutations.
Elife, 9, 2020
6KIW
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BU of 6kiw by Molmil
Cryo-EM structure of human MLL3-ubNCP complex (4.0 angstrom)
分子名称: DNA (144-MER), DNA (145-MER), Histone H2A, ...
著者Huang, J, Xue, H, Yao, T.
登録日2019-07-20
公開日2019-09-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis of nucleosome recognition and modification by MLL methyltransferases.
Nature, 573, 2019
8BVW
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BU of 8bvw by Molmil
RNA polymerase II pre-initiation complex with the distal +1 nucleosome (PIC-Nuc18W)
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P.
登録日2022-12-20
公開日2023-05-03
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis of transcription reduction by a promoter-proximal +1 nucleosome.
Mol.Cell, 83, 2023

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件を2024-09-11に公開中

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