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8EC0
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BU of 8ec0 by Molmil
III2IV respiratory supercomplex from Saccharomyces cerevisiae cardiolipin-lacking mutant
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, 5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL, ...
Authors:Hryc, C.F, Mileykovskaya, E, Baker, M, Dowhan, W.
Deposit date:2022-08-31
Release date:2023-05-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into cardiolipin replacement by phosphatidylglycerol in a cardiolipin-lacking yeast respiratory supercomplex.
Nat Commun, 14, 2023
8UC6
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BU of 8uc6 by Molmil
Calpain-7:IST1 Complex
Descriptor: Calpain-7, IST1 homolog
Authors:Paine, E, Whitby, F.G, Hill, C.P, Sunquist, W.I.
Deposit date:2023-09-25
Release date:2023-10-25
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:The Calpain-7 protease functions together with the ESCRT-III protein IST1 within the midbody to regulate the timing and completion of abscission.
Elife, 12, 2023
5NEK
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BU of 5nek by Molmil
Crystal structure of the polysaccharide deacetylase Bc1974 from Bacillus cereus in complex with acetazolamide
Descriptor: 5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE, ACETATE ION, Peptidoglycan N-acetylglucosamine deacetylase, ...
Authors:Andreou, A, Giastas, P, Eliopoulos, E.E.
Deposit date:2017-03-10
Release date:2018-02-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.057 Å)
Cite:Structures of the Peptidoglycan N-Acetylglucosamine Deacetylase Bc1974 and Its Complexes with Zinc Metalloenzyme Inhibitors.
Biochemistry, 57, 2018
7UVK
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BU of 7uvk by Molmil
G. haemolysans IgA1 protease
Descriptor: IgA1 Protease
Authors:Eisenmesser, E.Z, Zheng, H.
Deposit date:2022-05-02
Release date:2022-11-23
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:A substrate-induced gating mechanism is conserved among Gram-positive IgA1 metalloproteases.
Commun Biol, 5, 2022
8E7S
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BU of 8e7s by Molmil
III2IV2 respiratory supercomplex from Saccharomyces cerevisiae with 4 bound UQ6
Descriptor: (5S,11R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-4,6,10,12,16-pentaoxa-5,11-diphosphaoctadec-1-yl pentadecanoate, 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, 5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL, ...
Authors:Hryc, C.F, Mileykovskaya, E, Baker, M, Dowhan, W.
Deposit date:2022-08-24
Release date:2023-05-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into cardiolipin replacement by phosphatidylglycerol in a cardiolipin-lacking yeast respiratory supercomplex.
Nat Commun, 14, 2023
6ZWX
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BU of 6zwx by Molmil
Crystal structure of E. coli RNA helicase HrpA
Descriptor: ATP-dependent RNA helicase HrpA
Authors:Grass, L.M, Wollenhaupt, J, Barthel, T, Loll, B, Wahl, M.C.
Deposit date:2020-07-29
Release date:2021-06-30
Last modified:2021-08-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Large-scale ratcheting in a bacterial DEAH/RHA-type RNA helicase that modulates antibiotics susceptibility.
Proc.Natl.Acad.Sci.USA, 118, 2021
5N0L
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BU of 5n0l by Molmil
The structure of the cofactor binding GAF domain of the nutrient sensor CodY from Clostridium difficile
Descriptor: GTP-sensing transcriptional pleiotropic repressor CodY, ISOLEUCINE
Authors:Levdikov, V.M, Blagova, E.V, Wilkinson, A.J, Sonenshein, A.L.
Deposit date:2017-02-03
Release date:2018-02-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Impact of CodY protein on metabolism, sporulation and virulence in Clostridioides difficile ribotype 027.
Plos One, 14, 2019
7RNY
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BU of 7rny by Molmil
Carbonic Anhydrase II in complex with 3-ureido benzenesulfonamide derivative
Descriptor: 3-{[benzyl(methyl)carbamoyl]amino}benzene-1-sulfonamide, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Combs, J, McKenna, R.
Deposit date:2021-07-30
Release date:2022-06-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:One-Pot Procedure for the Synthesis of Asymmetric Substituted Ureido Benzene Sulfonamides as Effective Inhibitors of Carbonic Anhydrase Enzymes.
J.Med.Chem., 65, 2022
6QZ4
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BU of 6qz4 by Molmil
Structure of MHETase from Ideonella sakaiensis
Descriptor: CALCIUM ION, Mono(2-hydroxyethyl) terephthalate hydrolase, SULFATE ION
Authors:Allen, M.D, Johnson, C.W, Knott, B.C, Beckham, G.T, McGeehan, J.E.
