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1XH6
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BU of 1xh6 by Molmil
Crystal Structures of Protein Kinase B Selective Inhibitors in Complex with Protein Kinase A and Mutants
Descriptor: N-(4-{[4-(2-HYDROXY-5-PIPERIDIN-1-YLBENZOYL)BENZOYL]AMINO}AZEPAN-3-YL)ISONICOTINAMIDE, cAMP-dependent protein kinase inhibitor, alpha form, ...
Authors:Breitenlechner, C.B, Friebe, W.-G, Brunet, E, Werner, G, Graul, K, Thomas, U, Kuenkele, K.-P, Schaefer, W, Gassel, M, Bossemeyer, D, Huber, R, Engh, R.A, Masjost, B.
Deposit date:2004-09-17
Release date:2005-09-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design and crystal structures of protein kinase B-selective inhibitors in complex with protein kinase A and mutants
J.Med.Chem., 48, 2005
7ZLQ
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BU of 7zlq by Molmil
Crystal structure of ADAR1-dsRBD3 dimer in complex with dsRNA
Descriptor: Double-stranded RNA-specific adenosine deaminase, RNA (5'-R(*CP*GP*AP*AP*GP*CP*CP*UP*UP*CP*GP*CP*G)-3')
Authors:Mboukou, A, Barraud, P.
Deposit date:2022-04-15
Release date:2023-10-25
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Dimerization of ADAR1 modulates site-specificity of RNA editing
Nat Commun, 15, 2024
6U69
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BU of 6u69 by Molmil
Crystal structure of Yck2 from Candida albicans, apoenzyme
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-08-29
Release date:2019-10-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Overcoming Fungal Echinocandin Resistance through Inhibition of the Non-essential Stress Kinase Yck2.
Cell Chem Biol, 27, 2020
2BRG
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BU of 2brg by Molmil
Structure-based Design of Novel Chk1 Inhibitors: Insights into Hydrogen Bonding and Protein-Ligand Affinity
Descriptor: (5,6-DIPHENYL-FURO[2,3-D]PYRIMIDIN-4-YLAMINO)-ACETIC, SERINE/THREONINE-PROTEIN KINASE CHK1
Authors:Foloppe, N, Fisher, L.M, Howes, R, Kierstan, P, Potter, A, Robertson, A.G.S, Surgenor, A.E.
Deposit date:2005-05-05
Release date:2005-05-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-Based Design of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding and Protein-Ligand Affinity.
J.Med.Chem., 48, 2005
7ZJ1
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BU of 7zj1 by Molmil
Crystal structure of ADAR1-dsRBD3 dimer
Descriptor: Double-stranded RNA-specific adenosine deaminase
Authors:Mboukou, A, Barraud, P.
Deposit date:2022-04-08
Release date:2023-10-25
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Dimerization of ADAR1 modulates site-specificity of RNA editing
Nat Commun, 15, 2024
2BR1
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BU of 2br1 by Molmil
Structure-based Design of Novel Chk1 Inhibitors: Insights into Hydrogen Bonding and Protein-Ligand Affinity
Descriptor: 2-[5,6-BIS-(4-METHOXY-PHENYL)-FURO[2,3-D]PYRIMIDIN-4-YLAMINO]-ETHANOL, SERINE/THREONINE-PROTEIN KINASE CHK1, SULFATE ION
Authors:Foloppe, N, Fisher, L.M, Howes, R, Kierstan, P, Potter, A, Robertson, A.G.S, Surgenor, A.E.
Deposit date:2005-04-29
Release date:2005-05-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-Based Design of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding and Protein-Ligand Affinity.
J.Med.Chem., 48, 2005
2BRM
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BU of 2brm by Molmil
Structure-based Design of Novel Chk1 Inhibitors: Insights into Hydrogen Bonding and Protein-Ligand Affinity
Descriptor: 3-AMINO-3-BENZYL-[4.3.0]BICYCLO-1,6-DIAZANONAN-2-ONE, SERINE/THREONINE-PROTEIN KINASE CHK1
Authors:Foloppe, N, Fisher, L.M, Howes, R, Kierstan, P, Potter, A, Robertson, A.G.S, Surgenor, A.E.
Deposit date:2005-05-09
Release date:2005-05-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-Based Design of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding and Protein-Ligand Affinity.
J.Med.Chem., 48, 2005
6XHC
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BU of 6xhc by Molmil
Structure of glycinyl 5'-O-adenosine phosphoramidate
Descriptor: 2-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]amino]ethanoic acid, Ribonuclease pancreatic
Authors:Pallan, P.S, Egli, M.
Deposit date:2020-06-18
Release date:2020-12-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Enzyme-Free Release of Nucleotides from Phosphoramidates Depends Strongly on the Amino Acid.
Angew.Chem.Int.Ed.Engl., 59, 2020
6U7M
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BU of 6u7m by Molmil
Cryo-EM Structure of Helical Lipoprotein Lipase
Descriptor: Lipoprotein lipase
Authors:Gunn, K.H, Wang, F, Egelman, E.H, Neher, S.B.
Deposit date:2019-09-03
Release date:2020-04-08
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The structure of helical lipoprotein lipase reveals an unexpected twist in lipase storage.
Proc.Natl.Acad.Sci.USA, 117, 2020
6WUR
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BU of 6wur by Molmil
Crystal structure of PRL-2 phosphatase C101D mutant in complex with the Bateman domain of CNNM3 magnesium transporter
Descriptor: Metal transporter CNNM3, Protein tyrosine phosphatase type IVA 2, SODIUM ION
Authors:Kozlov, G, Gehring, K.
Deposit date:2020-05-05
Release date:2020-07-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.882 Å)
Cite:Crystal structure of PRL phosphatase C104D mutant in complex with the Bateman domain of CNNM magnesium transporter
J.Biol.Chem., 2020
9HMN
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BU of 9hmn by Molmil
CryoEM structure of human 20S proteasome in complex with proteasome inhibitor Salinosporamid A
Descriptor: (3AR,6R,6AS)-6-((S)-((S)-CYCLOHEX-2-ENYL)(HYDROXY)METHYL)-6A-METHYL-4-OXO-HEXAHYDRO-2H-FURO[3,2-C]PYRROLE-6-CARBALDEHYDE, Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, ...
Authors:Suelzen, H, Boura, E, Silhan, J.
Deposit date:2024-12-09
Release date:2025-03-05
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Structural insights into Salinosporamide A mediated inhibition of the human 20S proteasome.
Biorxiv, 2025
9CQC
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BU of 9cqc by Molmil
The ligation complex like in the NHEJ pathway
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (34-MER), DNA (35-MER), ...
Authors:Li, J, Liu, L, Gellert, M, Yang, W.
Deposit date:2024-07-19
Release date:2025-04-23
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The ligation complex like in the NHEJ pathway
To Be Published
1XMO
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BU of 1xmo by Molmil
Crystal Structure of mnm5U34t6A37-tRNALysUUU Complexed with AAG-mRNA in the Decoding Center
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Murphy, F.V, Ramakrishnan, V, Malkiewicz, A, Agris, P.F.
Deposit date:2004-10-04
Release date:2004-12-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:The role of modifications in codon discrimination by tRNA(Lys)(UUU).
Nat.Struct.Mol.Biol., 11, 2004
6U8N
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BU of 6u8n by Molmil
Human IMPDH2 treated with ATP, IMP, and NAD+. Fully extended filament segment reconstruction.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase 2, ...
Authors:Johnson, M.C, Kollman, J.M.
Deposit date:2019-09-05
Release date:2020-03-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6WTT
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BU of 6wtt by Molmil
Crystals Structure of the SARS-CoV-2 (COVID-19) main protease with inhibitor GC-376
Descriptor: (1R,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase, ...
Authors:Sacco, M, Ma, C, Chen, Y, Wang, J.
Deposit date:2020-05-03
Release date:2020-05-20
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Boceprevir, GC-376, and calpain inhibitors II, XII inhibit SARS-CoV-2 viral replication by targeting the viral main protease.
Cell Res., 30, 2020
6XP7
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BU of 6xp7 by Molmil
Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase
Authors:Nguyen, S, Bruning, J.B.
Deposit date:2020-07-08
Release date:2020-11-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Nucleoside selectivity of Aspergillus fumigatus nucleoside-diphosphate kinase.
