Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3RGF
DownloadVisualize
BU of 3rgf by Molmil
Crystal Structure of human CDK8/CycC
Descriptor: 1,2-ETHANEDIOL, 4-{4-[({[4-CHLORO-3-(TRIFLUOROMETHYL)PHENYL]AMINO}CARBONYL)AMINO]PHENOXY}-N-METHYLPYRIDINE-2-CARBOXAMIDE, Cyclin-C, ...
Authors:Schneider, E.V, Boettcher, J, Blaesse, M, Huber, R, Maskos, K.
Deposit date:2011-04-08
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Structure of CDK8/CycC Implicates Specificity in the CDK/Cyclin Family and Reveals Interaction with a Deep Pocket Binder.
J.Mol.Biol., 412, 2011
8A8Y
DownloadVisualize
BU of 8a8y by Molmil
Structure of truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Klebsiella pneumoniae
Descriptor: 1-deoxy-D-xylulose-5-phosphate synthase
Authors:Adam, S, Hirsch, A.
Deposit date:2022-06-24
Release date:2023-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.10000443 Å)
Cite:Structure of truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Klebsiella pneumoniae
To Be Published
8A9C
DownloadVisualize
BU of 8a9c by Molmil
Structure of truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Klebsiella pneumoniae in complex with cofactor TPP
Descriptor: 1-deoxy-D-xylulose-5-phosphate synthase, MAGNESIUM ION, THIAMINE DIPHOSPHATE
Authors:Adam, S, Hirsch, A.
Deposit date:2022-06-28
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Klebsiella pneumoniae in complex with cofactor TPP
To Be Published
6EMF
DownloadVisualize
BU of 6emf by Molmil
Crystal structure of Rrp1 from Chaetomium thermophilum in space group C2
Descriptor: 1,2-ETHANEDIOL, G0S4M2, PROLINE
Authors:Ahmed, Y.L, Sinning, I.
Deposit date:2017-10-02
Release date:2017-12-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
6EN7
DownloadVisualize
BU of 6en7 by Molmil
Crystal structure of the ribosome assembly factor Nsa1
Descriptor: Ribosome biogenesis protein NSA1
Authors:Altegoer, F, Bange, G.
Deposit date:2017-10-04
Release date:2017-12-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
6EMG
DownloadVisualize
BU of 6emg by Molmil
Crystal structure of Rrp1 from Chaetomium thermophilum in space group P6322
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, G0S4M2, ...
Authors:Ahmed, Y.L, Sinning, I.
Deposit date:2017-10-02
Release date:2017-12-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
7MN6
DownloadVisualize
BU of 7mn6 by Molmil
Structure of the HER2 S310F/HER3/NRG1b Heterodimer Extracellular Domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Isoform 6 of Pro-neuregulin-1, ...
Authors:Diwanji, D, Trenker, R, Verba, K.A, Jura, N.
Deposit date:2021-04-30
Release date:2021-10-27
Last modified:2021-12-22
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structures of the HER2-HER3-NRG1 beta complex reveal a dynamic dimer interface.
Nature, 600, 2021
5MUB
DownloadVisualize
BU of 5mub by Molmil
ACC1 Fab fragment in complex with citrullinated C1 epitope of CII (CG05)
Descriptor: ACC1 Fab fragment heavy chain, ACC1 Fab fragment light chain, triple-helical peptide containing the citrullinated C1 epitope of collagen type II,Collagen alpha-1(II) chain,triple-helical peptide containing the citrullinated C1 epitope of collagen type II
Authors:Dobritzsch, D, Holmdahl, R, Ge, C.
Deposit date:2017-01-13
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage.
JCI Insight, 2, 2017
5MU2
DownloadVisualize
BU of 5mu2 by Molmil
ACC1 Fab fragment in complex with CII583-591 (CG10)
Descriptor: ACC1 Fab fragment heavy chain, ACC1 Fab fragment light chain, synthetic peptide containing the CII583-591 epitope of collagen type II
Authors:Dobritzsch, D, Holmdahl, R, Ge, C.
Deposit date:2017-01-12
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage.
JCI Insight, 2, 2017
5MU0
DownloadVisualize
BU of 5mu0 by Molmil
ACC1 Fab fragment in complex with citrullinated C1 epitope of CII (IA03)
Descriptor: IA03 peptide containing the citrullinated C1 epitope of collagen type II,Collagen alpha-1(II) chain,IA03 peptide containing the citrullinated C1 epitope of collagen type II, heavy chain of ACC1 antibody Fab fragment, light chain of ACC1 antibody Fab fragment
Authors:Dobritzsch, D, Holmdahl, R, Ge, C.
