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PDB: 352 results

2O4X
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BU of 2o4x by Molmil
Crystal structure of human P100 tudor domain
Descriptor: Staphylococcal nuclease domain-containing protein 1
Authors:Shaw, N, Zhao, M, Cheng, C, Xu, H, Yang, J, Silvennoinen, O, Rao, Z, Wang, B.C, Liu, Z.J.
Deposit date:2006-12-05
Release date:2007-02-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of human P100 tudor domain
To be Published
7RHS
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BU of 7rhs by Molmil
Cryo-EM structure of apo-state of human CNGA3/CNGB3 channel
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cyclic nucleotide-gated cation channel alpha-3, Cyclic nucleotide-gated cation channel beta-3, ...
Authors:Zheng, X, Yang, J.
Deposit date:2021-07-18
Release date:2022-03-02
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Structure of the human cone photoreceptor cyclic nucleotide-gated channel.
Nat.Struct.Mol.Biol., 29, 2022
7R5S
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BU of 7r5s by Molmil
Structure of the human CCAN bound to alpha satellite DNA
Descriptor: Centromere protein H, Centromere protein I, Centromere protein K, ...
Authors:Yatskevich, S, Muir, K.W, Bellini, D, Zhang, Z, Yang, J, Tischer, T, Predin, M, Dendooven, T, McLaughlin, S.H, Barford, D.
Deposit date:2022-02-11
Release date:2022-04-27
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Structure of the human inner kinetochore bound to a centromeric CENP-A nucleosome.
Science, 376, 2022
2LBM
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BU of 2lbm by Molmil
Solution structure of the ADD domain of ATRX complexed with histone tail H3 1-15 K9me3
Descriptor: Transcriptional regulator ATRX, ZINC ION, histone tail H3 K9me3
Authors:Eustermann, S, Yang, J, Neuhaus, D.
Deposit date:2011-04-08
Release date:2011-06-29
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Combinatorial readout of histone H3 modifications specifies localization of ATRX to heterochromatin
Nat.Struct.Mol.Biol., 2011
7FIR
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BU of 7fir by Molmil
The crystal structure of beta-1,2-mannobiose phosphorylase in complex with 1,4-mannobiose
Descriptor: Beta-1,2-mannobiose phosphorylase, PENTAETHYLENE GLYCOL, TRIETHYLENE GLYCOL, ...
Authors:Dai, L, Chang, Z, Yang, J, Liu, W, Yang, Y, Chen, C.-C, Zhang, L, Huang, J, Sun, Y, Guo, R.-T.
Deposit date:2021-08-01
Release date:2022-01-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural investigation of a thermostable 1,2-beta-mannobiose phosphorylase from Thermoanaerobacter sp. X-514.
Biochem.Biophys.Res.Commun., 579, 2021
7FIQ
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BU of 7fiq by Molmil
The crystal structure of mannose-bound beta-1,2-mannobiose phosphorylase from Thermoanaerobacter sp.
Descriptor: Beta-1,2-mannobiose phosphorylase, GLYCEROL, PENTAETHYLENE GLYCOL, ...
Authors:Dai, L, Chang, Z, Yang, J, Liu, W, Yang, Y, Chen, C.-C, Zhang, L, Huang, J, Sun, Y, Guo, R.-T.
Deposit date:2021-08-01
Release date:2022-01-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural investigation of a thermostable 1,2-beta-mannobiose phosphorylase from Thermoanaerobacter sp. X-514.
Biochem.Biophys.Res.Commun., 579, 2021
7FIP
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BU of 7fip by Molmil
The native structure of beta-1,2-mannobiose phosphorylase from Thermoanaerobacter sp.
Descriptor: Beta-1,2-mannobiose phosphorylase, ZINC ION
Authors:Dai, L, Chang, Z, Yang, J, Liu, W, Yang, Y, Chen, C.-C, Zhang, L, Huang, J, Sun, Y, Guo, R.-T.
Deposit date:2021-08-01
Release date:2022-01-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural investigation of a thermostable 1,2-beta-mannobiose phosphorylase from Thermoanaerobacter sp. X-514.
Biochem.Biophys.Res.Commun., 579, 2021
7FIS
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BU of 7fis by Molmil
The crystal structure of beta-1,2-mannobiose phosphorylase in complex with mannose 1-phosphate (M1P)
Descriptor: 1-O-phosphono-alpha-D-mannopyranose, Beta-1,2-mannobiose phosphorylase, GLYCEROL, ...
Authors:Dai, L, Chang, Z, Yang, J, Liu, W, Yang, Y, Chen, C.-C, Zhang, L, Huang, J, Sun, Y, Guo, R.-T.
Deposit date:2021-08-01
Release date:2022-01-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structural investigation of a thermostable 1,2-beta-mannobiose phosphorylase from Thermoanaerobacter sp. X-514.
Biochem.Biophys.Res.Commun., 579, 2021
7DIY
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BU of 7diy by Molmil
Crystal structure of SARS-CoV-2 nsp10 bound to nsp14-exoribonuclease domain
Descriptor: MAGNESIUM ION, ZINC ION, nsp10 protein, ...
Authors:Lin, S, Chen, H, Chen, Z.M, Yang, F.L, Ye, F, Zheng, Y, Yang, J, Lin, X, Sun, H.L, Wang, L.L, Wen, A, Cao, Y, Lu, G.W.
Deposit date:2020-11-19
Release date:2021-05-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.693 Å)
Cite:Crystal structure of SARS-CoV-2 nsp10 bound to nsp14-ExoN domain reveals an exoribonuclease with both structural and functional integrity.
Nucleic Acids Res., 49, 2021
6JB6
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BU of 6jb6 by Molmil
Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.7 A resolution
Descriptor: Ubiquitin, Ubiquitin-conjugating enzyme E2 K
Authors:Lee, J.-G, Youn, H.-S, Lee, Y, An, J.Y, Park, K.R, Kang, J.Y, Mun, S.A, Park, J, Park, T, Jin, M.W, Yang, J, Eom, S.H.
Deposit date:2019-01-25
Release date:2019-03-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.7 A resolution
To Be Published
6JB7
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BU of 6jb7 by Molmil
Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.1 A resolution
Descriptor: Ubiquitin, Ubiquitin-conjugating enzyme E2 K
Authors:Lee, J.-G, Youn, H.-S, Lee, Y, An, J.Y, Park, K.R, Kang, J.Y, Mun, S.A, Park, J, Park, T, Jin, M.W, Yang, J, Eom, S.H.
Deposit date:2019-01-25
Release date:2019-03-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.1 A resolution
To Be Published
5XIW
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BU of 5xiw by Molmil
Crystal structure of T2R-TTL-Colchicine complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
Authors:Wang, Y, Yang, J, Wang, T, Chen, L.
Deposit date:2017-04-27
Release date:2018-04-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The compound millepachine and its derivatives inhibit tubulin polymerization by irreversibly binding to the colchicine-binding site in beta-tubulin.
J. Biol. Chem., 2018
5XP3
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BU of 5xp3 by Molmil
Crystal structure of apo T2R-TTL
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
Authors:Wang, Y, Yang, J, Wang, T, Chen, L.
Deposit date:2017-05-31
Release date:2017-10-25
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The compound millepachine and its derivatives inhibit tubulin polymerization by irreversibly binding to the colchicine-binding site in beta-tubulin.
J. Biol. Chem., 2018
7DVM
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BU of 7dvm by Molmil
DgkA structure in E.coli lipid bilayer
Descriptor: Diacylglycerol kinase
Authors:Li, J, Yang, J.
Deposit date:2021-01-13
Release date:2022-04-13
Last modified:2023-09-27
Method:SOLID-STATE NMR
Cite:Structure of membrane diacylglycerol kinase in lipid bilayers.
Commun Biol, 4, 2021
7CLT
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BU of 7clt by Molmil
Crystal structure of the EFhd1/Swiprosin-2, a mitochondrial actin-binding protein
Descriptor: CALCIUM ION, EF-hand domain-containing protein D1, GLYCEROL, ...
Authors:Mun, S.A, Park, J, Park, K.R, Lee, Y, Kang, J.Y, Park, T, Jin, M, Yang, J, Jun, C.D, Eom, S.H.
Deposit date:2020-07-22
Release date:2021-01-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.07380986 Å)
Cite:Structural and Biochemical Characterization of EFhd1/Swiprosin-2, an Actin-Binding Protein in Mitochondria.
Front Cell Dev Biol, 8, 2020
7CLV
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BU of 7clv by Molmil
Solution structure of mitochondrial Tim23 channel in complex with a signaling peptide
Descriptor: COX4 isoform 1, TIM23 isoform 1
Authors:Zhou, S, Ruan, M.S, Li, Y.Y, Yang, J, Richter, C, Schwalbe, H, Shen, B, Wang, J.F.
Deposit date:2020-07-22
Release date:2020-12-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the voltage-gated Tim23 channel in complex with a mitochondrial presequence peptide.
Cell Res., 31, 2021
7WAF
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BU of 7waf by Molmil
Trichodesmium erythraeum cyanophycin synthetase 1 (TeCphA1) with ATPgammaS and 4x(beta-Asp-Arg)
Descriptor: 4x(beta-Asp-Arg), ARGININE, Cyanophycin synthase, ...
Authors:Miyakawa, T, Yang, J, Kawasaki, M, Adachi, N, Fujii, A, Miyauchi, Y, Muramatsu, T, Moriya, T, Senda, T, Tanokura, M.
Deposit date:2021-12-14
Release date:2022-09-07
Last modified:2022-09-14
Method:ELECTRON MICROSCOPY (2.52 Å)
Cite:Structural bases for aspartate recognition and polymerization efficiency of cyanobacterial cyanophycin synthetase.
Nat Commun, 13, 2022
7WAC
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BU of 7wac by Molmil
Trichodesmium erythraeum cyanophycin synthetase 1 (TeCphA1)
Descriptor: Cyanophycin synthase
Authors:Kawasaki, M, Miyakawa, T, Yang, J, Adachi, N, Fujii, A, Miyauchi, Y, Muramatsu, T, Moriya, T, Senda, T, Tanokura, M.
Deposit date:2021-12-14
Release date:2022-09-07
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Structural bases for aspartate recognition and polymerization efficiency of cyanobacterial cyanophycin synthetase.
Nat Commun, 13, 2022
7WAD
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BU of 7wad by Molmil
Trichodesmium erythraeum cyanophycin synthetase 1 (TeCphA1) with ATPgammaS
Descriptor: Cyanophycin synthase, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Kawasaki, M, Miyakawa, T, Yang, J, Adachi, N, Fujii, A, Miyauchi, Y, Muramatsu, T, Moriya, T, Senda, T, Tanokura, M.
Deposit date:2021-12-14
Release date:2022-09-07
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structural bases for aspartate recognition and polymerization efficiency of cyanobacterial cyanophycin synthetase.
Nat Commun, 13, 2022
7WAE
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BU of 7wae by Molmil
Trichodesmium erythraeum cyanophycin synthetase 1 (TeCphA1) with ATPgammaS, 4x(beta-Asp-Arg), and aspartate
Descriptor: 4x(beta-Asp-Arg), ARGININE, ASPARTIC ACID, ...
Authors:Miyakawa, T, Yang, J, Kawasaki, M, Adachi, N, Fujii, A, Miyauchi, Y, Muramatsu, T, Moriya, T, Senda, T, Tanokura, M.
Deposit date:2021-12-14
Release date:2022-09-07
Last modified:2022-09-14
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Structural bases for aspartate recognition and polymerization efficiency of cyanobacterial cyanophycin synthetase.
Nat Commun, 13, 2022
7WKC
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BU of 7wkc by Molmil
A prototype protein nanocage minimized from carboxysomes with gated oxygen permeability
Descriptor: Carboxysome shell vertex protein CcmL
Authors:Tan, H, Yang, J.
Deposit date:2022-01-08
Release date:2022-02-16
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:A prototype protein nanocage minimized from carboxysomes with gated oxygen permeability.
Proc.Natl.Acad.Sci.USA, 119, 2022
7C3Y
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BU of 7c3y by Molmil
Crystal structure of the N-terminal domain of human MdmX protein in complex with Nutlin3a
Descriptor: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, 4-({(4S,5R)-4,5-bis(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one, Protein Mdm4
Authors:Su, Z.D, Cheng, X.Y, Zhang, B.L, Kuang, Z.K, Yang, J, Li, Z.C, Yu, J.P, Zhao, Z.T, Cao, C.Z.
Deposit date:2020-05-14
Release date:2020-06-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.632 Å)
Cite:Crystal structure of the N-terminal domain of human MdmX protein in complex with Nutlin3a
To Be Published
7C44
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BU of 7c44 by Molmil
Crystal structure of the p53-binding domain of human MdmX protein in complex with Nutlin3a
Descriptor: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, 4-({(4S,5R)-4,5-bis(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one, Protein Mdm4
Authors:Cheng, X.Y, Zhang, B.L, Kuang, Z.K, Yang, J, Li, Z.C, Yu, J.P, Zhao, Z.T, Cao, C.Z, Su, Z.D.
Deposit date:2020-05-15
Release date:2020-06-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the p53-binding domain of human MdmX protein in complex with Nutlin3a
To Be Published
7C3Q
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BU of 7c3q by Molmil
Human MdmX protein in complex with Nutlin3a
Descriptor: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, 4-({(4S,5R)-4,5-bis(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one, DI(HYDROXYETHYL)ETHER, ...
Authors:Su, Z.D, Cheng, X.Y, Zhang, B.L, Kuang, Z.K, Yang, J, Li, Z.C, Yu, J.P, Zhao, Z.T, Cao, C.Z.
Deposit date:2020-05-13
Release date:2020-06-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Human MdmX protein in complex with Nutlin3a
To Be Published
1BRM
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BU of 1brm by Molmil
ASPARTATE BETA-SEMIALDEHYDE DEHYDROGENASE FROM ESCHERICHIA COLI
Descriptor: ASPARTATE-SEMIALDEHYDE DEHYDROGENASE
Authors:Hadfield, A.T, Kryger, G, Ouyang, J, Ringe, D, Petsko, G.A, Viola, R.E.
Deposit date:1998-08-24
Release date:1999-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of aspartate-beta-semialdehyde dehydrogenase from Escherichia coli, a key enzyme in the aspartate family of amino acid biosynthesis.
J.Mol.Biol., 289, 1999

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