Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5NC1
DownloadVisualize
BU of 5nc1 by Molmil
Structure of the distal domain of mouse adenovirus 2 fibre bound to N-acetyl-glucosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fiber, GLYCEROL, ...
Authors:Singh, A.K, van Raaij, M.J.
Deposit date:2017-03-03
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and N-acetylglucosamine binding of the distal domain of mouse adenovirus 2 fibre.
J. Gen. Virol., 99, 2018
3LQ0
DownloadVisualize
BU of 3lq0 by Molmil
Zymogen structure of crayfish astacin metallopeptidase
Descriptor: GLYCEROL, ProAstacin, SULFATE ION, ...
Authors:Guevara, T, Yiallouros, I, Kappelhoff, R, Bissdorf, S, Stocker, W, Gomis-Ruth, F.X.
Deposit date:2010-02-08
Release date:2010-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Proenzyme structure and activation of astacin metallopeptidase
J.Biol.Chem., 285, 2010
5N30
DownloadVisualize
BU of 5n30 by Molmil
Crystal structure of the V72I mutant of the mouse alpha-Dystroglycan N-terminal region
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Dystroglycan
Authors:Cassetta, A, Covaceuszach, S, Brancaccio, A, Sciandra, F, Bozzi, M, Bigotti, M.G, Konarev, P.V.
Deposit date:2017-02-08
Release date:2017-11-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The effect of the pathological V72I, D109N and T190M missense mutations on the molecular structure of alpha-dystroglycan.
PLoS ONE, 12, 2017
2TSR
DownloadVisualize
BU of 2tsr by Molmil
THYMIDYLATE SYNTHASE FROM RAT IN TERNARY COMPLEX WITH DUMP AND TOMUDEX
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE, TOMUDEX
Authors:Sotelo-Mundo, R.R, Ciesla, J, Dzik, J.M, Rode, W, Maley, F, Maley, G, Hardy, L.W, Montfort, W.R.
Deposit date:1998-06-19
Release date:1999-02-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of rat thymidylate synthase inhibited by Tomudex, a potent anticancer drug.
Biochemistry, 38, 1999
3IQ7
DownloadVisualize
BU of 3iq7 by Molmil
Crystal Structure of human Haspin in complex with 5-Iodotubercidin
Descriptor: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL, 1,2-ETHANEDIOL, IODIDE ION, ...
Authors:Filippakopoulos, P, Eswaran, J, Keates, T, Burgess-Brown, N, Fedorov, O, Pike, A.C.W, Von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2009-08-19
Release date:2009-09-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and functional characterization of the atypical human kinase haspin.
Proc.Natl.Acad.Sci.USA, 106, 2009
5NEU
DownloadVisualize
BU of 5neu by Molmil
Localised Reconstruction of Integrin alpha V beta 6 bound to Foot and Mouth Disease Virus O1 Manisa - Pose B.
Descriptor: CALCIUM ION, Capsid protein, Integrin alpha-V, ...
Authors:Kotecha, A, Stuart, D.
Deposit date:2017-03-11
Release date:2017-06-21
Last modified:2018-03-28
Method:ELECTRON MICROSCOPY (12.3 Å)
Cite:Rules of engagement between alpha v beta 6 integrin and foot-and-mouth disease virus.
Nat Commun, 8, 2017
1J2J
DownloadVisualize
BU of 1j2j by Molmil
Crystal structure of GGA1 GAT N-terminal region in complex with ARF1 GTP form
Descriptor: ADP-ribosylation factor 1, ADP-ribosylation factor binding protein GGA1, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Shiba, T, Kawasaki, M, Takatsu, H, Nogi, T, Matsugaki, N, Igarashi, N, Suzuki, M, Kato, R, Nakayama, K, Wakatsuki, S.
Deposit date:2003-01-05
Release date:2003-05-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular mechanism of membrane recruitment of GGA by ARF in lysosomal protein transport
NAT.STRUCT.BIOL., 10, 2003
2RVM
DownloadVisualize
BU of 2rvm by Molmil
Solution structure of the chromodomain of HP1alpha with the phosphorylated N-terminal tail
Descriptor: Chromobox protein homolog 5
Authors:Kawaguchi, A, Nishimura, Y.
Deposit date:2015-12-18
Release date:2016-03-16
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
5NOB
DownloadVisualize
BU of 5nob by Molmil
Crystal structure of human tankyrase 2 in complex with OD336
Descriptor: 1-[3-[4-(2-chlorophenyl)-5-pyrimidin-4-yl-1,2,4-triazol-3-yl]cyclobutyl]-2-oxidanylidene-3~{H}-benzimidazole-5-carbonitrile, Tankyrase-2, ZINC ION
Authors:Ignatev, A, Lehtio, L.