Deposit date:2017-01-11
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage.
JCI Insight, 2, 2017
5MV3
DownloadVisualize
BU of 5mv3 by Molmil
ACC1 Fab fragment in complex with CII583-591 (CG10)
Descriptor: heavy chain of ACC1 Fab fragment, light chain of ACC1 Fab fragment, synthetic peptide containing the CII583-591 epitope of collagen type II,Collagen alpha-1(II) chain,synthetic peptide containing the CII583-591 epitope of collagen type II,
Authors:Dobritzsch, D, Holmdahl, R, Ge, C.
Deposit date:2017-01-15
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage.
JCI Insight, 2, 2017
5NVN
DownloadVisualize
BU of 5nvn by Molmil
Crystal structure of the human 4EHP-4E-BP1 complex
Descriptor: Eukaryotic translation initiation factor 4E type 2, Eukaryotic translation initiation factor 4E-binding protein 1, FORMIC ACID
Authors:Peter, D, Sandmeir, F, Valkov, E.
Deposit date:2017-05-04
Release date:2017-07-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:GIGYF1/2 proteins use auxiliary sequences to selectively bind to 4EHP and repress target mRNA expression.
Genes Dev., 31, 2017
5MV4
DownloadVisualize
BU of 5mv4 by Molmil
ACC1 Fab fragment in complex with citrullinated CII616-639 epitope of collagen type II (ptm23)
Descriptor: ACC1 antibody Fab fragment, heavy chain, light chain, ...
Authors:Dobritzsch, D, Holmdahl, R, Ge, C.
Deposit date:2017-01-15
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage.
JCI Insight, 2, 2017
6G4G
DownloadVisualize
BU of 6g4g by Molmil
Full length ectodomain of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3) including the SMB domains but with a partially disordered active site structure
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Dohler, C, Zebisch, M, Strater, N.
Deposit date:2018-03-27
Release date:2018-11-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystallization of ectonucleotide phosphodiesterase/pyrophosphatase-3 and orientation of the SMB domains in the full-length ectodomain.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6GEF
DownloadVisualize
BU of 6gef by Molmil
X-ray structure of the Yersinia pseudotuberculosis ATPase DotB
Descriptor: Type IV secretion system protein DotB
Authors:Prevost, M.S, Waksman, G.
Deposit date:2018-04-26
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:X-ray crystal structures of the type IVb secretion system DotB ATPases.
Protein Sci., 27, 2018
6GEB
DownloadVisualize
BU of 6geb by Molmil
X-ray structure of the Legionella pneumophila ATPase DotB
Descriptor: DotB, PHOSPHATE ION
Authors:Prevost, M.S, Waksman, G.
Deposit date:2018-04-26
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:X-ray crystal structures of the type IVb secretion system DotB ATPases.
Protein Sci., 27, 2018
6T41
DownloadVisualize
BU of 6t41 by Molmil
CDK8/Cyclin C in complex with N-(4-chlorobenzyl)isoquinolin-4-amine
Descriptor: 1,2-ETHANEDIOL, Cyclin-C, Cyclin-dependent kinase 8, ...
Authors:Schneider, E.V, Maskos, K, Huber, R, Kuhn, C.-D.
Deposit date:2019-10-11
Release date:2020-01-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:A precisely positioned MED12 activation helix stimulates CDK8 kinase activity.
Proc.Natl.Acad.Sci.USA, 117, 2020
6TPA
DownloadVisualize
BU of 6tpa by Molmil
CDK8/CyclinC in complex with drug ETP-50775
Descriptor: (2~{R})-butane-1,2-diol, 1-[4-chloranyl-3-(trifluoromethyl)phenyl]-3-(5-oxidanylidene-6-pyridin-4-yl-pyrido[2,3-b][1,5]benzoxazepin-9-yl)urea, Cyclin-C, ...
Authors:Munoz, I.G, Pastor, J, Martinez, S.
Deposit date:2019-12-12
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Pyrido[2,3-b][1,5]benzoxazepin-5(6H)-one derivatives as CDK8 inhibitors.
