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PDB: 100 results

5WIW
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BU of 5wiw by Molmil
Crystal structure of murine 4-1BB N128A mutant from HEK293T cells in P43 space group
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, SULFATE ION, ...
Authors:Zajonc, D.M, Bitra, A.
Deposit date:2017-07-20
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of murine 4-1BB and its interaction with 4-1BBL support a role for galectin-9 in 4-1BB signaling.
J. Biol. Chem., 293, 2018
5TLK
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BU of 5tlk by Molmil
COMPLEX BETWEEN HUMAN CD27 AND FAB FRAGMENTS OF ANTIBODIES M2177 AND H2191
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CD27 antigen, H2191 HEAVY CHAIN, ...
Authors:Teplyakov, A, Obmolova, G, Malia, T, Gilliland, G.L.
Deposit date:2016-10-11
Release date:2017-02-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Epitope-dependent mechanisms of CD27 neutralization revealed by X-ray crystallography.
Mol. Immunol., 83, 2017
5WJF
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BU of 5wjf by Molmil
Crystal structure of murine 4-1BB from HEK293T cells in P21212 space group
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Tumor necrosis factor receptor superfamily member 9
Authors:Zajonc, D.M, Doukov, T, Bitra, A.
Deposit date:2017-07-21
Release date:2017-12-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of murine 4-1BB and its interaction with 4-1BBL support a role for galectin-9 in 4-1BB signaling.
J. Biol. Chem., 293, 2018
3THM
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BU of 3thm by Molmil
Crystal structure of Fas receptor extracellular domain in complex with Fab EP6b_B01
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Fab EP6b_B01, ...
Authors:Zuger, S, Stirnimann, C, Briand, C, Grutter, M.G.
Deposit date:2011-08-19
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A series of Fas receptor agonist antibodies that demonstrate an inverse correlation between affinity and potency.
Cell Death Differ., 19, 2012
3QO4
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BU of 3qo4 by Molmil
The Crystal Structure of Death Receptor 6
Descriptor: ACETATE ION, SULFATE ION, Tumor necrosis factor receptor superfamily member 21
Authors:Kuester, M, Kemmerzehl, S, Dahms, S.O, Roeser, D, Than, M.E.
Deposit date:2011-02-09
Release date:2011-05-18
Last modified:2012-02-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of death receptor 6 (DR6): a potential receptor of the amyloid precursor protein (APP).
J.Mol.Biol., 409, 2011
3U3Q
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BU of 3u3q by Molmil
The S-SAD phased crystal structure of the ecto-domain of Death Receptor 6 (DR6)
Descriptor: Tumor necrosis factor receptor superfamily member 21
Authors:Ru, H, Zhao, L.X, Ding, W, Jiao, L.Y, Shaw, N, Zhang, L.G, Hung, L.W, Matsugaki, N, Wakatsuki, S, Liu, Z.J.
Deposit date:2011-10-06
Release date:2012-05-02
Last modified:2013-07-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:S-SAD phasing study of death receptor 6 and its solution conformation revealed by SAXS.
Acta Crystallogr.,Sect.D, 68, 2012
3U3T
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BU of 3u3t by Molmil
The S-SAD phased crystal structure of the ecto-domain of Death Receptor 6 (DR6)
Descriptor: Tumor necrosis factor receptor superfamily member 21
Authors:Ru, H, Zhao, L.X, Ding, W, Jiao, L.Y, Shaw, N, Zhang, L.G, Hung, L.W, Matsugaki, N, Wakatsuki, S, Liu, Z.J.
Deposit date:2011-10-06
Release date:2012-05-02
Last modified:2012-07-11
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:S-SAD phasing study of death receptor 6 and its solution conformation revealed by SAXS
Acta Crystallogr.,Sect.D, 68, 2012
8HLB
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BU of 8hlb by Molmil
Cryo-EM structure of biparatopic antibody Bp109-92 in complex with TNFR2
Descriptor: TR109 heavy chain, TR109 light chain, TR92 heavy chain, ...
Authors:Akiba, H, Fujita, J, Ise, T, Nishiyama, K, Miyata, T, Kato, T, Namba, K, Ohno, H, Kamada, H, Nagata, S, Tsumoto, K.
Deposit date:2022-11-29
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:Development of a 1:1-binding biparatopic anti-TNFR2 antagonist by reducing signaling activity through epitope selection.
