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5OVW
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BU of 5ovw by Molmil
Nanobody-bound BtuF, the vitamin B12 binding protein in Escherichia coli
Descriptor: GLYCEROL, Nanobody, Vitamin B12-binding protein
Authors:Mireku, S.A, Sauer, M.M, Glockshuber, R, Locher, K.P.
Deposit date:2017-08-30
Release date:2017-11-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.653 Å)
Cite:Structural basis of nanobody-mediated blocking of BtuF, the cognate substrate-binding protein of the Escherichia coli vitamin B12 transporter BtuCD.
Sci Rep, 7, 2017
5SUT
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BU of 5sut by Molmil
X-ray crystallographic structure of a covalent trimer derived from A-beta 17_36. Synchrotron data set. (ORN)CVFFCED(ORN)AII(SAR)L(ORN)V.
Descriptor: 16mer A-beta peptide: ORN-CYS-VAL-PHE-PHE-CYS-GLU-ASP-ORN-ALA-ILE-ILE-SAR-LEU-ORN-VAL, CHLORIDE ION
Authors:Kreutzer, A.G, Spencer, R.K, Nowick, J.S.
Deposit date:2016-08-03
Release date:2017-01-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Stabilization, Assembly, and Toxicity of Trimers Derived from A beta.
J.Am.Chem.Soc., 139, 2017
5SUS
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BU of 5sus by Molmil
X-ray crystallographic structure of a covalent trimer derived from A-beta 17_36. X-ray diffractometer data set. (ORN)CVF(MEA)CED(ORN)AIIGL(ORN)V.
Descriptor: 16mer A-beta peptide: ORN-CYS-VAL-PHE-MEA-CYS-GLU-ASP-ORN-ALA-ILE-ILE-GLY-LEU-ORN-VAL, CHLORIDE ION, SODIUM ION
Authors:Kreutzer, A.G, Yoo, S, Nowick, J.S.
Deposit date:2016-08-03
Release date:2017-01-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.349 Å)
Cite:Stabilization, Assembly, and Toxicity of Trimers Derived from A beta.
J.Am.Chem.Soc., 139, 2017
5SUU
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BU of 5suu by Molmil
X-ray crystallographic structure of a covalent trimer derived from A-beta 17-36. X-ray diffractometer data set. (ORN)CVFFCED(ORN)AII(SAR)L(ORN)V.
Descriptor: 16mer A-beta peptide: ORN-CYS-VAL-PHE-PHE-CYS-GLU-ASP-ORN-ALA-ILE-ILE-SAR-LEU-ORN-VAL, CHLORIDE ION, IODIDE ION
Authors:Kreutzer, A.G, Spencer, R.K, Nowick, J.S.
Deposit date:2016-08-03
Release date:2017-01-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.032 Å)
Cite:Stabilization, Assembly, and Toxicity of Trimers Derived from A beta.
J.Am.Chem.Soc., 139, 2017
5SUR
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BU of 5sur by Molmil
X-ray crystallographic structure of a covalent trimer derived from A-beta 17_36. Synchrotron data set. (ORN)CVF(MEA)CED(ORN)AIIGL(ORN)V.
Descriptor: 16mer A-beta peptide: ORN-CYS-VAL-PHE-MEA-CYS-GLU-ASP-ORN-ALA-ILE-ILE-GLY-LEU-ORN-VAL, CHLORIDE ION, HEXANE-1,6-DIOL, ...
Authors:Kreutzer, A.G, Yoo, S, Nowick, J.S.
Deposit date:2016-08-03
Release date:2017-01-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Stabilization, Assembly, and Toxicity of Trimers Derived from A beta.
J.Am.Chem.Soc., 139, 2017
7Q1Z
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BU of 7q1z by Molmil
Structure of formaldehyde cross-linked SARS-CoV-2 S glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Sulbaran, G, Effantin, G, Schoehn, G, Weissenhorn, W.
Deposit date:2021-10-22
Release date:2022-03-09
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Immunization with synthetic SARS-CoV-2 S glycoprotein virus-like particles protects macaques from infection.
Cell Rep Med, 3, 2022
7PGF
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BU of 7pgf by Molmil
Calcium-selective Sp1 channel pore domain only
Descriptor: Ion transporter
Authors:Lolicato, M, Arrigoni, C.
Deposit date:2021-08-13
Release date:2022-06-08
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Quaternary structure independent folding of voltage-gated ion channel pore domain subunits.