Febs J., 288, 2021
2BFL
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BU of 2bfl by Molmil
Bacillus cereus metallo-beta-lactamase (BcII) Arg (121) Cys mutant. Solved at pH5 using 20mM ZnSO4 in buffer. 1mM DTT was used as a reducing agent.
Descriptor: AZIDE ION, GLYCEROL, Metallo-beta-lactamase type 2, ...
Authors:Davies, A.M, Rasia, R.M, Vila, A.J, Sutton, B.J, Fabiane, S.M.
Deposit date:2004-12-08
Release date:2005-03-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Effect of Ph on the Active Site of an Arg121Cys Mutant of the Metallo-Beta-Lactamase from Bacillus Cereus: Implications for the Enzyme Mechanism
Biochemistry, 44, 2005
6XPI
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BU of 6xpi by Molmil
CutR flat hexamer, form 1
Descriptor: Ethanolamine utilization protein EutS
Authors:Ochoa, J.M, Sawaya, M.R, Nguyen, V.N, Duilio, C, Yeates, T.O.
Deposit date:2020-07-08
Release date:2020-07-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Symmetry breaking and structural polymorphism in a bacterial microcompartment shell protein for choline utilization.
Protein Sci., 29, 2020
1XR1
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BU of 1xr1 by Molmil
Crystal structure of hPim-1 kinase in complex with AMP-PNP at 2.1 A Resolution
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Proto-oncogene serine/threonine-protein kinase Pim-1
Authors:Qian, K.C, Wang, L, Hickey, E.R, Studts, J, Barringer, K, Peng, C, Kronkaitis, A, Li, J, White, A, Mische, S, Farmer, B.
Deposit date:2004-10-13
Release date:2004-11-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis of Constitutive Activity and a Unique Nucleotide Binding Mode of Human Pim-1 Kinase.
J.Biol.Chem., 280, 2005
8F25
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BU of 8f25 by Molmil
Cryo-EM structure of Lumazine synthase nanoparticle linked to VP8* antigen
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase
Authors:Mangala Prasad, V, Lee, K.K.
Deposit date:2022-11-07
Release date:2023-04-12
Last modified:2024-01-10
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:mRNA-based VP8* nanoparticle vaccines against rotavirus are highly immunogenic in rodents.
Npj Vaccines, 8, 2023
9CQ6
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BU of 9cq6 by Molmil
The ligation complex in the NHEJ pathway
Descriptor: ADENOSINE MONOPHOSPHATE, DNA (34-MER), DNA (36-MER), ...
Authors:Li, J, Liu, L, Gellert, M, Yang, W.
Deposit date:2024-07-19
Release date:2025-04-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The ligation complex I in the NHEJ pathway
To Be Published
2BJE
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BU of 2bje by Molmil
Acylphosphatase from Sulfolobus solfataricus. Monclinic P21 space group
Descriptor: ACYLPHOSPHATASE, CHLORIDE ION, SULFATE ION
Authors:Rosano, C, Zuccotti, S.
Deposit date:2005-02-02
Release date:2005-11-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure, Conformational Stability, and Enzymatic Properties of Acylphosphatase from the Hyperthermophile Sulfolobus Solfataricus.
Proteins: Struct., Funct., Bioinf., 62, 2006
6XPJ
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BU of 6xpj by Molmil
CutR flat hexamer, form 2
Descriptor: Ethanolamine utilization protein EutS, SULFATE ION
Authors:Ochoa, J.M, Sawaya, M.R, Nguyen, V.N, Duilio, C, Yeates, T.O.
Deposit date:2020-07-08
Release date:2020-07-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Symmetry breaking and structural polymorphism in a bacterial microcompartment shell protein for choline utilization.
Protein Sci., 29, 2020
6XPU
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BU of 6xpu by Molmil
Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to IDP
Descriptor: INOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase
Authors:Nguyen, S, Bruning, J.B.
Deposit date:2020-07-09
Release date:2020-11-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Nucleoside selectivity of Aspergillus fumigatus nucleoside-diphosphate kinase.
Febs J., 288, 2021
6ZKS
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BU of 6zks by Molmil
Deactive complex I, open1
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ADENOSINE MONOPHOSPHATE, ...
Authors:Kampjut, D, Sazanov, L.A.
Deposit date:2020-06-30
Release date:2020-10-07
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The coupling mechanism of mammalian respiratory complex I.
Science, 370, 2020

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