Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 666 results

4XGU
DownloadVisualize
BU of 4xgu by Molmil
Structure of C. elegans PCH-2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Putative pachytene checkpoint protein 2, SULFATE ION
Authors:Ye, Q, Corbett, K.D.
Deposit date:2015-01-02
Release date:2015-05-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:TRIP13 is a protein-remodeling AAA+ ATPase that catalyzes MAD2 conformation switching.
Elife, 4, 2015
2P65
DownloadVisualize
BU of 2p65 by Molmil
Crystal Structure of the first nucleotide binding domain of chaperone ClpB1, putative, (Pv089580) from Plasmodium Vivax
Descriptor: Hypothetical protein PF08_0063
Authors:Wernimont, A.K, Lew, J, Kozieradzki, I, Lin, Y.H, Hassanali, A, Zhao, Y, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Artz, J.D, Structural Genomics Consortium (SGC)
Deposit date:2007-03-16
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the first nucleotide binding domain of chaperone ClpB1, putative, (Pv089580) from Plasmodium Vivax
To be Published
4YPN
DownloadVisualize
BU of 4ypn by Molmil
Crystal structure of a LonA fragment containing the 3-helix bundle and the AAA-alpha/beta domain
Descriptor: Lon protease
Authors:Chang, C.-I, Lin, C.-C.
Deposit date:2015-03-13
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural Insights into the Allosteric Operation of the Lon AAA+ Protease
Structure, 24, 2016
1NSF
DownloadVisualize
BU of 1nsf by Molmil
D2 HEXAMERIZATION DOMAIN OF N-ETHYLMALEIMIDE SENSITIVE FACTOR (NSF)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, N-ETHYLMALEIMIDE SENSITIVE FACTOR
Authors:Yu, R.C, Hanson, P.I, Jahn, R, Brunger, A.T.
Deposit date:1998-06-26
Release date:1998-11-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the ATP-dependent oligomerization domain of N-ethylmaleimide sensitive factor complexed with ATP.
Nat.Struct.Biol., 5, 1998
6LK0
DownloadVisualize
BU of 6lk0 by Molmil
Crystal structure of human wild type TRIP13
Descriptor: Pachytene checkpoint protein 2 homolog
Authors:Wang, Y, Huang, J, Li, B, Xue, H, Tricot, G, Hu, L, Xu, Z, Sun, X, Chang, S, Gao, L, Tao, Y, Xu, H, Xie, Y, Xiao, W, Yu, D, Kong, Y, Chen, G, Sun, X, Lian, F, Zhang, N, Wu, X, Mao, Z, Zhan, F, Zhu, W, Shi, J.
Deposit date:2019-12-17
Release date:2020-01-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Small-Molecule Inhibitor Targeting TRIP13 Suppresses Multiple Myeloma Progression.
Cancer Res., 80, 2020
1D2N
DownloadVisualize
BU of 1d2n by Molmil
D2 DOMAIN OF N-ETHYLMALEIMIDE-SENSITIVE FUSION PROTEIN
Descriptor: GLYCEROL, MAGNESIUM ION, N-ETHYLMALEIMIDE-SENSITIVE FUSION PROTEIN, ...
Authors:Lenzen, C.U, Steinmann, D, Whiteheart, S.W, Weis, W.I.
Deposit date:1998-06-30
Release date:1998-10-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the hexamerization domain of N-ethylmaleimide-sensitive fusion protein.
Cell(Cambridge,Mass.), 94, 1998
2CHG
DownloadVisualize
BU of 2chg by Molmil
Replication Factor C domains 1 and 2
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, REPLICATION FACTOR C SMALL SUBUNIT
Authors:Seybert, A, Singleton, M.R, Cook, N, Hall, D.R, Wigley, D.B.
Deposit date:2006-03-14
Release date:2006-06-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Communication between Subunits within an Archaeal Clamp-Loader Complex.
Embo J., 25, 2006
1JBK
DownloadVisualize
BU of 1jbk by Molmil
Crystal Structure of the First Nucelotide Binding Domain of ClpB
Descriptor: CLPB PROTEIN, MAGNESIUM ION
Authors:Jingzhi, L, Bingdong, S.
