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PDB: 482 results
2JQR
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BU of 2jqr by Molmil
Solution model of crosslinked complex of cytochrome c and adrenodoxin
Descriptor: Adrenodoxin, mitochondrial, Cytochrome c iso-1, ...
Authors:Xu, X, Reinle, W, Hannemann, F, Konarev, P.V, Svergun, D.I, Bernhardt, R, Ubbink, M.
Deposit date:2007-06-07
Release date:2008-04-22
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Dynamics in a pure encounter complex of two proteins studied by solution scattering and paramagnetic NMR spectroscopy
J.Am.Chem.Soc., 130, 2008
3OTF
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BU of 3otf by Molmil
Structural basis for the cAMP-dependent gating in human HCN4 channel
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
Authors:Xu, X, Vysotskaya, Z.V, Liu, Q, Zhou, L.
Deposit date:2010-09-11
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the cAMP-dependent gating in the human HCN4 channel.
J.Biol.Chem., 285, 2010
5UX6
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BU of 5ux6 by Molmil
Structure of Human POFUT1 in its apo form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GDP-fucose protein O-fucosyltransferase 1, GLYCEROL
Authors:Xu, X, McMillan, B, Blacklow, S.C.
Deposit date:2017-02-22
Release date:2017-04-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structure of human POFUT1, its requirement in ligand-independent oncogenic Notch signaling, and functional effects of Dowling-Degos mutations.
Glycobiology, 27, 2017
5DAN
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BU of 5dan by Molmil
Crystal structure of a novel aldo keto reductase Tm1743 from Thermotoga maritima in complex with NADP+
Descriptor: 2,5-diketo-D-gluconic acid reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Xu, X.
Deposit date:2015-08-20
Release date:2016-09-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a novel aldo keto reductase Tm1743 from Thermotoga maritima in complex with NADP+
To Be Published
5UXH
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BU of 5uxh by Molmil
Structure of Human POFUT1 in complex with GDP-fucose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GDP-fucose protein O-fucosyltransferase 1, GUANOSINE-5'-DIPHOSPHATE-BETA-L-FUCOPYRANOSE
Authors:Xu, X, McMillan, B, Blacklow, S.C.
Deposit date:2017-02-22
Release date:2017-04-05
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structure of human POFUT1, its requirement in ligand-independent oncogenic Notch signaling, and functional effects of Dowling-Degos mutations.
Glycobiology, 27, 2017
6IVA
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BU of 6iva by Molmil
Crystal structure of the S. typhimurium oxaloacetate decarboxylase beta-gamma sub-complex
Descriptor: Oxaloacetate decarboxylase beta chain, Probable oxaloacetate decarboxylase gamma chain
Authors:Xu, X, Xiang, S.
Deposit date:2018-12-03
Release date:2020-06-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (4.403 Å)
Cite:Structural insights into sodium transport by the oxaloacetate decarboxylase sodium pump.
Elife, 9, 2020
5W55
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BU of 5w55 by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor JWG048
Descriptor: 1,2-ETHANEDIOL, 11-ethyl-2-({2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidine-1-carbonyl]phenyl}amino)-5-methyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one, Bromodomain-containing protein 4
Authors:Xu, X, Blacklow, S.C.
Deposit date:2017-06-14
Release date:2018-06-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.354 Å)
Cite:Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor JWG048
To Be Published
2MIQ
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BU of 2miq by Molmil
Solution NMR Structure of PHD Type 1 Zinc Finger Domain 1 of Lysine-specific Demethylase Lid from Drosophila melanogaster, Northeast Structural Genomics Consortium (NESG) Target FR824J
Descriptor: Lysine-specific demethylase lid, ZINC ION
Authors:Xu, X, Eletsky, A, Shastry, R, Maglaqui, M, Janjua, H, Xiao, R, Everett, J.K, Sukumaran, D.K, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG), Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)
Deposit date:2013-12-17
Release date:2014-01-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution NMR Structure of PHD Type 1 Zinc Finger Domain 1 from Lysine-specific Demethylase Lid from Drosophila melanogaster, Northeast Structural Genomics Consortium (NESG) Target FR824J
To be Published
2M0C
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BU of 2m0c by Molmil
Solution NMR Structure of Homeobox Domain of Human ALX4, Northeast Structural Genomics Consortium (NESG) Target HR4490C
Descriptor: Homeobox protein aristaless-like 4
Authors:Xu, X, Eletsky, A, Pulavarti, S, Lee, D, Janjua, H, Xiao, R, Acton, T.B, Everett, J.K, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-10-24
Release date:2012-11-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Structure of Homeobox Domain of Human ALX4, Northeast Structural Genomics Consortium (NESG) Target HR4490C
To be Published
2M9X
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BU of 2m9x by Molmil
Solution NMR Structure of Microtubule-associated serine/threonine-protein kinase 1 from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR9151A
Descriptor: Microtubule-associated serine/threonine-protein kinase 1
Authors:Xu, X, Eletsky, A, Shastry, R, Lee, D, Hamilton, K, Xiao, R, Acton, T.B, Everett, J.K, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-06-20
Release date:2013-07-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Structure of Microtubule-associated serine/threonine-protein kinase 1 from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR9151A
To be Published
2LY9
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BU of 2ly9 by Molmil
Solution NMR Structure of Homeobox 2 Domain from Human ZHX1 repressor, Northeast Structural Genomics Consortium (NESG) Target HR7907F
Descriptor: Zinc fingers and homeoboxes protein 1
Authors:Xu, X, Eletsky, A, Mills, J.L, Pulavarti, S.V.S.R.K, Lee, D, Kohan, E, Janjua, H, Xiao, R, Acton, T.B, Everett, J.K, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-09-14
Release date:2012-11-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Structure of Homeobox 2 Domain from Human ZHX1 repressor, Northeast Structural Genomics Consortium (NESG) Target HR7907F
To be Published
2N8I
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BU of 2n8i by Molmil
Solution NMR Structure of Designed Protein DA05, Northeast Structural Genomics Consortium (NESG) Target OR626
Descriptor: Designed Protein DA05
Authors:Xu, X, Eletsky, A, Federizon, J.F, Jacobs, T.M, Kuhlman, B, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2015-10-15
Release date:2016-01-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Design of structurally distinct proteins using strategies inspired by evolution.
