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5UTJ
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BU of 5utj by Molmil
Crystal Structure of TGT in complex with 2,6-dioxy-8-azapurine, 2,6-dioxy-8-azapurine, 2,6-dioxy-8-azapurine
Descriptor: 8-AZAXANTHINE, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Hassaan, E, Heine, A, Klebe, G.
Deposit date:2017-02-15
Release date:2018-03-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.549 Å)
Cite:Fragments as Novel Starting Points for tRNA-Guanine Transglycosylase Inhibitors Found by Alternative Screening Strategies.
Chemmedchem, 15, 2020
8VAW
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BU of 8vaw by Molmil
Magnesium catalyzed primer extension product with 14mer primer and mixed phosphorothioate activated G monomer
Descriptor: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, Magnesium catalyzed nonenzymatic RNA primer extension product
Authors:Fang, Z, Szostak, J.W.
Deposit date:2023-12-11
Release date:2024-04-17
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Catalytic Metal Ion-Substrate Coordination during Nonenzymatic RNA Primer Extension.
J.Am.Chem.Soc., 146, 2024
4DIN
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BU of 4din by Molmil
Novel Localization and Quaternary Structure of the PKA RI beta Holoenzyme
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Ilouz, R, Bubis, J, Wu, J, Yim, Y.Y, Deal, M.S, Kornev, A.P, Ma, Y, Blumenthal, D.K, Taylor, S.S.
Deposit date:2012-01-31
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Localization and quaternary structure of the PKA RI Beta holoenzyme
Proc.Natl.Acad.Sci.USA, 109, 2012
2BEX
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BU of 2bex by Molmil
Crystal structure of Placental Ribonuclease Inhibitor in complex with Human Eosinophil Derived Neurotoxin at 2A resolution
Descriptor: ALPHA-KETOMALONIC ACID, GLYCEROL, NONSECRETORY RIBONUCLEASE, ...
Authors:Iyer, S, Holloway, D.E, Kumar, K, Shapiro, R, Acharya, K.R.
Deposit date:2004-12-01
Release date:2005-03-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Molecular Recognition of Human Eosinophil-Derived Neurotoxin (Rnase 2) by Placental Ribonuclease Inhibitor
J.Mol.Biol., 347, 2005
6C3R
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BU of 6c3r by Molmil
Cricket paralysis virus RNAi suppressor protein CrPV-1A
Descriptor: Cricket paralysis virus 1A protein
Authors:Nayak, A, Kim, D.Y, Andino, R, Gross, J.
Deposit date:2018-01-10
Release date:2018-10-17
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Viral Protein Restricts Drosophila RNAi Immunity by Regulating Argonaute Activity and Stability.
Cell Host Microbe, 24, 2018
5SW3
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BU of 5sw3 by Molmil
Crystal Structure of TGT in complex with 3-Pyridinecarboxylic acid, 6-(dimethylamino)
Descriptor: 6-(dimethylamino)pyridine-3-carboxylic acid, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Hassaan, E, Heine, A, Klebe, G.
Deposit date:2016-08-08
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Fragments as Novel Starting Points for tRNA-Guanine Transglycosylase Inhibitors Found by Alternative Screening Strategies.
Chemmedchem, 15, 2020
5V3C
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BU of 5v3c by Molmil
Crystal structure of TGT in complex with 4-(aminomethane)cyclohexane-1-carboxylic acid
Descriptor: DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, Queuine tRNA-ribosyltransferase, ...
Authors:Hassaan, E, Heine, A, Klebe, G.
Deposit date:2017-03-07
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.419 Å)
Cite:Fragments as Novel Starting Points for tRNA-Guanine Transglycosylase Inhibitors Found by Alternative Screening Strategies.
Chemmedchem, 15, 2020
2WK4
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BU of 2wk4 by Molmil
Dimeric structure of D347G D348G mutant of the sapporovirus RNA dependent RNA polymerase
Descriptor: GLYCEROL, PROTEASE-POLYMERASE P70
Authors:Fullerton, S.W.B, Robel, I, Schuldt, L, Gebhardt, J, Tucker, P.A, Rohayem, J.
Deposit date:2009-06-05
Release date:2010-09-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Dimeric Structure of D347G D348G Mutant of the Sapporovirus Sapporovirus RNA Dependent RNA Polymerase
To be Published
5ZH4
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BU of 5zh4 by Molmil
CRYSTAL STRUCTURE OF PfKRS WITH INHIBITOR CLADO-7
Descriptor: (3R)-6,8-dihydroxy-3-{[(2S,6R)-6-methyloxan-2-yl]methyl}-3,4-dihydro-1H-2-benzopyran-1-one, CHLORIDE ION, LYSINE, ...
Authors:Babbar, P, Malhotra, N, Sharma, M, Harlos, K, Reddy, D.S, Manickam, Y, Sharma, A.