Deposit date:2019-03-11
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Characterization and engineering of a two-enzyme system for plastics depolymerization.
Proc.Natl.Acad.Sci.USA, 117, 2020
7RNZ
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BU of 7rnz by Molmil
Carbonic Anhydrase II in complex with 4-ureido benzenesulfonamide derivative
Descriptor: 4-[(methylcarbamoyl)amino]benzene-1-sulfonamide, AZIDE ION, Carbonic anhydrase 2, ...
Authors:Combs, J, McKenna, R.
Deposit date:2021-07-30
Release date:2022-06-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:One-Pot Procedure for the Synthesis of Asymmetric Substituted Ureido Benzene Sulfonamides as Effective Inhibitors of Carbonic Anhydrase Enzymes.
J.Med.Chem., 65, 2022
6QN7
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BU of 6qn7 by Molmil
Structure of bovine anti-RSV hybrid Fab B4HC-B13LC
Descriptor: Heavy chain of bovine anti-RSV B4, Light chain of bovine anti-RSV B13
Authors:Ren, J, Nettleship, J.E, Harris, G, Mwangi, W, Rhaman, N, Grant, C, Kotecha, A, Fry, E, Charleston, B, Stuart, D.I, Hammond, J, Owens, R.J.
Deposit date:2019-02-10
Release date:2019-05-29
Last modified:2019-08-21
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The role of the light chain in the structure and binding activity of two cattle antibodies that neutralize bovine respiratory syncytial virus.
Mol.Immunol., 112, 2019
6CBQ
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BU of 6cbq by Molmil
Crystal structure of QscR bound to agonist S3
Descriptor: (2S)-2-hexyl-N-[(3S)-2-oxooxolan-3-yl]decanamide, LuxR family transcriptional regulator
Authors:Churchill, M.E.A, Wysoczynski-Horita, C.L.
Deposit date:2018-02-05
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanism of agonism and antagonism of the Pseudomonas aeruginosa quorum sensing regulator QscR with non-native ligands.
Mol. Microbiol., 108, 2018
6XKO
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BU of 6xko by Molmil
Class III PreQ1 riboswitch mutant A84G
Descriptor: 7-DEAZA-7-AMINOMETHYL-GUANINE, Class III PreQ1 riboswitch
Authors:Srivastava, K.Y, Jenkins, J.L, Wedekind, J.E.
Deposit date:2020-06-26
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:New insights into Class III PreQ1 metabolite binding
To Be Published
8DUL
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BU of 8dul by Molmil
Cryo-EM Structure of Antibody SKT05 in complex with Western Equine Encephalitis Virus spike (local refinement from VLP particles)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody Fab SKT05 heavy chain, ...
Authors:Cerutti, G, Verardi, R, Roederer, M, Shapiro, L.
Deposit date:2022-07-27
Release date:2023-07-05
Method:ELECTRON MICROSCOPY (4.17 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
8UWV
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BU of 8uwv by Molmil
Crystal structure of BT3984 SusD-like from Bacteroides thetaiotaomicron VPI-5482 at 1.1 A resolution (Space group P21)
Descriptor: BT3984 SusD-like, MAGNESIUM ION
Authors:Sastre, D.E, Navarro, M.V.A.S, Sundberg, E.J.
Deposit date:2023-11-08
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Crystal structure of BT3984 SusD-like from Bacteroides thetaiotaomicron VPI-5482 at 1.1 A resolution (Space group P21)
To Be Published
7R7O
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BU of 7r7o by Molmil
Structure of methyltransferase domain of Spb1 boudn to SAM
Descriptor: AdoMet-dependent rRNA methyltransferase SPB1, S-ADENOSYLMETHIONINE
Authors:Cruz, V.E, Sekulski, K, Peddada, N, Erzberger, J.P.
Deposit date:2021-06-25
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Post-catalytic rRNA binding by the DEAD-box ATPase Spb4 and methyltransferase Spb1 guide the late nucleolar assembly of 60S ribosomes
To Be Published
8Q8I
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BU of 8q8i by Molmil
AO75L in complex with a synthetic trisaccharide acceptor.
Descriptor: (2~{R},3~{S},4~{S},5~{S},6~{R})-2-[(2~{S},3~{R},4~{R},5~{S},6~{R})-5-[(2~{R},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-2-methyl-6-octoxy-3-oxidanyl-oxan-4-yl]oxy-6-methyl-oxane-3,4,5-triol, 1,2-ETHANEDIOL, BICINE, ...
Authors:Laugueri, M.E, Speciale, I, Gimeno, A, Sicheng, L, Poveda, A, Lowary, T, Van Etten J, L, Barbero, J, De Castro, C, Tonetti, M, Rojas A, L.
Deposit date:2023-08-18
Release date:2024-08-21
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:AO75L in complex with a synthetic trisaccharide acceptor.
To Be Published
7RRE
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BU of 7rre by Molmil
Carbonic Anhydrase II in complex with Beta-Galactose-2C
Descriptor: 2-[1-(1,1,3-trioxo-2,3-dihydro-1H-1lambda~6~,2-benzothiazol-6-yl)-1H-1,2,3-triazol-4-yl]ethyl beta-L-gulopyranoside, Carbonic anhydrase 2, GLYCEROL, ...
Authors:McKenna, R, Combs, J.E.
Deposit date:2021-08-09
Release date:2022-08-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Inhibition of Carbonic Anhydrase IX and Monocarboxylate Transporters 1 and 4 in breast cancer via novel inhibition with Beta-Galactose 2C
To Be Published
8E7P
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BU of 8e7p by Molmil
Staphylococcus aureus ClpP in complex with compound 3421
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (5R,6S,9aS)-N-benzyl-6-[(4-hydroxyphenyl)methyl]-8-[(naphthalen-1-yl)methyl]-4,7-dioxohexahydro-2H-pyrazino[1,2-a]pyrimidine-1(6H)-carboxamide, ATP-dependent Clp protease proteolytic subunit
Authors:Lee, R.E, Griffith, E.C.
Deposit date:2022-08-24
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Development of a high throughput and site specific, fluorescent polarization assay to screen for activators of Caseinolytic Protease P leads to the discovery of synthetically tractable new activator class
To Be Published
6XOR
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BU of 6xor by Molmil
Structure of the Self-Association Domain of Swallow
Descriptor: Protein swallow
Authors:Loening, N.M, Barbar, E.
Deposit date:2020-07-07
Release date:2021-03-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural characterization of the self-association domain of swallow.
Protein Sci., 30, 2021
6GXL
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BU of 6gxl by Molmil
The hit-and-return system enables efficient time-resolved serial synchrotron crystallography: RADDAM2
Descriptor: Fluoroacetate dehalogenase
Authors:Schulz, E.C, Mehrabi, P, Mueller-Werkmeister, H, Tellkamp, F, Stuart, W, Persch, E, De Gasparo, R, Diederich, F, Pai, E.F, Miller, R.J.D.
Deposit date:2018-06-27
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The hit-and-return system enables efficient time-resolved serial synchrotron crystallography.
Nat. Methods, 15, 2018
7R1T
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BU of 7r1t by Molmil
Crystal structure of SARS-CoV-2 nsp10/nsp16 in complex with the SS148 inhibitor
Descriptor: (2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-(4-azanyl-5-cyano-pyrrolo[2,3-d]pyrimidin-7-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid, 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Klima, M, Boura, E, Li, F, Yazdi, A.K, Vedadi, M.
Deposit date:2022-02-03
Release date:2022-06-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of SARS-CoV-2 nsp10-nsp16 in complex with small molecule inhibitors, SS148 and WZ16.
Protein Sci., 31, 2022
8UHF
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BU of 8uhf by Molmil
Cryo-EM of Vibrio cholerae toxin co-regulated pilus - asymmetric reconstruction
Descriptor: Toxin co-regulated pilin
Authors:Sonani, R.R, Kundra, S, Craig, L, Egelman, E.H.
Deposit date:2023-10-09
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Tad and toxin-coregulated pilus structures reveal unexpected diversity in bacterial type IV pili.
Proc.Natl.Acad.Sci.USA, 120, 2023
6PPW
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BU of 6ppw by Molmil
Crystal structure of NeuB, an N-acetylneuraminate synthase from Neisseria meningitidis, in complex with magnesium and malate
Descriptor: D-MALATE, MAGNESIUM ION, N-acetylneuraminate synthase
Authors:Rosanally, A.Z, Junop, M.S, Berti, P.J.
Deposit date:2019-07-08
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:NeuNAc Oxime: A Slow-Binding and Effectively Irreversible Inhibitor of the Sialic Acid Synthase NeuB.
Biochemistry, 58, 2019
7R1U
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BU of 7r1u by Molmil
Crystal structure of SARS-CoV-2 nsp10/nsp16 in complex with the WZ16 inhibitor
Descriptor: (2S,5S)-2,6-diamino-5-{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}hexanoic acid, 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Klima, M, Boura, E, Li, F, Yazdi, A.K, Vedadi, M.
Deposit date:2022-02-03
Release date:2022-06-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of SARS-CoV-2 nsp10-nsp16 in complex with small molecule inhibitors, SS148 and WZ16.
Protein Sci., 31, 2022

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PDB entries from 2024-10-16

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