Deposit date:2017-04-11
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Discovery of a Novel Series of Tankyrase Inhibitors by a Hybridization Approach.
J. Med. Chem., 60, 2017
5N2M
DownloadVisualize
BU of 5n2m by Molmil
Crystal structure of the first bromodomain of human BRD4 in complex with a tetrahydroquinoline analogue
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, propan-2-yl ~{N}-[(2~{S},4~{R})-6-(3-acetamidophenyl)-1-ethanoyl-2-methyl-3,4-dihydro-2~{H}-quinolin-4-yl]carbamate
Authors:Tallant, C, Slavish, P.J, Siejka, P, Bharatham, N, Shadrick, W.R, Chai, S, Young, B.M, Boyd, V.A, Heroven, C, Wiggers, H.J, Picaud, S, Fedorov, O, Krojer, T, Chen, T, Lee, R.E, Guy, R.K, Shelat, A.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2017-02-07
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystal structure of the first bromodomain of human BRD4 in complex with a tetrahydroquinoline analogue
To Be Published
3IFQ
DownloadVisualize
BU of 3ifq by Molmil
Interction of plakoglobin and beta-catenin with desmosomal cadherins
Descriptor: E-cadherin, SULFATE ION, plakoglobin
Authors:Choi, H.-J, Gross, J.C, Pokutta, S, Weis, W.I.
Deposit date:2009-07-24
Release date:2009-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Interactions of plakoglobin and beta-catenin with desmosomal cadherins: basis of selective exclusion of alpha- and beta-catenin from desmosomes.
J.Biol.Chem., 284, 2009
3LHA
DownloadVisualize
BU of 3lha by Molmil
Crystal structure of mouse VPS26B(R240S/G241A/E242S) in spacegroup P41 21 2
Descriptor: Vacuolar protein sorting-associated protein 26B
Authors:Collins, B, Shaw, D, Norwood, S.
Deposit date:2010-01-21
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Assembly and solution structure of the core retromer protein complex.
Traffic, 12, 2011
3IHI
DownloadVisualize
BU of 3ihi by Molmil
Crystal structure of mouse thymidylate synthase
Descriptor: SULFATE ION, Thymidylate synthase
Authors:Dowiercial, A, Jarmula, A, Rypniewski, W.R, Sokolowska, M, Fraczyk, T, Ciesla, J, Rode, W.
Deposit date:2009-07-30
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Mouse thymidylate synthase does not show the inactive conformation, observed for the human enzyme
Struct Chem, 2016
3IF8
DownloadVisualize
BU of 3if8 by Molmil
Crystal Structure of ZWILCH, a member of the RZZ kinetochore complex
Descriptor: Protein zwilch homolog
Authors:Wehenkel, A, Civril, F, Musacchio, A.
Deposit date:2009-07-24
Release date:2010-06-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural analysis of the RZZ complex reveals common ancestry with multisubunit vesicle tethering machinery.
Structure, 18, 2010
2RQK
DownloadVisualize
BU of 2rqk by Molmil
NMR Solution Structure of Mesoderm Development (MESD) - closed conformation
Descriptor: Mesoderm development candidate 2
Authors:Koehler, C, Lighthouse, J.K, Werther, T, Andersen, O.M, Diehl, A, Schmieder, P, Holdener, B.C, Oschkinat, H.
Deposit date:2009-08-06
Release date:2009-08-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The Structure of MESD45-184 Brings Light into the Mechanism of LDLR Family Folding
Structure, 19, 2011
5MZM
DownloadVisualize
BU of 5mzm by Molmil
Structure of H-2Db in complex with TEIPP APL Trh4 p3P
Descriptor: Beta-2-microglobulin, Ceramide synthase 5 derived peptide Trh4 p3P, GLYCEROL, ...
Authors:Hafstrand, I, Achour, A, Sandalova, T.
Deposit date:2017-02-01
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Immunogenicity of a Proline-Substituted Altered Peptide Ligand toward the Cancer-Associated TEIPP Neoepitope Trh4 Is Unrelated to Complex Stability.
J. Immunol., 200, 2018
5NA7
DownloadVisualize
BU of 5na7 by Molmil
Structure of DPP III from Bacteroides thetaiotaomicron
Descriptor: CHLORIDE ION, Putative dipeptidyl-peptidase III, SULFATE ION, ...
Authors:Sabljic, I, Luic, M.
Deposit date:2017-02-27
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Crystal structure of dipeptidyl peptidase III from the human gut symbiont Bacteroides thetaiotaomicron.