Deposit date:2001-06-05
Release date:2002-06-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of E. coli Hsp100 ClpB nucleotide-binding domain 1 (NBD1) and mechanistic studies on ClpB ATPase activity.
J.Mol.Biol., 318, 2002
6U1Y
DownloadVisualize
BU of 6u1y by Molmil
bcs1 AAA domain
Descriptor: MAGNESIUM ION, Mitochondrial chaperone BCS1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Tang, W.K, Xia, D.
Deposit date:2019-08-17
Release date:2020-02-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structures of AAA protein translocase Bcs1 suggest translocation mechanism of a folded protein.
Nat.Struct.Mol.Biol., 27, 2020
6PB3
DownloadVisualize
BU of 6pb3 by Molmil
Structure of Rhizobiales Trip13
Descriptor: Rhizobiales Sp. Pch2, SULFATE ION
Authors:Ye, Q, Corbett, K.D.
Deposit date:2019-06-12
Release date:2019-12-25
Last modified:2020-03-04
Method:X-RAY DIFFRACTION (2.048 Å)
Cite:HORMA Domain Proteins and a Trip13-like ATPase Regulate Bacterial cGAS-like Enzymes to Mediate Bacteriophage Immunity.
Mol.Cell, 77, 2020
6N2I
DownloadVisualize
BU of 6n2i by Molmil
Lon protease AAA+ domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA-binding ATP-dependent protease La
Authors:Botos, I, Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2018-11-13
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:New insights into structural and functional relationships between LonA proteases and ClpB chaperones.
Febs Open Bio, 9, 2019
7W46
DownloadVisualize
BU of 7w46 by Molmil
Crystal structure of Bacillus subtilis YjoB with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Uncharacterized ATPase YjoB
Authors:Dahal, P, Kwon, E, Kim, D.Y.
Deposit date:2021-11-26
Release date:2022-10-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure and biochemical analysis suggest that YjoB ATPase is a putative substrate-specific molecular chaperone.
Proc.Natl.Acad.Sci.USA, 119, 2022
7W42
DownloadVisualize
BU of 7w42 by Molmil
Crystal structure of Bacillus subtilis YjoB
Descriptor: Uncharacterized ATPase YjoB
Authors:Dahal, P, Kwon, E, Kim, D.Y.
Deposit date:2021-11-26
Release date:2022-10-19
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.619 Å)
Cite:Crystal structure and biochemical analysis suggest that YjoB ATPase is a putative substrate-specific molecular chaperone.
Proc.Natl.Acad.Sci.USA, 119, 2022
5VQ9
DownloadVisualize
BU of 5vq9 by Molmil
Structure of human TRIP13, Apo form
Descriptor: Pachytene checkpoint protein 2 homolog
Authors:Ye, Q, Corbett, K.D.
Deposit date:2017-05-08
Release date:2017-06-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:The AAA+ ATPase TRIP13 remodels HORMA domains through N-terminal engagement and unfolding.
EMBO J., 36, 2017
5VQA
DownloadVisualize
BU of 5vqa by Molmil
Structure of human TRIP13, ATP-bound form
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Pachytene checkpoint protein 2 homolog
Authors:Ye, Q, Corbett, K.D.
Deposit date:2017-05-08
Release date:2017-06-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:The AAA+ ATPase TRIP13 remodels HORMA domains through N-terminal engagement and unfolding.
EMBO J., 36, 2017
5WC2
DownloadVisualize
BU of 5wc2 by Molmil
Crystal Structure of ADP-bound human TRIP13
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Pachytene checkpoint protein 2 homolog
Authors:Jeong, B.-C, Luo, X.
Deposit date:2017-06-29
Release date:2018-04-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanistic insight into TRIP13-catalyzed Mad2 structural transition and spindle checkpoint silencing.
Nat Commun, 8, 2017
4W5W
DownloadVisualize
BU of 4w5w by Molmil
Rubisco activase from Arabidopsis thaliana
Descriptor: Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic, SULFATE ION
Authors:Hasse, D, Larsson, A.M, Andersson, I.
Deposit date:2014-08-19
Release date:2015-04-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of Arabidopsis thaliana Rubisco activase
Acta Crystallogr.,Sect.D, 71, 2015
5JI3
DownloadVisualize
BU of 5ji3 by Molmil
HslUV complex
Descriptor: 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, ATP-dependent protease ATPase subunit HslU, ATP-dependent protease subunit HslV
Authors:Grant, R.A, Sauer, R.T, Schmitz, K.R, Baytshtok, V.
Deposit date:2016-04-21
Release date:2016-12-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Structurally Dynamic Region of the HslU Intermediate Domain Controls Protein Degradation and ATP Hydrolysis.
Structure, 24, 2016
7OAT
DownloadVisualize
BU of 7oat by Molmil
Structural basis for targeted p97 remodelling by ASPL as prerequisite for p97 trimethylation by METTL21D
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Petrovic, S, Heinemann, U, Roske, Y.
Deposit date:2021-04-20
Release date:2022-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.995 Å)
Cite:Structural remodeling of AAA+ ATPase p97 by adaptor protein ASPL facilitates posttranslational methylation by METTL21D.
Proc.Natl.Acad.Sci.USA, 120, 2023
6WQH
DownloadVisualize
BU of 6wqh by Molmil
Molecular basis for the ATPase-powered substrate translocation by the Lon AAA+ protease
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Ig2 substrate, Lon protease, ...
Authors:Zhang, K, Li, S, Hsiehb, K, Sub, S, Pintilie, G, Chiu, W, Chang, C.
Deposit date:2020-04-28
Release date:2021-06-09
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Molecular basis for ATPase-powered substrate translocation by the Lon AAA+ protease.
J.Biol.Chem., 297, 2021
8C0V
DownloadVisualize
BU of 8c0v by Molmil
Structure of the peroxisomal Pex1/Pex6 ATPase complex bound to a substrate in single seam state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Ruettermann, M, Koci, M, Lill, P, Geladas, E.D, Kaschani, F, Klink, B.U, Erdmann, R, Gatsogiannis, C.
Deposit date:2022-12-19
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure of the peroxisomal Pex1/Pex6 ATPase complex bound to a substrate.
Nat Commun, 14, 2023
4WW0
DownloadVisualize
BU of 4ww0 by Molmil
Truncated FtsH from A. aeolicus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent zinc metalloprotease FtsH, ZINC ION
Authors:Vostrukhina, M, Baumann, U, Schacherl, M, Bieniossek, C, Lanz, M, Baumgartner, R.
Deposit date:2014-11-09
Release date:2015-05-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:The structure of Aquifex aeolicus FtsH in the ADP-bound state reveals a C2-symmetric hexamer.
Acta Crystallogr.,Sect.D, 71, 2015
4HSE
DownloadVisualize
BU of 4hse by Molmil
Crystal structure of ClpB NBD1 in complex with guanidinium chloride and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Chaperone protein ClpB, ...
Authors:Zeymer, C, Werbeck, N.D, Schlichting, I, Reinstein, J.
Deposit date:2012-10-30
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The molecular mechanism of hsp100 chaperone inhibition by the prion curing agent guanidinium chloride.
J.Biol.Chem., 288, 2013
3M6A
DownloadVisualize
BU of 3m6a by Molmil
Crystal structure of Bacillus subtilis Lon C-terminal domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent protease La 1
Authors:Duman, R.E, Lowe, J.Y.
Deposit date:2010-03-15
Release date:2010-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal Structures of Bacillus subtilis Lon Protease.
J.Mol.Biol., 401, 2010
5WYK
DownloadVisualize
BU of 5wyk by Molmil
Cryo-EM structure of the 90S small subunit pre-ribosome (Mtr4-depleted, Enp1-TAP)
Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S ribosomal RNA, 40S ribosomal protein S1-A, ...
Authors:Ye, K, Zhu, X, Sun, Q.
Deposit date:2017-01-13
Release date:2017-03-29
Last modified:2017-05-17
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Molecular architecture of the 90S small subunit pre-ribosome.
Elife, 6, 2017

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon