PDB: 214399 resultsInfo pagesStatus searchChemie searchBIRD

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8TFU	Structure of Red beta C-terminal domain in complex with SSB C-terminal peptide, Form 1 Descriptor: Plasmid-derived single-stranded DNA-binding protein, Recombination protein bet Authors: Bell, C.E. Deposit date: 2023-07-11 Release date: 2024-03-13 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (1.482 Å) Cite: Structural Basis for the Interaction of Red beta Single-Strand Annealing Protein with Escherichia coli Single-Stranded DNA-Binding Protein. J.Mol.Biol., 436, 2024
8TGC	Structure of Red beta C-terminal domain in complex with SSB C-terminal peptide, Form 4 Descriptor: Plasmid-derived single-stranded DNA-binding protein, Recombination protein bet Authors: Bell, C.E. Deposit date: 2023-07-12 Release date: 2024-03-13 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (1.484 Å) Cite: Structural Basis for the Interaction of Red beta Single-Strand Annealing Protein with Escherichia coli Single-Stranded DNA-Binding Protein. J.Mol.Biol., 436, 2024
8TG7	Structure of Red beta C-terminal domain in complex with SSB C-terminal peptide, Form 2 Descriptor: Plasmid-derived single-stranded DNA-binding protein, Recombination protein bet Authors: Bell, C.E. Deposit date: 2023-07-12 Release date: 2024-03-13 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (1.775 Å) Cite: Structural Basis for the Interaction of Red beta Single-Strand Annealing Protein with Escherichia coli Single-Stranded DNA-Binding Protein. J.Mol.Biol., 436, 2024
6GVY	Mutant M16A of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus complexed with an template -primer RNA Descriptor: GLYCEROL, Genome polyprotein, RNA (5'-R(P*CP*CP*GP*GP*G)-3'), ... Authors: Verdaguer, N, Ferrer-Orta, C. Deposit date: 2018-06-21 Release date: 2018-08-01 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Contribution of a Multifunctional Polymerase Region of Foot-and-Mouth Disease Virus to Lethal Mutagenesis. J. Virol., 92, 2018
6UUI	Crystal structure of the heterocomplex between coil 2B domains of wild-type keratin 1 (KRT1) and keratin 10 (KRT10) containing mutation Cys401Ala Descriptor: GLYCEROL, Keratin, type I cytoskeletal 10, ... Authors: Lomakin, I.B, Bunick, C.G. Deposit date: 2019-10-30 Release date: 2019-11-13 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.069 Å) Cite: Crystal Structure of Keratin 1/10(C401A) 2B Heterodimer Demonstrates a Proclivity for the C-Terminus of Helix 2B to Form Higher Order Molecular Contacts. Yale J Biol Med, 93, 2020
7RFB	Crystal structure of broadly neutralizing antibody mAb1198 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Flyak, A.I, Bjorkman, P.J. Deposit date: 2021-07-14 Release date: 2022-01-12 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Analysis of antibodies from HCV elite neutralizers identifies genetic determinants of broad neutralization. Immunity, 55, 2022
7RFC	Crystal structure of broadly neutralizing antibody mAb1382 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Flyak, A.I, Bjorkman, P.J. Deposit date: 2021-07-14 Release date: 2022-01-12 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.24 Å) Cite: Analysis of antibodies from HCV elite neutralizers identifies genetic determinants of broad neutralization. Immunity, 55, 2022
5L6M	Structure of Caulobacter crescentus VapBC1 (VapB1deltaC:VapC1 form) Descriptor: GLYCEROL, MALONATE ION, Ribonuclease VapC, ... Authors: Bendtsen, K.L, Xu, K, Luckmann, M, Brodersen, D.E. Deposit date: 2016-05-30 Release date: 2016-12-28 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Toxin inhibition in C. crescentus VapBC1 is mediated by a flexible pseudo-palindromic protein motif and modulated by DNA binding. Nucleic Acids Res., 45, 2017