PLoS ONE, 12, 2017
3II5
DownloadVisualize
BU of 3ii5 by Molmil
The Complex of wild-type B-RAF with Pyrazolo pyrimidine inhibitor
Descriptor: B-Raf proto-oncogene serine/threonine-protein kinase, N-[3-(3-{4-[(dimethylamino)methyl]phenyl}pyrazolo[1,5-a]pyrimidin-7-yl)phenyl]-3-(trifluoromethyl)benzamide, PHOSPHATE ION
Authors:Xu, W, Breger, D, Torres, N, Dutia, M, Powell, D, Ciszewski, G.
Deposit date:2009-07-31
Release date:2009-11-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Non-hinge-binding pyrazolo[1,5-a]pyrimidines as potent B-Raf kinase inhibitors.
Bioorg.Med.Chem.Lett., 19, 2009
2RT9
DownloadVisualize
BU of 2rt9 by Molmil
Solution structure of a regulatory domain of meiosis inhibitor
Descriptor: F-box only protein 43, ZINC ION
Authors:Shoji, S, Muto, Y, Ikeda, M, He, F, Tsuda, K, Ohsawa, N, Akasaka, R, Terada, T, Wakiyama, M, Shirouzu, M, Yokoyama, S.
Deposit date:2013-07-05
Release date:2014-07-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The zinc-binding region (ZBR) fragment of Emi2 can inhibit APC/C by targeting its association with the coactivator Cdc20 and UBE2C-mediated ubiquitylation
FEBS Open Bio, 4, 2014
2R51
DownloadVisualize
BU of 2r51 by Molmil
Crystal Structure of mouse Vps26B
Descriptor: Vacuolar protein sorting-associated protein 26B
Authors:Owen, D.J, Teasdale, R.D, Collins, B.M.
Deposit date:2007-09-02
Release date:2008-07-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of Vps26B and mapping of its interaction with the retromer protein complex.
Traffic, 9, 2008
2RVB
DownloadVisualize
BU of 2rvb by Molmil
Solution structure of the complex between XPC acidic domain and TFIIH p62 PH domain
Descriptor: DNA repair protein complementing XP-C cells, General transcription factor IIH subunit 1
Authors:Okuda, M, Nishimura, Y.
Deposit date:2015-07-01
Release date:2015-09-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural Insight into the Mechanism of TFIIH Recognition by the Acidic String of the Nucleotide Excision Repair Factor XPC.
Structure, 23, 2015
5N9G
DownloadVisualize
BU of 5n9g by Molmil
TFIIIB -TBP/Brf2/DNA and SANT domain of Bdp1-
Descriptor: DNA/RNA (25-MER), DNA/RNA (27-MER), SODIUM ION, ...
Authors:Gouge, J, Vannini, A, Guthertz, N.
Deposit date:2017-02-24
Release date:2017-06-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular mechanisms of Bdp1 in TFIIIB assembly and RNA polymerase III transcription initiation.
Nat Commun, 8, 2017
1J0G
DownloadVisualize
BU of 1j0g by Molmil
Solution Structure of Mouse Hypothetical 9.1 kDa Protein, A Ubiquitin-like Fold
Descriptor: Hypothetical Protein 1810045K17
Authors:Zhao, C, Kigawa, T, Koshiba, S, Tochio, N, Kobayashi, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-11-13
Release date:2003-12-09
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of Mouse Hypothetical 9.1 kDa Protein, A Ubiquitin-like Fold
To be Published
2RDA
DownloadVisualize
BU of 2rda by Molmil
Human Thymidylate Synthase Stabilized in Active Conformation by R163K Mutation: Asymmetry and Reactivity of Cys195
Descriptor: BETA-MERCAPTOETHANOL, PHOSPHATE ION, Thymidylate synthase
Authors:Gibson, L.M, Lovelace, L.L, Lebioda, L.
Deposit date:2007-09-21
Release date:2008-06-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:The R163K mutant of human thymidylate synthase is stabilized in an active conformation: structural asymmetry and reactivity of cysteine 195.
Biochemistry, 47, 2008
3I7O
DownloadVisualize
BU of 3i7o by Molmil
Crystal Structure of DDB1 in Complex with the H-Box Motif of IQWD1
Descriptor: DNA damage-binding protein 1, IQ motif and WD repeat-containing protein 1
Authors:Li, T, Robert, E.I, Breugel, P.C.V, Strubin, M, Zheng, N.
Deposit date:2009-07-08
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A promiscuous alpha-helical motif anchors viral hijackers and substrate receptors to the CUL4-DDB1 ubiquitin ligase machinery.
Nat.Struct.Mol.Biol., 17, 2010

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon