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3L6C
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BU of 3l6c by Molmil
X-ray crystal structure of rat serine racemase in complex with malonate a potent inhibitor
Descriptor: MALONATE ION, MANGANESE (II) ION, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Smith, M.A, Mack, V, Ebneth, A, Moraes, I, Felicetti, B, Wood, M, Schonfeld, D, Mather, O, Cesura, A, Barker, J.
Deposit date:2009-12-23
Release date:2010-01-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of mammalian serine racemase: evidence for conformational changes upon inhibitor binding.
J.Biol.Chem., 285, 2010
5GV3
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BU of 5gv3 by Molmil
Crystal structure of the membrane-distal domain of mouse lysosome-associated membrane protein 2 (LAMP-2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lysosome-associated membrane glycoprotein 2, ZINC ION
Authors:Tomabechi, Y, Ehara, H, Kukimoto-Niino, M, Shirouzu, M.
Deposit date:2016-09-01
Release date:2017-09-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.096 Å)
Cite:Lysosome-associated membrane proteins-1 and -2 (LAMP-1 and LAMP-2) assemble via distinct modes.
Biochem. Biophys. Res. Commun., 479, 2016
3L6W
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BU of 3l6w by Molmil
Structure of the collar functional unit (KLH1-H) of keyhole limpet hemocyanin
Descriptor: Hemocyanin 1
Authors:Jaenicke, E, Buechler, K, Markl, J, Decker, H, Barends, T.R.M.
Deposit date:2009-12-27
Release date:2010-02-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (4 Å)
Cite:The Cupredoxin-like Domains in Hemocyanins.
Biochem.J., 2009
5GVK
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BU of 5gvk by Molmil
Plasmodium vivax SHMT bound with PLP-glycine and GS256
Descriptor: 5-[3-[(4~{S})-6-azanyl-5-cyano-3-methyl-4-propan-2-yl-2~{H}-pyrano[2,3-c]pyrazol-4-yl]-5-cyano-phenyl]-~{N},~{N}-dimethyl-thiophene-2-sulfonamide, CHLORIDE ION, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], ...
Authors:Chitnumsub, P, Jaruwat, A, Leartsakulpanich, U, Schwertz, G.
Deposit date:2016-09-06
Release date:2017-07-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Antimalarial Inhibitors Targeting Serine Hydroxymethyltransferase (SHMT) with in Vivo Efficacy and Analysis of their Binding Mode Based on X-ray Cocrystal Structures
J. Med. Chem., 60, 2017
3L77
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BU of 3l77 by Molmil
X-ray structure alcohol dehydrogenase from archaeon Thermococcus sibiricus complexed with 5-hydroxy-NADP
Descriptor: 1,2-ETHANEDIOL, 5-hydroxy-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, GLYCEROL, ...
Authors:Lyashenko, A.V, Lashkov, A.A, Gabdoulkhakov, A.G, Mikhailov, A.M.
Deposit date:2009-12-28
Release date:2011-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:X-ray structure alcohol dehydrogenase from archaeon Thermococcus sibiricus complexed with 5-hydroxy-NADP
To be Published
5H1X
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BU of 5h1x by Molmil
Crystal Structure of rat Nup62 Coiled-coil motif
Descriptor: Nuclear pore glycoprotein p62
Authors:Pravin, D.
Deposit date:2016-10-12
Release date:2017-10-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:The Nup62 Coiled-Coil Motif Provides Plasticity for Triple-Helix Bundle Formation
Biochemistry, 56, 2017
5GW5
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BU of 5gw5 by Molmil
Structure of TRiC-AMP-PNP
Descriptor: T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, T-complex protein 1 subunit delta, ...
Authors:Zang, Y, Jin, M, Wang, H, Cong, Y.
Deposit date:2016-09-08
Release date:2016-10-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Staggered ATP binding mechanism of eukaryotic chaperonin TRiC (CCT) revealed through high-resolution cryo-EM.
Nat. Struct. Mol. Biol., 23, 2016
3L7L
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Structure of the Wall Teichoic Acid Polymerase TagF, H444N + CDPG (30 minute soak)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SULFATE ION, ...
Authors:Lovering, A.L, Strynadka, N.C.J.
Deposit date:2009-12-28
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure of the bacterial teichoic acid polymerase TagF provides insights into membrane association and catalysis.
Nat.Struct.Mol.Biol., 17, 2010
5H21
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BU of 5h21 by Molmil
Trimethoxy-ring inhibitor in complex with the first bromodomain of BRD4
Descriptor: 3,4,5-trimethoxy-~{N}-(2-thiophen-2-ylethyl)benzamide, Bromodomain-containing protein 4
Authors:Zhang, H, Luo, C.
Deposit date:2016-10-13
Release date:2017-07-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.591 Å)
Cite:Discovery of novel trimethoxy-ring BRD4 bromodomain inhibitors: AlphaScreen assay, crystallography and cell-based assay.
Medchemcomm, 8, 2017
7S27
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BU of 7s27 by Molmil
Crystal structure of hen egg white lysozyme
Descriptor: Lysozyme C, SODIUM ION
Authors:Lima, L.M.T.R, Ramos, N.G, Ribeiro, F.S.
Deposit date:2021-09-03
Release date:2022-07-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The reproducible normality of the crystallographic B-factor.
Anal.Biochem., 645, 2022
3LKL
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BU of 3lkl by Molmil
Crystal structure of the C-terminal domain of Anti-Sigma factor antagonist STAS from Rhodobacter sphaeroides
Descriptor: Antisigma-factor antagonist STAS
Authors:Nocek, B, Marshall, N, Davidoff, J, Freeman, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-01-27
Release date:2010-03-09
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of the C-terminal domain of Anti-Sigma factor antagonist STAS from Rhodobacter sphaeroides
To be Published
5GZ8
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BU of 5gz8 by Molmil
Crystal structure of catalytic domain of Protein O-mannosyl Kinase in ligand-free form
Descriptor: Protein O-mannose kinase
Authors:Nagae, M, Yamaguchi, Y.
Deposit date:2016-09-27
Release date:2017-03-29
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:3D structural analysis of protein O-mannosyl kinase, POMK, a causative gene product of dystroglycanopathy.
Genes Cells, 22, 2017
5GV2
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BU of 5gv2 by Molmil
Crystal structure of Arginine-bound CASTOR1 from Homo sapiens
Descriptor: ARGININE, GATS-like protein 3, MAGNESIUM ION
Authors:Gai, Z.C, Wu, G.
Deposit date:2016-09-01
Release date:2017-09-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural mechanism for the arginine sensing and regulation of CASTOR1 in the mTORC1 signaling pathway
Cell Discov, 2, 2016
5GZF
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BU of 5gzf by Molmil
Galectin-8 N-terminal domain carbohydrate recognition domain
Descriptor: Galectin-8, NICKEL (II) ION, SODIUM ION, ...
Authors:Su, J.Y, Si, Y.L.
Deposit date:2016-09-28
Release date:2016-12-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystallization of Galectin-8 Linker Reveals Intricate Relationship between the N-terminal Tail and the Linker.
Int J Mol Sci, 17, 2016
3LL7
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BU of 3ll7 by Molmil
Crystal structure of putative methyltransferase PG_1098 from Porphyromonas gingivalis W83
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Putative methyltransferase
Authors:Chang, C, Chhor, G, Buck, K, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-01-28
Release date:2010-02-16
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of putative methyltransferase PG_1098 from Porphyromonas gingivalis W83
To be Published
5GVI
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BU of 5gvi by Molmil
Zebrafish USP30 in complex with Lys6-linked diubiquitin
Descriptor: Ubiquitin carboxyl-terminal hydrolase 30, ZINC ION, ubiquitin
Authors:Sato, Y, Fukai, S.
Deposit date:2016-09-05
Release date:2017-09-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural basis for specific cleavage of Lys6-linked polyubiquitin chains by USP30
Nat. Struct. Mol. Biol., 24, 2017
5GZN
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BU of 5gzn by Molmil
Structure of neutralizing antibody bound to Zika envelope protein
Descriptor: Antibody Heavy chain, Antibody light chain, Genome polyprotein
Authors:Wang, Q, Yang, H, Liu, X, Dai, L, Ma, T, Qi, J, Wong, G, Peng, R, Liu, S, Li, J, Li, S, Song, J, Liu, J, He, J, Yuan, H, Xiong, Y, Liao, Y, Li, J, Yang, J, Tong, Z, Griffin, B, Bi, Y, Liang, M, Xu, X, Cheng, G, Wang, P, Qiu, X, Kobinger, G, Shi, Y, Yan, J, Gao, G.F.
Deposit date:2016-09-29
Release date:2016-12-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Molecular determinants of human neutralizing antibodies isolated from a patient infected with Zika virus
Sci Transl Med, 8, 2016
7S2W
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BU of 7s2w by Molmil
Crystal structure of hen egg white lysozyme
Descriptor: Lysozyme C, SODIUM ION
Authors:Lima, L.M.T.R, Ramos, N.G.
Deposit date:2021-09-03
Release date:2022-07-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The reproducible normality of the crystallographic B-factor.
Anal.Biochem., 645, 2022
3LLI
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BU of 3lli by Molmil
Sulfhydryl Oxidase Fragment of Human QSOX1
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Sulfhydryl oxidase 1
Authors:Alon, A, Fass, D.
Deposit date:2010-01-29
Release date:2010-03-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:QSOX contains a pseudo-dimer of functional and degenerate sulfhydryl oxidase domains.
Febs Lett., 584, 2010
5H16
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BU of 5h16 by Molmil
Crystal structure of the complex of Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with citrate at 2.3 A resolution.
Descriptor: CITRIC ACID, Phosphopantetheine adenylyltransferase
Authors:Gupta, A, Singh, P.K, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2016-10-08
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the complex of Phosphopantetheine adenylyltransferase from Acinetobacter baumannii at 2.3 A resolution.
To Be Published
3L9F
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BU of 3l9f by Molmil
The Crystal Structure of smu.1604c from Streptococcus mutans UA159
Descriptor: MAGNESIUM ION, Putative uncharacterized protein smu.1604c
Authors:Su, X.-D, Liu, X.
Deposit date:2010-01-05
Release date:2011-01-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Crystal Structure of smu.1604c from Streptococcus mutans UA159
TO BE PUBLISHED
5GVW
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BU of 5gvw by Molmil
Crystal structure of the apo-form glycosyltransferase GlyE in Streptococcus pneumoniae TIGR4
Descriptor: Glycosyl transferase family 8, MANGANESE (II) ION
Authors:Jiang, Y.L, Jin, H, Zhao, R.L, Yang, H.B, Chen, Y, Zhou, C.Z.
Deposit date:2016-09-07
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Defining the enzymatic pathway for polymorphic O-glycosylation of the pneumococcal serine-rich repeat protein PsrP.
J. Biol. Chem., 292, 2017
5H1O
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BU of 5h1o by Molmil
CRISPR-associated protein
Descriptor: ACETATE ION, CRISPR-associated endoribonuclease Cas2
Authors:Ka, D, Jeong, U, Bae, E.
Deposit date:2016-10-11
Release date:2017-10-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural and dynamic insights into the role of conformational switching in the nuclease activity of the Xanthomonas albilineans Cas2 in CRISPR-mediated adaptive immunity
Struct Dyn, 4, 2017
3LLS
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BU of 3lls by Molmil
Crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase from Mycobacterium tuberculosis
Descriptor: 1,2-ETHANEDIOL, 3-ketoacyl-(Acyl-carrier-protein) reductase, SULFATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2010-01-29
Release date:2010-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
5GWL
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BU of 5gwl by Molmil
Structure of two CCTG repeats
Descriptor: DNA (5'-D(*CP*CP*TP*GP*CP*CP*TP*G)-3'), SODIUM ION
Authors:Guo, P, Lam, S.L.
Deposit date:2016-09-12
Release date:2016-10-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Minidumbbell: A New Form of Native DNA Structure
J.Am.Chem.Soc., 138, 2016

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PDB entries from 2024-08-21

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