5XED	Heterodimer constructed from M61A PA cyt c551-HT cyt c552 and HT cyt c552-PA cyt c551 chimeric proteins Descriptor: Cytochrome c-551,Cytochrome c-552, Cytochrome c-552,Cytochrome c-551, HEME C Authors: Zhang, M, Nakanishi, T, Yamanaka, M, Nagao, S, Yanagisawa, S, Shomura, Y, Shibata, N, Ogura, T, Higuchi, Y, Hirota, S. Deposit date: 2017-04-04 Release date: 2017-08-09 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Rational Design of Domain-Swapping-Based c-Type Cytochrome Heterodimers by Using Chimeric Proteins. Chembiochem, 18, 2017
8PM0	Influenza A/H7N9 polymerase in replicase-like conformation in pre-initiation state with Pol II pS5 CTD peptide mimic bound in site 1A/2A Descriptor: 51-mer vRNA loop (v51_mut_S), MAGNESIUM ION, Polymerase acidic protein, ... Authors: Arragain, B, Cusack, S. Deposit date: 2023-06-27 Release date: 2024-02-21 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: The host RNA polymerase II C-terminal domain is the anchor for replication of the influenza virus genome. Nat Commun, 15, 2024
5J4Y	The crystal structure of N-(4-(2-(thiazolo[5,4-c]pyridin-2-yl)phenoxy)phenyl)acetamide bound to JCV Helicase Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Large T antigen, N-{4-[2-([1,3]thiazolo[5,4-c]pyridin-2-yl)phenoxy]phenyl}acetamide, ... Authors: Ter Haar, E. Deposit date: 2016-04-01 Release date: 2016-07-20 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.59 Å) Cite: Fragment-Based Discovery of Dual JC Virus and BK Virus Helicase Inhibitors. J.Med.Chem., 59, 2016
5FAU	wild-type choline TMA lyase in complex with choline Descriptor: CHOLINE ION, Choline trimethylamine-lyase, GLYCEROL Authors: Funk, M.A, Drennan, C.L. Deposit date: 2015-12-12 Release date: 2016-09-28 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase. Cell Chem Biol, 23, 2016
6VNA	Pden_1323 Descriptor: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein Authors: Isiorho, E.A, Mansoorabadi, S.O. Deposit date: 2020-01-29 Release date: 2021-02-03 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.2 Å) Cite: A noncanonical heme oxygenase specific for the degradation of c-type heme. J.Biol.Chem., 296, 2021
6Y2X	RING-DTC domains of Deltex 2, Form 2 Descriptor: Probable E3 ubiquitin-protein ligase DTX2, ZINC ION Authors: Gabrielsen, M, Buetow, L, Huang, D.T. Deposit date: 2020-02-17 Release date: 2020-09-02 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.77 Å) Cite: DELTEX2 C-terminal domain recognizes and recruits ADP-ribosylated proteins for ubiquitination. Sci Adv, 6, 2020
1C75	0.97 A "AB INITIO" CRYSTAL STRUCTURE OF CYTOCHROME C-553 FROM BACILLUS PASTEURII Descriptor: CYTOCHROME C-553, HEME C Authors: Benini, S, Ciurli, S, Rypniewski, W.R, Wilson, K.S. Deposit date: 2000-02-09 Release date: 2000-03-22 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (0.97 Å) Cite: Crystal structure of oxidized Bacillus pasteurii cytochrome c553 at 0.97-A resolution. Biochemistry, 39, 2000
6E94	Crystal Structure of ZBTB38 C-terminal Zinc Fingers 6-9 K1055R in complex with methylated DNA Descriptor: DNA (5'-D(*GP*CP*AP*CP*TP*CP*AP*TP*(DCM)P*GP*GP*(DCM)P*GP*CP*AP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*TP*GP*(DCM)P*GP*CP*(DCM)P*GP*AP*TP*GP*AP*GP*TP*GP*C)-3'), ZINC ION, ... Authors: Hudson, N.O, Whitby, F.G, Buck-Koehntop, B.A. Deposit date: 2018-07-31 Release date: 2018-11-07 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.594 Å) Cite: Structural insights into methylated DNA recognition by the C-terminal zinc fingers of the DNA reader protein ZBTB38. J. Biol. Chem., 293, 2018
7WEM	Solid-state NMR Structure of TFo c-Subunit Ring Descriptor: ATP synthase subunit c Authors: Akutsu, H, Todokoro, Y, Kang, S.-J, Suzuki, T, Yoshida, M, Ikegami, T, Fujiwara, T. Deposit date: 2021-12-23 Release date: 2022-08-10 Last modified: 2024-05-15 Method: SOLID-STATE NMR Cite: Chemical Conformation of the Essential Glutamate Site of the c -Ring within Thermophilic Bacillus F o F 1 -ATP Synthase Determined by Solid-State NMR Based on its Isolated c -Ring Structure. J.Am.Chem.Soc., 144, 2022
8R3K	Influenza A/H7N9 polymerase in self-stalled pre-termination state, with Pol II pS5 CTD peptide mimic bound in site 1A/2A. Descriptor: 51-mer vRNA loop (v51_mut_S), MAGNESIUM ION, PYROPHOSPHATE 2-, ... Authors: Arragain, B, Cusack, S. Deposit date: 2023-11-09 Release date: 2024-02-21 Method: ELECTRON MICROSCOPY (3.43 Å) Cite: The host RNA polymerase II C-terminal domain is the anchor for replication of the influenza virus genome. Nat Commun, 15, 2024
7STE	Rad24-RFC ADP state Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Checkpoint protein RAD24, ... Authors: Castaneda, J.C, Schrecker, M, Remus, D, Hite, R.K. Deposit date: 2021-11-12 Release date: 2022-04-06 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (2.73 Å) Cite: Mechanisms of loading and release of the 9-1-1 checkpoint clamp. Nat.Struct.Mol.Biol., 29, 2022
7MKI	Cryo-EM structure of Escherichia coli RNA polymerase bound to lambda PR (-5G to C) promoter DNA Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Saecker, R.M, Darst, S.A, Chen, J. Deposit date: 2021-04-23 Release date: 2021-09-29 Last modified: 2024-05-29 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structural origins of Escherichia coli RNA polymerase open promoter complex stability. Proc.Natl.Acad.Sci.USA, 118, 2021
8PNQ	Influenza A/H7N9 polymerase in elongation state with continuous Pol II pS5 CTD peptide mimic bound in site 1A/2A Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, 51-mer vRNA loop (v51_mut_S), MAGNESIUM ION, ... Authors: Arragain, B, Cusack, S. Deposit date: 2023-06-30 Release date: 2024-02-21 Method: ELECTRON MICROSCOPY (2.88 Å) Cite: The host RNA polymerase II C-terminal domain is the anchor for replication of the influenza virus genome. Nat Commun, 15, 2024
8PNP	Influenza A/H7N9 polymerase in pre-initiation state with continuous Pol II pS5 CTD peptide mimic bound in site 1A/2A Descriptor: 51-mer vRNA loop (v51_mut_S), Polymerase acidic protein, Polymerase basic protein 2, ... Authors: Arragain, B, Cusack, S. Deposit date: 2023-06-30 Release date: 2024-02-21 Method: ELECTRON MICROSCOPY (2.49 Å) Cite: The host RNA polymerase II C-terminal domain is the anchor for replication of the influenza virus genome. Nat Commun, 15, 2024
7NCL	Glutathione-S-transferase GliG mutant E82Q Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Glutathione S-transferase GliG Authors: Groll, M, Huber, E.M. Deposit date: 2021-01-29 Release date: 2021-05-12 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin. Angew.Chem.Int.Ed.Engl., 60, 2021
7NC8	Glutathione-S-transferase GliG mutant S24A Descriptor: 1,2-ETHANEDIOL, Glutathione S-transferase GliG Authors: Groll, M, Huber, E.M. Deposit date: 2021-01-28 Release date: 2021-05-12 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin. Angew.Chem.Int.Ed.Engl., 60, 2021
7NC5	Glutathione-S-transferase GliG in complex with reduced glutathione Descriptor: 1,2-ETHANEDIOL, GLUTATHIONE, Glutathione S-transferase GliG Authors: Groll, M, Huber, E.M. Deposit date: 2021-01-28 Release date: 2021-05-12 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin. Angew.Chem.Int.Ed.Engl., 60, 2021

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