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7W3A
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BU of 7w3a by Molmil
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED4_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3J
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BU of 7w3j by Molmil
Structure of USP14-bound human 26S proteasome in substrate-inhibited state SC_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3K
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BU of 7w3k by Molmil
Structure of USP14-bound human 26S proteasome in substrate-inhibited state SD4_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3M
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BU of 7w3m by Molmil
Structure of USP14-bound human 26S proteasome in substrate-inhibited state SD5_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-18
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3I
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BU of 7w3i by Molmil
Structure of USP14-bound human 26S proteasome in substrate-inhibited state SB_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-18
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7XHH
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BU of 7xhh by Molmil
High-resolution X-ray cocrystal structure of USP7 in complex with X4
Descriptor: 3-[4-(aminomethyl)phenyl]-6-[[1-[[2-chloranyl-4-(1,2,4-oxadiazol-3-yl)phenyl]methyl]-4-oxidanyl-piperidin-4-yl]methyl]-2-methyl-pyrazolo[4,3-d]pyrimidin-7-one, Ubiquitin carboxyl-terminal hydrolase 7
Authors:Sun, H.B, Wen, X.A.
Deposit date:2022-04-08
Release date:2023-04-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High-resolution X-ray cocrystal structure of USP7 in complex with X4
To Be Published
7XHK
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BU of 7xhk by Molmil
High-resolution X-ray cocrystal structure of USP7 in complex with LX04-46
Descriptor: Ubiquitin carboxyl-terminal hydrolase 7, ~{N}-[[4-[6-[[1-[[2-chloranyl-4-(furan-2-yl)phenyl]methyl]-4-oxidanyl-piperidin-4-yl]methyl]-2-methyl-7-oxidanylidene-pyrazolo[4,3-d]pyrimidin-3-yl]phenyl]methyl]methanamide
Authors:Sun, H.B, Wen, X.A.
Deposit date:2022-04-08
Release date:2023-06-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:High-resolution X-ray cocrystal structure of USP7 in complex with LX04-46
To Be Published
7W3R
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BU of 7w3r by Molmil
USP34 catalytic domain
Descriptor: Ubiquitin carboxyl-terminal hydrolase 34, ZINC ION
Authors:Xu, G.L, Ming, Z.H.
Deposit date:2021-11-26
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural Insights into the Catalytic Mechanism and Ubiquitin Recognition of USP34.
J.Mol.Biol., 434, 2022
7W3U
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BU of 7w3u by Molmil
USP34 catalytic domain in complex with UbPA
Descriptor: Polyubiquitin-B, Ubiquitin carboxyl-terminal hydrolase 34, ZINC ION, ...
Authors:Xu, G.L, Ming, Z.H.
Deposit date:2021-11-26
Release date:2022-06-01
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (3.13 Å)
Cite:Structural Insights into the Catalytic Mechanism and Ubiquitin Recognition of USP34.
J.Mol.Biol., 434, 2022
5XVE
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BU of 5xve by Molmil
Crystal structure of human USP2 C276S mutant in complex with ubiquitin
Descriptor: Ubiquitin carboxyl-terminal hydrolase 2, Ubiquitin-40S ribosomal protein S27a, ZINC ION
Authors:Chou, C.Y, Tang, H.C.
Deposit date:2017-06-27
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:6-Thioguanine is a noncompetitive and slow binding inhibitor of human deubiquitinating protease USP2
Sci Rep, 8, 2018
6IIK
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BU of 6iik by Molmil
USP14 catalytic domain with IU1
Descriptor: 1-[1-(4-fluorophenyl)-2,5-dimethyl-1H-pyrrol-3-yl]-2-(pyrrolidin-1-yl)ethan-1-one, Ubiquitin carboxyl-terminal hydrolase 14
Authors:Mei, Z.Q, Wang, Y.W, He, W, Wang, F.
Deposit date:2018-10-06
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Small molecule inhibitors reveal allosteric regulation of USP14 via steric blockade.
Cell Res., 28, 2018
6JLQ
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BU of 6jlq by Molmil
Crystal structure of human USP46-WDR48-WDR20 complex
Descriptor: GLYCEROL, PHOSPHATE ION, Ubiquitin carboxyl-terminal hydrolase 46, ...
Authors:Zhu, H, Zhang, T, Ding, J.
Deposit date:2019-03-06
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.101 Å)
Cite:Structural insights into the activation of USP46 by WDR48 and WDR20.
Cell Discov, 5, 2019
6IIM
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BU of 6iim by Molmil
USP14 catalytic domain with IU1-206
Descriptor: 1-[1-(4-chlorophenyl)-2,5-dimethyl-1H-pyrrol-3-yl]-2-(4-hydroxypiperidin-1-yl)ethan-1-one, Ubiquitin carboxyl-terminal hydrolase 14
Authors:Mei, Z.Q, Wang, J.W, Wang, F, Wang, Y.W.
Deposit date:2018-10-07
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Small molecule inhibitors reveal allosteric regulation of USP14 via steric blockade.
Cell Res., 28, 2018
6IIN
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BU of 6iin by Molmil
USP14 catalytic domain with IU1-248
Descriptor: 4-{3-[(4-hydroxypiperidin-1-yl)acetyl]-2,5-dimethyl-1H-pyrrol-1-yl}benzonitrile, Ubiquitin carboxyl-terminal hydrolase 14
Authors:Mei, Z.Q, Wang, J.W, Wang, F, Wang, Y.W.
Deposit date:2018-10-07
Release date:2018-12-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Small molecule inhibitors reveal allosteric regulation of USP14 via steric blockade.
Cell Res., 28, 2018
6IIL
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BU of 6iil by Molmil
USP14 catalytic domain bind to IU1-47
Descriptor: 1-[1-(4-chlorophenyl)-2,5-dimethyl-1H-pyrrol-3-yl]-2-(piperidin-1-yl)ethan-1-one, Ubiquitin carboxyl-terminal hydrolase 14
Authors:Mei, Z.Q, Wang, Y.W, Wang, F, Wang, J.W, He, W, Ding, S, Li, J.W.
Deposit date:2018-10-07
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Small molecule inhibitors reveal allosteric regulation of USP14 via steric blockade.
Cell Res., 28, 2018
5OHP
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BU of 5ohp by Molmil
Crystal structure of USP30 (C77A) in complex with Lys6-linked diubiquitin
Descriptor: Polyubiquitin-B, Ubiquitin carboxyl-terminal hydrolase 30, ZINC ION
Authors:Gersch, M, Komander, D.
Deposit date:2017-07-17
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanism and regulation of the Lys6-selective deubiquitinase USP30.
Nat. Struct. Mol. Biol., 24, 2017
6LVS
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BU of 6lvs by Molmil
USP14 catalytic domain mutant C114S
Descriptor: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, FORMIC ACID, ...
Authors:Lin, H.C, Lin, T.H, Chou, C.Y.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:USP14 catalytic domain mutant C114S
To Be Published
7SVS
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BU of 7svs by Molmil
Crystal structure analysis of the G73A mutant of Superoxide Dismutase from Trichoderma reesei
Descriptor: MANGANESE (II) ION, Superoxide dismutase
Authors:Mendoza Rengifo, E, Ferreira Jr, J.R, Garratt, C.R.
Deposit date:2021-11-19
Release date:2022-02-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Unexpected plasticity of the quaternary structure of iron-manganese superoxide dismutases.
J.Struct.Biol., 214, 2022
4MEM
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BU of 4mem by Molmil
Crystal Structure of the rat USP11 DUSP-UBL domains
Descriptor: Ubiquitin carboxyl-terminal hydrolase 11
Authors:Harper, S, Gratton, H.E, Cornaciu, I, Oberer, M, Scott, D.J, Emsley, J, Dreveny, I.
Deposit date:2013-08-27
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structure and Catalytic Regulatory Function of Ubiquitin Specific Protease 11 N-Terminal and Ubiquitin-like Domains.
Biochemistry, 53, 2014
4MEL
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BU of 4mel by Molmil
Crystal Structure of the human USP11 DUSP-UBL domains
Descriptor: Ubiquitin carboxyl-terminal hydrolase 11
Authors:Harper, S, Gratton, H.E, Cornaciu, I, Oberer, M, Scott, D.J, Emsley, J, Dreveny, I.
Deposit date:2013-08-27
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.899 Å)
Cite:Structure and Catalytic Regulatory Function of Ubiquitin Specific Protease 11 N-Terminal and Ubiquitin-like Domains.
Biochemistry, 53, 2014
6AQR
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BU of 6aqr by Molmil
SAGA DUB module Ubp8(C146A)/Sgf11/Sus1/Sgf73 bound to monoubiquitin
Descriptor: Polyubiquitin-C, SAGA-associated factor 11, SAGA-associated factor 73, ...
Authors:Morrow, M.E, Morgan, M.T, Wolberger, C.
Deposit date:2017-08-21
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Active site alanine mutations convert deubiquitinases into high-affinity ubiquitin-binding proteins.
EMBO Rep., 19, 2018
3HGM
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BU of 3hgm by Molmil
Universal Stress Protein TeaD from the TRAP transporter TeaABC of Halomonas elongata
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Universal Stress Protein TeaD
Authors:Schweikhard, E.S, Kuhlmann, S.I, Ziegler, C.M.
Deposit date:2009-05-14
Release date:2010-03-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and function of the universal stress protein TeaD and its role in regulating the ectoine transporter TeaABC of Halomonas elongata DSM 2581(T)
Biochemistry, 49, 2010
7AY1
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BU of 7ay1 by Molmil
Cryo-EM structure of USP1-UAF1 bound to mono-ubiquitinated FANCD2, and FANCI
Descriptor: DNA (61-MER), Fanconi anemia group D2 protein, Fanconi anemia group I protein, ...
Authors:Rennie, M.L, Arkinson, C, Walden, H.
Deposit date:2020-11-10
Release date:2021-03-24
Last modified:2022-07-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of FANCD2 deubiquitination by USP1-UAF1.
Nat.Struct.Mol.Biol., 28, 2021
8ITP
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BU of 8itp by Molmil
Crystal structure of USP47 catalytic domain complex with ubiquitin
Descriptor: Ubiquitin, Ubiquitin carboxyl-terminal hydrolase 47, ZINC ION
Authors:Kim, E.E, Shin, S.C.
Deposit date:2023-03-22
Release date:2024-03-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional characterization of USP47 reveals a hot spot for inhibitor design.
Commun Biol, 6, 2023
7ZH3
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BU of 7zh3 by Molmil
USP1 bound to ubiquitin conjugated to FANCD2 (focused refinement)
Descriptor: Ubiquitin carboxyl-terminal hydrolase 1, Ubiquitin-60S ribosomal protein L40, ZINC ION
Authors:Rennie, M.L, Walden, H.
Deposit date:2022-04-05
Release date:2022-10-12
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Cryo-EM reveals a mechanism of USP1 inhibition through a cryptic binding site.
Sci Adv, 8, 2022

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