Deposit date:2018-03-11
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Specific Stereoisomeric Conformations Determine the Drug Potency of Cladosporin Scaffold against Malarial Parasite
J. Med. Chem., 61, 2018
5UTI
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BU of 5uti by Molmil
Crystal Structure of TGT in complex with fragment in preQ1 pocket
Descriptor: DIMETHYL SULFOXIDE, L-CANAVANINE, Queuine tRNA-ribosyltransferase, ...
Authors:Hassaan, E, Heine, A, Klebe, G.
Deposit date:2017-02-15
Release date:2018-03-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Fragments as Novel Starting Points for tRNA-Guanine Transglycosylase Inhibitors Found by Alternative Screening Strategies.
Chemmedchem, 15, 2020
5ZH3
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BU of 5zh3 by Molmil
CRYSTAL STRUCTURE OF PfKRS WITH INHIBITOR CLADO-6
Descriptor: (3S)-6,8-dihydroxy-3-{[(2R,6R)-6-methyloxan-2-yl]methyl}-3,4-dihydro-1H-2-benzopyran-1-one, LYSINE, Lysine-tRNA ligase
Authors:Babbar, P, Malhotra, N, Sharma, M, Harlos, K, Reddy, D.S, Manickam, Y, Sharma, A.
Deposit date:2018-03-11
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Specific Stereoisomeric Conformations Determine the Drug Potency of Cladosporin Scaffold against Malarial Parasite
J. Med. Chem., 61, 2018
5ZH5
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BU of 5zh5 by Molmil
CRYSTAL STRUCTURE OF PfKRS WITH INHIBITOR CLADO-2
Descriptor: (3S)-6,8-dihydroxy-3-{[(2R,6S)-6-methyloxan-2-yl]methyl}-3,4-dihydro-1H-2-benzopyran-1-one, CHLORIDE ION, LYSINE, ...
Authors:Babbar, P, Malhotra, N, Sharma, M, Harlos, K, Reddy, D.S, Manickam, Y, Sharma, A.
Deposit date:2018-03-11
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Specific Stereoisomeric Conformations Determine the Drug Potency of Cladosporin Scaffold against Malarial Parasite
J. Med. Chem., 61, 2018
2W4Y
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BU of 2w4y by Molmil
Caulobacter bacteriophage 5 - virus-like particle
Descriptor: ADENOSINE MONOPHOSPHATE, CALCIUM ION, CAULOBACTER 5 VIRUS-LIKE PARTICLE
Authors:Plevka, P, Kazaks, A, Dishlers, A, Liljas, L, Tars, K.
Deposit date:2008-12-02
Release date:2009-07-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Structure of Bacteriophage Phicb5 Reveals a Role of the RNA Genome and Metal Ions in Particle Stability and Assembly.
J.Mol.Biol., 391, 2009
5ZH2
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BU of 5zh2 by Molmil
CRYSTAL STRUCTURE OF PfKRS WITH INHIBITOR CLADO-5
Descriptor: (3R)-6,8-dihydroxy-3-{[(2R,6R)-6-methyloxan-2-yl]methyl}-3,4-dihydro-1H-2-benzopyran-1-one, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, CHLORIDE ION, ...
Authors:Babbar, P, Malhotra, N, Sharma, M, Harlos, K, Reddy, D.S, Manickam, Y, Sharma, A.
Deposit date:2018-03-11
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Specific Stereoisomeric Conformations Determine the Drug Potency of Cladosporin Scaffold against Malarial Parasite
J. Med. Chem., 61, 2018
1TBK
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BU of 1tbk by Molmil
NMR structure of the VS ribozyme stem-loop V RNA in the absence of multivalent ions.
Descriptor: VS ribozyme stem-loop V
Authors:Campbell, D.O, Legault, P.
Deposit date:2004-05-20
Release date:2005-03-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Nuclear Magnetic Resonance Structure of the Varkud Satellite Ribozyme Stem-Loop V RNA and Magnesium-Ion Binding from Chemical-Shift Mapping
Biochemistry, 44, 2005
5H7E
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BU of 5h7e by Molmil
Crystal Structure of native drCPDase
Descriptor: GLYCEROL, RNA 2',3'-cyclic phosphodiesterase, SULFATE ION
Authors:Han, W, Hua, Y, Zhao, Y.
Deposit date:2016-11-18
Release date:2017-09-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the RNA 2',3'-cyclic phosphodiesterase from Deinococcus radiodurans
Acta Crystallogr F Struct Biol Commun, 73, 2017
1VLR
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BU of 1vlr by Molmil
Crystal structure of mRNA decapping enzyme (DcpS) from Mus musculus at 1.83 A resolution
Descriptor: 1,2-ETHANEDIOL, mRNA decapping enzyme
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-08-10
Release date:2004-08-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of an Apo mRNA decapping enzyme (DcpS) from Mouse at 1.83 A resolution.