Eur.J.Med.Chem., 201, 2020
1G6O
DownloadVisualize
BU of 1g6o by Molmil
CRYSTAL STRUCTURE OF THE HELICOBACTER PYLORI ATPASE, HP0525, IN COMPLEX WITH ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CAG-ALPHA, DI(HYDROXYETHYL)ETHER
Authors:Yeo, H.J, Savvides, S.N, Herr, A.B, Lanka, E, Waksman, G, Midwest Center for Structural Genomics (MCSG)
Deposit date:2000-11-07
Release date:2001-01-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the hexameric traffic ATPase of the Helicobacter pylori type IV secretion system.
Mol.Cell, 6, 2000
1FV1
DownloadVisualize
BU of 1fv1 by Molmil
STRUCTURAL BASIS FOR THE BINDING OF AN IMMUNODOMINANT PEPTIDE FROM MYELIN BASIC PROTEIN IN DIFFERENT REGISTERS BY TWO HLA-DR2 ALLELES
Descriptor: GLYCEROL, MAJOR HISTOCOMPATIBILITY COMPLEX ALPHA CHAIN, MAJOR HISTOCOMPATIBILITY COMPLEX BETA CHAIN, ...
Authors:Li, H, Mariuzza, A.R, Li, Y, Martin, R.
Deposit date:2000-09-18
Release date:2000-09-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the binding of an immunodominant peptide from myelin basic protein in different registers by two HLA-DR2 proteins.
J.Mol.Biol., 304, 2000
2MZQ
DownloadVisualize
BU of 2mzq by Molmil
NMR structure of the RRM3 domain of Gbp2
Descriptor: Single-strand telomeric DNA-binding protein GBP2
Authors:Martinez-Lumbreras, S, Seraphin, B, Perez-Canadillas, J.
Deposit date:2015-02-23
Release date:2015-12-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Gbp2 interacts with THO/TREX through a novel type of RRM domain.
Nucleic Acids Res., 44, 2016
2N01
DownloadVisualize
BU of 2n01 by Molmil
NMR structure of VirB9 C-terminal domain in complex with VirB7 N-terminal domain from Xanthomonas citri's T4SS
Descriptor: VirB7 protein, VirB9 protein
Authors:Oliveira, L.C, Souza, D.P, Salinas, R.K, Wienk, H, Boelens, R, Farah, S.C.
Deposit date:2015-03-03
Release date:2015-09-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:VirB7 and VirB9 Interactions Are Required for the Assembly and Antibacterial Activity of a Type IV Secretion System.
Structure, 24, 2016
6ONJ
DownloadVisualize
BU of 6onj by Molmil
Crystal structure of PPARgamma ligand binding domain in complex with TRAP220 peptide and agonist rosiglitazone
Descriptor: 2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL), Mediator of RNA polymerase II transcription subunit 1, ...
Authors:Shang, J, Kojetin, D.J.
Deposit date:2019-04-22
Release date:2020-03-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A molecular switch regulating transcriptional repression and activation of PPAR gamma.
Nat Commun, 11, 2020
2DYP
DownloadVisualize
BU of 2dyp by Molmil
Crystal Structure of LILRB2(LIR2/ILT4/CD85d) complexed with HLA-G
Descriptor: 9 Mer Peptide From Histone H2A.x, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Shiroishi, M, Kuroki, K, Rasubala, L, Kohda, D, Maenaka, K.
Deposit date:2006-09-15
Release date:2006-11-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for recognition of the nonclassical MHC molecule HLA-G by the leukocyte Ig-like receptor B2 (LILRB2/LIR2/ILT4/CD85d)
Proc.Natl.Acad.Sci.Usa, 103, 2006
2PUU
DownloadVisualize
BU of 2puu by Molmil
Crystal structure of p38 complex with 1-(5-tert-Butyl-2-p-tolyl-2H-pyrazol-3-yl)-3-[4-(6-morpholin-4-ylmethyl-pyridin-3-yl)naphthalen-1-yl]urea
Descriptor: 5-TERT-BUTYL-2-(4-METHYLPHENYL)-3-{[({4-[6-(MORPHOLIN-4-YLMETHYL)PYRIDIN-3-YL]-1-NAPHTHYL}AMINO)CARBONYL]AMINO}-1H-PYRAZOL-2-IUM, Mitogen-activated protein kinase 14
Authors:Qian, K.C.
Deposit date:2007-05-09
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A new class of p38 MAP kinase inhibitors based on the pyrazole-naphthyl urea scaffold
To be Published

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon