PDB: 72308 resultsInfo pagesStatus searchChemie searchBIRD

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5WQE	Crystal structure of Alicyclobacillus acidoterrestris C2c1 in complex with single-guide RNA at 3.1 Angstrom resolution Descriptor: CRISPR-associated endonuclease C2c1, RNA (60-MER) Authors: Liu, L, Wang, Y.L. Deposit date: 2016-11-26 Release date: 2017-01-25 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (3.126 Å) Cite: C2c1-sgRNA Complex Structure Reveals RNA-Guided DNA Cleavage Mechanism Mol. Cell, 65, 2017
1B70	PHENYLALANYL TRNA SYNTHETASE COMPLEXED WITH PHENYLALANINE Descriptor: MAGNESIUM ION, PHENYLALANINE, PHENYLALANYL-TRNA SYNTHETASE Authors: Reshetnikova, L, Moor, N, Lavrik, O, Vassylyev, D.G. Deposit date: 1999-01-26 Release date: 2000-02-09 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Crystal structures of phenylalanyl-tRNA synthetase complexed with phenylalanine and a phenylalanyl-adenylate analogue J.Mol.Biol., 287, 1999
7CV1	Structure of human tRNAHis guanylyltransferase (Thg1) in the presence of human mitochondrial tRNAHis Descriptor: Probable tRNA(His) guanylyltransferase Authors: Nakamura, A, Wang, D, Komatsu, Y. Deposit date: 2020-08-25 Release date: 2021-04-07 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (4 Å) Cite: Analysis of GTP addition in the reverse (3'-5') direction by human tRNA His guanylyltransferase. Rna, 27, 2021
1B7Y	PHENYLALANYL TRNA SYNTHETASE COMPLEXED WITH PHENYLALANINYL-ADENYLATE Descriptor: ADENOSINE-5'-[PHENYLALANINOL-PHOSPHATE], MAGNESIUM ION, PROTEIN (PHENYLALANYL-TRNA SYNTHETASE) Authors: Reshetnikova, L, Moor, N, Lavrik, O, Vassylyev, D.G. Deposit date: 1999-01-26 Release date: 2000-01-26 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal structures of phenylalanyl-tRNA synthetase complexed with phenylalanine and a phenylalanyl-adenylate analogue. J.Mol.Biol., 287, 1999
4G0A	Crystallographic Analysis of Rotavirus NSP2-RNA Complex Reveals Specific Recognition of 5'-GG Sequence for RTPase activity Descriptor: CHLORIDE ION, Non-structural protein 2, RNA (5'-R(P*GP*GP*U)-3'), ... Authors: Hu, L, Prasad, B.V.V. Deposit date: 2012-07-09 Release date: 2012-08-22 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.0995 Å) Cite: Crystallographic Analysis of Rotavirus NSP2-RNA Complex Reveals Specific Recognition of 5' GG Sequence for RTPase Activity. J.Virol., 86, 2012
161D	A SINGLE 2'-HYDROXYL GROUP CONVERTS B-DNA TO A-DNA: CRYSTAL STRUCTURE OF THE DNA-RNA CHIMERIC DECAMER DUPLEX D(CCGGC)R(G)D(CCGG) WITH A NOVEL INTERMOLECULAR G.C BASE-PAIRED QUADRUPLET Descriptor: DNA/RNA (5'-D(*CP*CP*GP*GP*CP*)-R(*GP*)-D(*CP*CP*GP*G)-3') Authors: Ban, C, Ramakrishnan, B, Sundaralingam, M. Deposit date: 1994-02-10 Release date: 1994-05-18 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.9 Å) Cite: A single 2'-hydroxyl group converts B-DNA to A-DNA. Crystal structure of the DNA-RNA chimeric decamer duplex d(CCGGC)r(G)d(CCGG) with a novel intermolecular G-C base-paired quadruplet. J.Mol.Biol., 236, 1994
2ANR	Crystal structure (II) of Nova-1 KH1/KH2 domain tandem with 25nt RNA hairpin Descriptor: 5'-R(*CP*(5BU)P*CP*GP*CP*GP*GP*AP*UP*CP*AP*GP*UP*CP*AP*CP*CP*CP*AP*AP*GP*CP*GP*AP*G)-3', MAGNESIUM ION, POTASSIUM ION, ... Authors: Malinina, L, Teplova, M, Musunuru, K, Teplov, A, Darnell, J.C, Burley, S.K, Darnell, R.B, Patel, D.J. Deposit date: 2005-08-11 Release date: 2006-10-24 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.94 Å) Cite: Protein-RNA and protein-protein recognition by dual KH1/2 domains of the neuronal splicing factor Nova-1. Structure, 19, 2011
4HOU	Crystal Structure of N-terminal Human IFIT1 Descriptor: Interferon-induced protein with tetratricopeptide repeats 1 Authors: Abbas, Y.M, Pichlmair, A, Gorna, M.W, Superti-Furga, G, Nagar, B. Deposit date: 2012-10-22 Release date: 2013-01-30 Last modified: 2013-02-27 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural basis for viral 5'-PPP-RNA recognition by human IFIT proteins. Nature, 494, 2013
5IPP	Structure of Bacillus NanoRNase A active site mutant bound to a mononucleotide Descriptor: ADENOSINE MONOPHOSPHATE, Bifunctional oligoribonuclease and PAP phosphatase NrnA Authors: Schmier, B.J, Nelersa, C.M, Malhotra, A. Deposit date: 2016-03-09 Release date: 2017-08-02 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural Basis for the Bidirectional Activity of Bacillus nanoRNase NrnA. Sci Rep, 7, 2017
2ZY6	Crystal structure of a truncated tRNA, TPHE39A Descriptor: CALCIUM ION, CHLORIDE ION, MAGNESIUM ION, ... Authors: Tanaka, I, Yao, M, Tanaka, Y, Kitago, Y, Ymagata, S. Deposit date: 2009-01-14 Release date: 2009-06-30 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Deduced RNA binding mechanism of ThiI based on structural and binding analyses of a minimal RNA ligand Rna, 15, 2009
5J21	Structure of Bacillus NanoRNase A (WT) Descriptor: Bifunctional oligoribonuclease and PAP phosphatase NrnA Authors: Schmier, B.J, Malhotra, A, Nelersa, C.M. Deposit date: 2016-03-29 Release date: 2017-08-02 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural Basis for the Bidirectional Activity of Bacillus nanoRNase NrnA. Sci Rep, 7, 2017
8PDP	10-mer ring of HMPV N-RNA bound to the C-terminal region of P Descriptor: Nucleoprotein, Phosphoprotein, RNA Authors: Whitehead, J.D, Decool, H, Leyrat, C, Carrique, L, Fix, J, Eleouet, J.F, Galloux, M, Renner, M. Deposit date: 2023-06-12 Release date: 2023-12-06 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structure of the N-RNA/P interface indicates mode of L/P recruitment to the nucleocapsid of human metapneumovirus. Nat Commun, 14, 2023
8PDQ	11-mer ring of HMPV N-RNA bound to the C-terminal region of P Descriptor: Nucleoprotein, Phosphoprotein, RNA Authors: Whitehead, J.D, Decool, H, Leyrat, C, Carrique, L, Fix, J, Eleouet, J.F, Galloux, M, Renner, M. Deposit date: 2023-06-12 Release date: 2023-12-06 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structure of the N-RNA/P interface indicates mode of L/P recruitment to the nucleocapsid of human metapneumovirus. Nat Commun, 14, 2023
5IZO	Bacillus NanoRNase A (H103A) + 2 divalent cations + PO4 at the active site Descriptor: Bifunctional oligoribonuclease and PAP phosphatase NrnA, MANGANESE (II) ION, PHOSPHATE ION Authors: Schmier, B.J, Malhotra, A, Nelersa, C.M. Deposit date: 2016-03-25 Release date: 2017-08-02 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural Basis for the Bidirectional Activity of Bacillus nanoRNase NrnA. Sci Rep, 7, 2017
5IUF	Bacillus NanoRNase A active site mutant bound to pAp Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, Bifunctional oligoribonuclease and PAP phosphatase NrnA Authors: Schmier, B.J, Nelersa, C.M, Malhotra, A. Deposit date: 2016-03-17 Release date: 2017-08-02 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural Basis for the Bidirectional Activity of Bacillus nanoRNase NrnA. Sci Rep, 7, 2017
6G19	CryoEM structure of the MDA5-dsRNA filament with 74-degree helical twist Descriptor: Interferon-induced helicase C domain-containing protein 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RNA (5'-R(P*CP*AP*AP*GP*CP*CP*GP*AP*GP*GP*AP*GP*AP*G)-3'), ... Authors: Yu, Q, Qu, K, Modis, Y. Deposit date: 2018-03-20 Release date: 2018-11-21 Last modified: 2020-11-18 Method: ELECTRON MICROSCOPY (3.68 Å) Cite: Cryo-EM Structures of MDA5-dsRNA Filaments at Different Stages of ATP Hydrolysis. Mol. Cell, 72, 2018
4DCM	Crystal Structure of methyltransferase RlmG modifying G1835 of 23S rRNA in Escherichia coli Descriptor: DI(HYDROXYETHYL)ETHER, Ribosomal RNA large subunit methyltransferase G, S-ADENOSYLMETHIONINE Authors: Zhang, H, Gao, Z.Q, Dong, Y.H. Deposit date: 2012-01-17 Release date: 2012-08-01 Last modified: 2017-11-15 Method: X-RAY DIFFRACTION (2.297 Å) Cite: Structural insights into the function of 23S rRNA methyltransferase RlmG (m2G1835) from Escherichia coli. Rna, 18, 2012
1FMN	SOLUTION STRUCTURE OF FMN-RNA APTAMER COMPLEX, NMR, 5 STRUCTURES Descriptor: FLAVIN MONONUCLEOTIDE, RNA (5'-R(*GP*GP*CP*GP*UP*GP*UP*AP*GP*GP *AP*UP*AP*UP*GP*CP*UP*UP*CP*GP*GP*CP*AP*GP*AP*AP*GP *GP*AP*CP*AP*CP*GP*CP*C)-3') Authors: Fan, P, Suri, A.K, Fiala, R, Live, D, Patel, D.J. Deposit date: 1995-12-04 Release date: 1996-07-11 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Molecular recognition in the FMN-RNA aptamer complex. J.Mol.Biol., 258, 1996
8PDR	Rigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of P Descriptor: Nucleoprotein, Phosphoprotein, RNA Authors: Whitehead, J.D, Decool, H, Leyrat, C, Carrique, L, Fix, J, Eleouet, J.F, Galloux, M, Renner, M. Deposit date: 2023-06-12 Release date: 2023-12-06 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (4 Å) Cite: Structure of the N-RNA/P interface indicates mode of L/P recruitment to the nucleocapsid of human metapneumovirus. Nat Commun, 14, 2023
8PDS	Local refinement of dimeric HMPV N-RNA bound to the C-terminal region of P Descriptor: Nucleoprotein, Phosphoprotein, RNA Authors: Whitehead, J.D, Decool, H, Leyrat, C, Carrique, L, Fix, J, Eleouet, J.F, Galloux, M, Renner, M. Deposit date: 2023-06-12 Release date: 2023-12-06 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structure of the N-RNA/P interface indicates mode of L/P recruitment to the nucleocapsid of human metapneumovirus. Nat Commun, 14, 2023
6G1X	CryoEM structure of the MDA5-dsRNA filament with 91-degree helical twist Descriptor: Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*GP*A)-3'), RNA (5'-R(P*UP*CP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*AP*CP*G)-3'), ... Authors: Yu, Q, Qu, K, Modis, Y. Deposit date: 2018-03-22 Release date: 2018-11-21 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.93 Å) Cite: Cryo-EM Structures of MDA5-dsRNA Filaments at Different Stages of ATP Hydrolysis. Mol. Cell, 72, 2018
6G1S	CryoEM structure of the MDA5-dsRNA filament with 87-degree helical twist Descriptor: Interferon-induced helicase C domain-containing protein 1, RNA (5'-R(P*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*GP*A)-3'), RNA (5'-R(P*UP*CP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*AP*CP*G)-3'), ... Authors: Yu, Q, Qu, K, Modis, Y. Deposit date: 2018-03-21 Release date: 2018-11-21 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.93 Å) Cite: Cryo-EM Structures of MDA5-dsRNA Filaments at Different Stages of ATP Hydrolysis. Mol. Cell, 72, 2018
1D2R	2.9 A CRYSTAL STRUCTURE OF LIGAND-FREE TRYPTOPHANYL-TRNA SYNTHETASE: DOMAIN MOVEMENTS FRAGMENT THE ADENINE NUCLEOTIDE BINDING SITE. Descriptor: PROTEIN (TRYPTOPHANYL TRNA SYNTHETASE) Authors: Ilyin, V.A, Carter Jr, C.W. Deposit date: 1999-09-27 Release date: 2000-04-05 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.9 Å) Cite: 2.9 A crystal structure of ligand-free tryptophanyl-tRNA synthetase: domain movements fragment the adenine nucleotide binding site. Protein Sci., 9, 2000
2L3J	The solution structure of the ADAR2 dsRBM-RNA complex reveals a sequence-specific read out of the minor groove Descriptor: Double-stranded RNA-specific editase 1, RNA (71-MER) Authors: Stefl, R, Oberstrass, F.C, Allain, F.H.-T. Deposit date: 2010-09-14 Release date: 2010-10-27 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove. Cell(Cambridge,Mass.), 143, 2010
2JAN	TYROSYL-TRNA SYNTHETASE FROM MYCOBACTERIUM TUBERCULOSIS IN UNLIGANDED STATE Descriptor: TYROSYL-TRNA SYNTHETASE Authors: Hartmann, M.D, Shkolnaya, L.A, Bourenkov, G.P, Strizhov, N.I, Bartunik, H.D. Deposit date: 2006-11-29 Release date: 2008-02-05 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.9 Å) Cite: The Structure of Tyrosyl-tRNA Synthetase from Mycobacterium Tuberculosis To be Published

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