Nat.Struct.Mol.Biol., 29, 2022
7PGG
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BU of 7pgg by Molmil
NaVAb1p detergent (DM)
Descriptor: 2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}ethyl heptadecanoate, Ion transport protein
Authors:Lolicato, M, Arrigoni, C.
Deposit date:2021-08-13
Release date:2022-06-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Quaternary structure independent folding of voltage-gated ion channel pore domain subunits.
Nat.Struct.Mol.Biol., 29, 2022
2NCT
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BU of 2nct by Molmil
NMR assignment and structure of a peptide derived from the membrane proximal external region of HIV-1 gp41 in the presence of hexafluoroisopropanol
Descriptor: Envelope glycoprotein gp41
Authors:Jimenez, M, Nieva, J.L, Rujas, E, Partida-Hanon, A, Bruix, M.
Deposit date:2016-04-14
Release date:2017-02-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for broad neutralization of HIV-1 through the molecular recognition of 10E8 helical epitope at the membrane interface.
Sci Rep, 6, 2016
8PWH
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BU of 8pwh by Molmil
Atomic structure and conformational variability of the HER2-Trastuzumab-Pertuzumab complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pertuzumab Fab heavy chain, Pertuzumab Fab light chain, ...
Authors:Ruedas, R, Vuillemot, R, Tubiana, T, Winter, J.M, Pieri, L, Arteni, A.A, Samson, C, Jonic, J, Mathieu, M, Bressanelli, S.
Deposit date:2023-07-20
Release date:2024-02-21
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Structure and conformational variability of the HER2-trastuzumab-pertuzumab complex.
J.Struct.Biol., 216, 2024
2NCS
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BU of 2ncs by Molmil
NMR assignment and structure of a peptide derived from the membrane proximal external region of HIV-1 gp41 in the presence of dodecylphosphocholine micelles
Descriptor: Envelope glycoprotein gp41
Authors:Jimenez, M, Nieva, J.L, Rujas, E, Partida-Hanon, A, Bruix, M.
Deposit date:2016-04-14
Release date:2017-02-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for broad neutralization of HIV-1 through the molecular recognition of 10E8 helical epitope at the membrane interface.
Sci Rep, 6, 2016
5U5M
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BU of 5u5m by Molmil
CRYSTAL STRUCTURE OF I83E MEDITOPE-ENABLED TRASTUZUMAB WITH AZIDO-MEDITOPE
Descriptor: AZIDO-PEG4-MEDITOPE, Immunoglobulin G binding protein A, MEMAB TRASTUZUMAB, ...
Authors:Williams, J.C, Bzymek, K.P, Pucket, J, Avery, K.A, Ma, Y, Xie, J, Zer, C, Horne, D.
Deposit date:2016-12-06
Release date:2018-03-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal Structure Of I83E Meditope-Enabled Trastuzumab With Azido-Meditope
To Be Published
8C6D
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BU of 8c6d by Molmil
Production of antigenically stable enterovirus A71 virus-like particles in Pichia pastoris as a vaccine candidate.
Descriptor: (2S,3R,4E)-2-aminooctadec-4-ene-1,3-diol, Genome polyprotein, Genome polyprotein (Fragment)
Authors:Kingston, N.J, Snowden, J.S, Stonehouse, N.J, Rowlands, D.J, Hogle, J.M.
Deposit date:2023-01-11
Release date:2023-02-22
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Production of antigenically stable enterovirus A71 virus-like particles in Pichia pastoris as a vaccine candidate.
Biorxiv, 2023
7SSC
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BU of 7ssc by Molmil
TRL345 lineage ancestor I8 Fab bound to an HCMV gB-derived peptide
Descriptor: Envelope glycoprotein B peptide, GLYCEROL, TRL345-I8 Fab heavy chain, ...
Authors:Sponholtz, M.R, McLellan, J.S.
Deposit date:2021-11-10
Release date:2022-10-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A single, improbable B cell receptor mutation confers potent neutralization against cytomegalovirus.
Plos Pathog., 19, 2023
5U6A
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BU of 5u6a by Molmil
CRYSTAL STRUCTURE OF I83E MEDITOPE-ENABLED TRASTUZUMAB WITH AZIDO-PEG3-MEDITOPE
Descriptor: Heavy Chain, Immunoglobulin G binding protein A, Light Chain, ...
Authors:Williams, J.C, Bzymek, K.P, Pucket, J, Avery, K.A, Ma, Y, Xie, J, Zer, C, Horne, D.
Deposit date:2016-12-07
Release date:2018-03-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.736 Å)
Cite:Crystal Structure Of I83E Meditope-Enabled Trastuzumab With Azido-PEG3-Meditope
To Be Published
3RRT
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BU of 3rrt by Molmil
Structure of the RSV F protein in the post-fusion conformation
Descriptor: Fusion glycoprotein F0
Authors:McLellan, J.S, Yongping, Y, Graham, B.S, Kwong, P.D.
Deposit date:2011-04-30
Release date:2011-06-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of respiratory syncytial virus fusion glycoprotein in the postfusion conformation reveals preservation of neutralizing epitopes.
J.Virol., 85, 2011
3RRR
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BU of 3rrr by Molmil
Structure of the RSV F protein in the post-fusion conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0
Authors:McLellan, J.S, Yongping, Y, Graham, B.S, Kwong, P.D.
Deposit date:2011-04-30
Release date:2011-06-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.821 Å)
Cite:Structure of respiratory syncytial virus fusion glycoprotein in the postfusion conformation reveals preservation of neutralizing epitopes.
J.Virol., 85, 2011
5VYH
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BU of 5vyh by Molmil
Crystal Structure of MERS-CoV S1 N-terminal Domain
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, FOLIC ACID, ...
Authors:Wang, N, Wrapp, D, Pallesen, J, Ward, A.B, McLellan, J.S.
Deposit date:2017-05-25
Release date:2017-08-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Immunogenicity and structures of a rationally designed prefusion MERS-CoV spike antigen.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4MA7
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BU of 4ma7 by Molmil
Crystal structure of mouse prion protein complexed with Promazine
Descriptor: Major prion protein, POM1 heavy chain, POM1 light chain, ...
Authors:Baral, P.K, Swayampakula, M, James, M.N.G.
Deposit date:2013-08-15
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural basis of prion inhibition by phenothiazine compounds.
Structure, 22, 2014
4MA8
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BU of 4ma8 by Molmil
Crystal structure of mouse prion protein complexed with Chlorpromazine
Descriptor: 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine, Major prion protein, POM1 heavy chain, ...
Authors:Baral, P.K, Swayampakula, M, James, M.N.G.
Deposit date:2013-08-15
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of prion inhibition by phenothiazine compounds.
Structure, 22, 2014
4M61
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BU of 4m61 by Molmil
Crystal structure of unliganded anti-DNA Fab A52
Descriptor: Fab A52 heavy chain, Fab A52 light chain, SULFATE ION
Authors:Stanfield, R.L, Eilat, D, Wilson, I.A.
Deposit date:2013-08-08
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure determination of anti-DNA Fab A52.
Proteins, 82, 2014
8BPG
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BU of 8bpg by Molmil
FcMR binding at subunit Fcu3 of IgM pentamer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fas apoptotic inhibitory molecule 3, ...
Authors:Chen, Q, Rosenthal, P, Tolar, P.
Deposit date:2022-11-16
Release date:2023-04-12
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for Fc receptor recognition of immunoglobulin M.
Nat.Struct.Mol.Biol., 30, 2023
8BPF
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BU of 8bpf by Molmil
FcMR binding at subunit Fcu1 of IgM pentamer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fas apoptotic inhibitory molecule 3, ...
Authors:Chen, Q, Rosenthal, P, Tolar, P.
Deposit date:2022-11-16
Release date:2023-04-12
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis for Fc receptor recognition of immunoglobulin M.
Nat.Struct.Mol.Biol., 30, 2023
8BPE
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BU of 8bpe by Molmil
8:1 binding of FcMR on IgM pentameric core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fas apoptotic inhibitory molecule 3, ...
Authors:Chen, Q, Rosenthal, P, Tolar, P.
Deposit date:2022-11-16
Release date:2023-04-12
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:Structural basis for Fc receptor recognition of immunoglobulin M.
Nat.Struct.Mol.Biol., 30, 2023
5N2F
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BU of 5n2f by Molmil
Structure of PD-L1/small-molecule inhibitor complex
Descriptor: 4-[[4-[[3-(2,3-dihydro-1,4-benzodioxin-6-yl)-2-methyl-phenyl]methoxy]-2,5-bis(fluoranyl)phenyl]methylamino]-3-oxidanylidene-butanoic acid, Programmed cell death 1 ligand 1
Authors:Guzik, K, Zak, K.M, Grudnik, P, Dubin, G, Holak, T.A.
Deposit date:2017-02-07
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Small-Molecule Inhibitors of the Programmed Cell Death-1/Programmed Death-Ligand 1 (PD-1/PD-L1) Interaction via Transiently Induced Protein States and Dimerization of PD-L1.
J. Med. Chem., 60, 2017

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PDB entries from 2024-10-09

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