Proteins, 60, 2005
2XMA
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BU of 2xma by Molmil
DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE RIGHT END DNA COMPLEX
Descriptor: DRA2 TRANSPOSASE RIGHT END RECOGNITION SITE, MAGNESIUM ION, TRANSPOSASE
Authors:Hickman, A.B, James, J.A, Barabas, O, Pasternak, C, Ton-Hoang, B, Chandler, M, Sommer, S, Dyda, F.
Deposit date:2010-07-26
Release date:2010-10-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:DNA Recognition and the Precleavage State During Single-Stranded DNA Transposition in D. Radiodurans.
Embo J., 29, 2010
1DXN
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BU of 1dxn by Molmil
The Solution Structure of [d(CGC)r(aaa)d(TTTGCG)]2: Hybrid Junctions Flanked by DNA Duplexes
Descriptor: DNA/RNA (5'-D(*CP*GP*CP)-R(*AP*AP*AP)-D(*TP*TP*TP*GP*CP*G)-3')
Authors:Hsu, S.-T, Chou, M.-T, Cheng, J.-W.
Deposit date:2000-01-11
Release date:2000-04-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Hydration of [D(Cgc)R(Aaa)D(Tttgcg)]2
J.Mol.Biol., 295, 2000
3H5X
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BU of 3h5x by Molmil
Crystal Structure of 2'-amino-2'-deoxy-cytidine-5'-triphosphate bound to Norovirus GII RNA polymerase
Descriptor: 2'-amino-2'-deoxycytidine 5'-(tetrahydrogen triphosphate), 5'-R(*UP*GP*CP*CP*CP*GP*GP*G)-3', 5'-R(P*UP*GP*CP*CP*CP*GP*GP*GP*C)-3', ...
Authors:Zamyatkin, D.F, Parra, F, Machin, A, Grochulski, P, Ng, K.K.S.
Deposit date:2009-04-22
Release date:2009-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Binding of 2'-amino-2'-deoxycytidine-5'-triphosphate to norovirus polymerase induces rearrangement of the active site.
J.Mol.Biol., 390, 2009
8Q3I
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BU of 8q3i by Molmil
Mycobacterium smegmatis RNA polymerase in complex with HelD, SigA and RbpA in State I
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Koval, T, Krasny, L, Dohnalek, J, Kouba, T.
Deposit date:2023-08-04
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Molecular insights into RNA polymerase recycling by mycobacterial HelD
To Be Published
6ZXW
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BU of 6zxw by Molmil
Structure of Archaeoglobus fulgidus Trm11-Trm112 m2G10 tRNA methyltransferase complex bound to sinefungin
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, SINEFUNGIN, ...
Authors:Graille, M, Wang, C.
Deposit date:2020-07-30
Release date:2020-09-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Functional and structural characterization of the Trm11-Trm112 m2G10 tRNA methyltransferase complex
Nucleic Acids Res., 2020
6ZXV
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BU of 6zxv by Molmil
Structure of Archaeoglobus fulgidus Trm11 m2G10 tRNA methyltransferase enzyme bound to sinefungin
Descriptor: 1,2-ETHANEDIOL, SINEFUNGIN, tRNA (Guanine(10)-N2)-dimethyltransferase
Authors:Graille, M, Wang, C.
Deposit date:2020-07-30
Release date:2020-09-23
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Functional and structural characterization of the Trm11-Trm112 m2G10 tRNA methyltransferase complex
Nucleic Acids Res., 2020
6ZXY
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BU of 6zxy by Molmil
Structure of Archaeoglobus fulgidus Trm11 m2G10 tRNA methyltransferase enzyme
Descriptor: 1,2-ETHANEDIOL, tRNA (Guanine(10)-N2)-dimethyltransferase
Authors:Graille, M, Wang, C.
Deposit date:2020-07-30
Release date:2020-09-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Functional and structural characterization of the Trm11-Trm112 m2G10 tRNA methyltransferase complex
Nucleic Acids Res.
6JJI
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BU of 6jji by Molmil
Crystal structure of a two-quartet RNA parallel G-quadruplex complexed with the porphyrin TMPyP4 (1:1)
Descriptor: (1Z,4Z,9Z,15Z)-5,10,15,20-tetrakis(1-methylpyridin-1-ium-4-yl)-21,23-dihydroporphyrin, POTASSIUM ION, RNA (5'-R(*GP*GP*CP*UP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3')
Authors:Zhang, Y.S, Parkinson, G.N, Wei, D.G.
Deposit date:2019-02-25
Release date:2020-02-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Native de novo structural determinations of non-canonical nucleic acid motifs by X-ray crystallography at long wavelengths.
Nucleic Acids Res., 48, 2020

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