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PDB: 180 results

8WLS
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BU of 8wls by Molmil
Bcl-xL in complex with HBx BH3 delta C peptide
Descriptor: Bcl-2-like protein 1, Protein X
Authors:Kobayashi, N, Nagata, T, Kusunoki, H.
Deposit date:2023-10-01
Release date:2024-03-20
Method:SOLUTION NMR
Cite:Structural Insights into the Interaction between the C-Terminal-Deleted BH3-like Motif Peptide of Hepatitis B Virus X Protein and Bcl-x L.
Biochemistry, 63, 2024
7BQQ
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BU of 7bqq by Molmil
Solution NMR structure of fold-Z Gogy; de novo designed protein with an asymmetric all-alpha topology
Descriptor: Gogy
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N.
Deposit date:2020-03-25
Release date:2021-04-07
Last modified:2024-01-10
Method:SOLUTION NMR
Cite:Design of complicated all-alpha protein structures
Nat.Struct.Mol.Biol., 2024
7BQN
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BU of 7bqn by Molmil
Solution NMR structure of fold-C Rei; de novo designed protein with an asymmetric all-alpha topology
Descriptor: Rei
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N.
Deposit date:2020-03-25
Release date:2021-04-07
Last modified:2024-01-10
Method:SOLUTION NMR
Cite:Design of complicated all-alpha protein structures
Nat.Struct.Mol.Biol., 2024
7BQM
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BU of 7bqm by Molmil
Solution NMR structure of fold-0 Chantal; de novo designed protein with an asymmetric all-alpha topology
Descriptor: Chantal
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N.
Deposit date:2020-03-25
Release date:2021-04-07
Last modified:2024-01-10
Method:SOLUTION NMR
Cite:Design of complicated all-alpha protein structures
Nat.Struct.Mol.Biol., 2024
7BQS
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BU of 7bqs by Molmil
Solution NMR structure of fold-U Nomur; de novo designed protein with an asymmetric all-alpha topology
Descriptor: Nomur
Authors:Kobayashi, N, Nagashima, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N.
Deposit date:2020-03-25
Release date:2021-04-07
Last modified:2024-01-10
Method:SOLUTION NMR
Cite:Design of complicated all-alpha protein structures
Nat.Struct.Mol.Biol., 2024
7BQR
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BU of 7bqr by Molmil
Solution NMR structure of fold-K Mussoc; de novo designed protein with an asymmetric all-alpha topology
Descriptor: Mussoc
Authors:Kobayashi, N, Nagashima, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N.
Deposit date:2020-03-25
Release date:2021-04-07
Last modified:2024-01-10
Method:SOLUTION NMR
Cite:Design of complicated all-alpha protein structures
Nat.Struct.Mol.Biol., 2024
7XGA
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BU of 7xga by Molmil
NMR strucutre of chimeric protein for model of PHD-Stella complex
Descriptor: Chimera of E3 ubiquitin-protein ligase UHRF1 and Developmental pluripotency-associated protein 3, ZINC ION
Authors:Kobayashi, N, Konuma, T, Arita, K.
Deposit date:2022-04-04
Release date:2022-12-07
Last modified:2023-03-22
Method:SOLUTION NMR
Cite:Structural basis for the unique multifaceted interaction of DPPA3 with the UHRF1 PHD finger.
Nucleic Acids Res., 50, 2022
7BQE
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BU of 7bqe by Molmil
Solution NMR structure of NF3; de novo designed protein with a novel fold
Descriptor: NF3
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-24
Release date:2021-03-24
Last modified:2023-07-05
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
7BPM
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BU of 7bpm by Molmil
Solution NMR structure of NF2; de novo designed protein with a novel fold
Descriptor: NF2
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-23
Release date:2021-03-24
Last modified:2023-07-05
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
7BQD
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BU of 7bqd by Molmil
Solution NMR structure of NF8 (knot fold); de novo designed protein with a novel fold
Descriptor: NF8
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-24
Release date:2021-03-24
Last modified:2023-07-05
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
1IUR
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BU of 1iur by Molmil
DnaJ domain of human KIAA0730 protein
Descriptor: KIAA0730 protein
Authors:Kobayashi, N, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-03-07
Release date:2003-10-07
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of DnaJ domain of human KIAA0730 protein
To be published
6LLQ
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BU of 6llq by Molmil
Solution NMR structure of de novo Rossmann2x2 fold with most of the core mutated to valine, R2x2_VAL88
Descriptor: VAL88
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Koga, R, Yamamoto, M, Kosugi, T, Koga, N.
Deposit date:2019-12-23
Release date:2020-12-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Robust folding of a de novo designed ideal protein even with most of the core mutated to valine.
Proc.Natl.Acad.Sci.USA, 117, 2020
7BPP
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BU of 7bpp by Molmil
Solution NMR structure of NF5; de novo designed protein with a novel fold
Descriptor: NF5
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-23
Release date:2021-03-24
Last modified:2023-07-05
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
7BPL
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BU of 7bpl by Molmil
Solution NMR structure of NF1; de novo designed protein with a novel fold
Descriptor: NF1
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-23
Release date:2021-03-24
Last modified:2023-07-05
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
7BPN
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BU of 7bpn by Molmil
Solution NMR structure of NF7; de novo designed protein with a novel fold
Descriptor: NF7
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-23
Release date:2021-03-24
Last modified:2023-07-05
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
7BQC
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BU of 7bqc by Molmil
Solution NMR structure of NF4; de novo designed protein with a novel fold
Descriptor: NF4
Authors:Kobayashi, N, Nagashima, T, Minami, S, Koga, R, Chikenji, T, Koga, N.
Deposit date:2020-03-24
Release date:2021-03-24
Last modified:2023-07-05
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
7BQB
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BU of 7bqb by Molmil
Solution NMR structure of NF6; de novo designed protein with a novel fold
Descriptor: NF6
Authors:Kobayashi, N, Nagashima, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-24
Release date:2021-03-24
Last modified:2023-07-05
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
7D2O
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BU of 7d2o by Molmil
Solution structure of Gaussia Luciferase by NMR
Descriptor: Luciferase
Authors:Kobayashi, N, Wu, N, Kuroda, Y, Yamazaki, T.
Deposit date:2020-09-17
Release date:2020-12-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of Gaussia Luciferase with five disulfide bonds and identification of a putative coelenterazine binding cavity by heteronuclear NMR.
Sci Rep, 10, 2020
1UFG
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BU of 1ufg by Molmil
Solution structure of immunoglobulin like domain of mouse nuclear lamin
Descriptor: Lamin A
Authors:Kobayashi, N, Kigawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-05-29
Release date:2004-06-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of immunoglobulin like domain of mouse nuclear lamin
To be Published
1UFF
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BU of 1uff by Molmil
Solution structure of the first SH3 domain of human intersectin2 (KIAA1256)
Descriptor: Intersectin 2
Authors:Kobayashi, N, Kigawa, T, Koshiba, S, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-05-29
Release date:2003-11-29
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the first SH3 domain of human intersectin2 (KIAA1256)
To be Published
1WK1
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BU of 1wk1 by Molmil
Solution structure of Lectin C-type domain derived from a hypothetical protein from C. elegans
Descriptor: Hypothetical protein yk1067a12
Authors:Kobayashi, N, Koshiba, S, Inoue, M, Tochio, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-29
Release date:2004-11-29
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure of Lectin C-type domain derived from a hypothetical protein from C. elegans
To be Published
1WJZ
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BU of 1wjz by Molmil
Soluiotn structure of J-domain of mouse DnaJ like protein
Descriptor: 1700030A21Rik protein
Authors:Kobayashi, N, Koshiba, S, Inoue, M, Tochio, N, Tomizawa, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-29
Release date:2004-11-29
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Soluiotn structure of J-domain of mouse DnaJ like protein
To be Published
1WLM
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BU of 1wlm by Molmil
Solution structure of mouse CGI-38 protein
Descriptor: Protein CGI-38
Authors:Kobayashi, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-06-28
Release date:2005-07-12
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure of mouse CGI-38 protein
To be Published
1WK0
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BU of 1wk0 by Molmil
Solution structure of Fibronectin type III domain derived from human KIAA0970 protein
Descriptor: KIAA0970 protein
Authors:Kobayashi, N, Koshiba, S, Inoue, M, Hayashi, F, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-29
Release date:2004-11-29
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure of Fibronectin type III domain derived from human KIAA0970 protein
To be Published
2CTT
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BU of 2ctt by Molmil
Solution structure of zinc finger domain from human DnaJ subfamily A menber 3
Descriptor: DnaJ homolog subfamily A member 3, ZINC ION
Authors:Kobayashi, N, Tochio, N, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-24
Release date:2005-11-24
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of zinc finger domain from human DnaJ subfamily A menber 3
To be Published

218853

PDB entries from 2024-04-24

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