Commun Biol, 6, 2023
4RSU
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BU of 4rsu by Molmil
Crystal structure of the light and hvem complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
Authors:Liu, W, Ramagoal, U.A, Himmel, D, Bonanno, J.B, Nathenson, S.G, Almo, S.C, Atoms-to-Animals: The Immune Function Network (IFN), New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-11-11
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:HVEM structures and mutants reveal distinct functions of binding to LIGHT and BTLA/CD160.
J.Exp.Med., 218, 2021
5L36
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BU of 5l36 by Molmil
Crystal Structure of a human FasL mutant in complex with human DcR3
Descriptor: SODIUM ION, Tumor necrosis factor ligand superfamily member 6, Tumor necrosis factor receptor superfamily member 6B
Authors:Liu, W, Bonanno, J.B, Almo, S.C.
Deposit date:2016-08-03
Release date:2016-09-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of the Complex of Human FasL and Its Decoy Receptor DcR3.
Structure, 24, 2016
1JMA
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BU of 1jma by Molmil
CRYSTAL STRUCTURE OF THE HERPES SIMPLEX VIRUS GLYCOPROTEIN D BOUND TO THE CELLULAR RECEPTOR HVEA/HVEM
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCOPROTEIN D, HERPESVIRUS ENTRY MEDIATOR, ...
Authors:Carfi, A, Willis, S.H, Whitbeck, J.C, Krummenacker, C, Cohen, G.H, Eisenberg, R.J, Wiley, D.C.
Deposit date:2001-07-17
Release date:2001-09-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Herpes simplex virus glycoprotein D bound to the human receptor HveA.
Mol.Cell, 8, 2001
4E4D
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BU of 4e4d by Molmil
Crystal structure of mouse RANKL-OPG complex
Descriptor: CHLORIDE ION, Tumor necrosis factor ligand superfamily member 11, soluble form, ...
Authors:Nelson, C.A, Fremont, D.H.
Deposit date:2012-03-12
Release date:2012-10-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:RANKL Employs Distinct Binding Modes to Engage RANK and the Osteoprotegerin Decoy Receptor.
Structure, 20, 2012
2AW2
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BU of 2aw2 by Molmil
Crystal structure of the human BTLA-HVEM complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, B and T lymphocyte attenuator, NICKEL (II) ION, ...
Authors:Compaan, D.M, Gonzalez, L.C, Tom, I, Loyet, K.M, Eaton, D, Hymowitz, S.G.
Deposit date:2005-08-31
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Attenuating Lymphocyte Activity: the crystal structure of the BTLA-HVEM complex
J.Biol.Chem., 280, 2005
4N90
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BU of 4n90 by Molmil
Crystal structure of ternary complex of TRAIL, DR5, and Fab fragment from a DR5 agonist antibody
Descriptor: Fab heavy chain, Fab light chain, Tumor necrosis factor ligand superfamily member 10, ...
Authors:Huang, X.
Deposit date:2013-10-18
Release date:2014-09-03
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Apo2L/TRAIL and the Death Receptor 5 Agonist Antibody AMG 655 Cooperate to Promote Receptor Clustering and Antitumor Activity.
Cancer Cell, 26, 2014
4YN0
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BU of 4yn0 by Molmil
Crystal structure of APP E2 domain in complex with DR6 CRD domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Amyloid beta A4 protein, MAGNESIUM ION, ...
Authors:Xu, K, Nikolov, D.
Deposit date:2015-03-08
Release date:2015-04-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of DR6 in complex with the amyloid precursor protein provides insight into death receptor activation.
Genes Dev., 29, 2015
4MXW
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BU of 4mxw by Molmil
Structure of heterotrimeric lymphotoxin LTa1b2 bound to lymphotoxin beta receptor LTbR and anti-LTa Fab
Descriptor: Lymphotoxin-alpha, Lymphotoxin-beta, Tumor necrosis factor receptor superfamily member 3, ...
Authors:Sudhamsu, J, Yin, J.P, Hymowitz, S.G.
Deposit date:2013-09-26
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Dimerization of LT beta R by LT alpha 1 beta 2 is necessary and sufficient for signal transduction.
Proc.Natl.Acad.Sci.USA, 110, 2013
7MSG
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BU of 7msg by Molmil
The crystal structure of LIGHT in complex with HVEM and CD160
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CD160 antigen, soluble form,Tumor necrosis factor receptor superfamily member 14, ...
Authors:Liu, W, Ramagopal, U, Garrett-Thompson, S.C, Fedorov, E, Bonanno, J.B, Almo, S.C.
Deposit date:2021-05-11
Release date:2021-10-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:HVEM structures and mutants reveal distinct functions of binding to LIGHT and BTLA/CD160.
J.Exp.Med., 218, 2021
4GIQ
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BU of 4giq by Molmil
Crystal Structure of mouse RANK bound to RANKL
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, SODIUM ION, ...
Authors:Nelson, C.A, Wang, M.W.-H, Fremont, D.H.
Deposit date:2012-08-08
Release date:2012-10-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:RANKL Employs Distinct Binding Modes to Engage RANK and the Osteoprotegerin Decoy Receptor.
Structure, 20, 2012
1TNR
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BU of 1tnr by Molmil
CRYSTAL STRUCTURE OF THE SOLUBLE HUMAN 55 KD TNF RECEPTOR-HUMAN TNF-BETA COMPLEX: IMPLICATIONS FOR TNF RECEPTOR ACTIVATION
Descriptor: TUMOR NECROSIS FACTOR BETA, TUMOR NECROSIS FACTOR RECEPTOR P55
Authors:Banner, D.W.
Deposit date:1994-05-09
Release date:1994-07-31
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of the soluble human 55 kd TNF receptor-human TNF beta complex: implications for TNF receptor activation.
Cell(Cambridge,Mass.), 73, 1993
3IJ2
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BU of 3ij2 by Molmil
Ligand-receptor structure
Descriptor: Beta-nerve growth factor, Nerve growth factor receptor (TNFR superfamily, member 16)
Authors:Feng, D, Garcia, K.C.
Deposit date:2009-08-03
Release date:2010-01-12
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (3.75 Å)
Cite:Molecular and structural insight into proNGF engagement of p75NTR and sortilin.
J.Mol.Biol., 396, 2010
4I9X
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BU of 4i9x by Molmil
Crystal structure of human cytomegalovirus glycoprotein UL141 targeting the death receptor TRAIL-R2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Nemcovicova, I, Zajonc, D.M.
Deposit date:2012-12-05
Release date:2013-04-03
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of Human Cytomegalovirus UL141 Binding to TRAIL-R2 Reveals Novel, Non-canonical Death Receptor Interactions.
Plos Pathog., 9, 2013
6A3V
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BU of 6a3v by Molmil
Complex structure of human 4-1BB and 4-1BBL
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Tumor necrosis factor ligand superfamily member 9, Tumor necrosis factor receptor superfamily member 9
Authors:Li, Y, Zhang, C, Chai, Y, Qi, J, Tien, P, Gao, S, Gao, G.F.
Deposit date:2018-06-17
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.391 Å)
Cite:Limited Cross-Linking of 4-1BB by 4-1BB Ligand and the Agonist Monoclonal Antibody Utomilumab.
Cell Rep, 25, 2018
3ALQ
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BU of 3alq by Molmil
Crystal structure of TNF-TNFR2 complex
Descriptor: COBALT (II) ION, Tumor necrosis factor, Tumor necrosis factor receptor superfamily member 1B
Authors:Mukai, Y, Nakamura, T, Yamagata, Y, Tsutsumi, Y.
Deposit date:2010-08-06
Release date:2010-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Solution of the Structure of the TNF-TNFR2 Complex
Sci.Signal., 3, 2010
5BNQ
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BU of 5bnq by Molmil
Crystal structure of hRANKL-mRANK complex
Descriptor: CHLORIDE ION, PHOSPHATE ION, SODIUM ION, ...
Authors:Ren, J.
Deposit date:2015-05-26
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A RANKL mutant used as an inter-species vaccine for efficient immunotherapy of osteoporosis.
Sci Rep, 5, 2015
1SG1
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BU of 1sg1 by Molmil
Crystal Structure of the Receptor-Ligand Complex between Nerve Growth Factor and the Common Neurotrophin Receptor p75
Descriptor: Beta-nerve growth factor, CHLORIDE ION, Tumor necrosis factor receptor superfamily member 16
Authors:He, X.L, Garcia, K.C.
Deposit date:2004-02-22
Release date:2004-06-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of nerve growth factor complexed with the shared neurotrophin receptor p75
Science, 304, 2004

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