Science, 352, 2016
7JTQ
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BU of 7jtq by Molmil
Human Complement Factor B Inhibited by a Slow Off-Rate Modified Aptamer of 31 Bases
Descriptor: Complement factor B, DNA (32-MER)
Authors:Xu, X, Geisbrecht, B.V.
Deposit date:2020-08-18
Release date:2020-12-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Inhibition of the Complement Alternative Pathway by Chemically Modified DNA Aptamers That Bind with Picomolar Affinity to Factor B.
J Immunol., 206, 2021
2MR6
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BU of 2mr6 by Molmil
Solution NMR Structure of De novo designed protein, Northeast Structural Genomics Consortium (NESG) Target OR462
Descriptor: De novo designed Protein OR462
Authors:Xu, X, Nivon, L, Federizon, J.F, Maglaqui, M, Janjua, H, Mao, L, Xiao, R, Kornhaber, G, Baker, D, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2014-07-01
Release date:2014-08-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Structure of De novo designed protein, Northeast Structural Genomics Consortium (NESG) Target OR462
To be Published
7JTN
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BU of 7jtn by Molmil
Human Complement Factor B Inhibited by a Slow Off-Rate Modified Aptamer of 29 Bases
Descriptor: Complement factor B, DNA (30-MER)
Authors:Xu, X, Geisbrecht, B.V.
Deposit date:2020-08-18
Release date:2020-12-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Inhibition of the Complement Alternative Pathway by Chemically Modified DNA Aptamers That Bind with Picomolar Affinity to Factor B.
J Immunol., 206, 2021
5I6V
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BU of 5i6v by Molmil
Structure of F285S, a Cancer-Associated Mutation of the Oncogenic Phosphatase SHP2
Descriptor: GLYCEROL, Tyrosine-protein phosphatase non-receptor type 11
Authors:Xu, X, Blacklow, S.C.
Deposit date:2016-02-16
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural and Functional Consequences of Three Cancer-Associated Mutations of the Oncogenic Phosphatase SHP2.
Biochemistry, 55, 2016
2MIO
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BU of 2mio by Molmil
Solution NMR Structure of SH3 Domain 1 of Rho GTPase-activating Protein 10 from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR9129A
Descriptor: Rho GTPase-activating protein 10
Authors:Xu, X, Eletsky, A, Pulavarti, S.V.S.R.K, Wang, H, Janjua, H, Xiao, R, Everett, J.K, Sukumaran, D.K, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-12-16
Release date:2014-01-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Structure of SH3 Domain 1 of Rho GTPase-activating Protein 10 from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR9129A
To be Published
2M9W
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BU of 2m9w by Molmil
Solution NMR Structure of Transcription Factor GATA-4 from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR4783B
Descriptor: Transcription factor GATA-4, ZINC ION
Authors:Xu, X, Eletsky, A, Lee, D, Kohn, E, Janjua, H, Xiao, R, Acton, T.B, Everett, J.K, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-06-20
Release date:2013-07-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Structure of a Transcription Factor GATA-4 from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR4783B
To be Published
2PV2
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BU of 2pv2 by Molmil
Crystallographic Structure of SurA first peptidyl-prolyl isomerase domain complexed with peptide NFTLKFWDIFRK
Descriptor: C-peptide, Chaperone surA
Authors:Xu, X, McKay, D.B.
Deposit date:2007-05-09
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The Periplasmic Bacterial Molecular Chaperone SurA Adapts its Structure to Bind Peptides in Different Conformations to Assert a Sequence Preference for Aromatic Residues.
J.Mol.Biol., 373, 2007
2KAJ
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BU of 2kaj by Molmil
NMR structure of gallium substituted ferredoxin
Descriptor: Ferredoxin-1, GALLIUM (III) ION
Authors:Xu, X, Ubbink, M, Knaff, D.B.
Deposit date:2008-11-06
Release date:2009-11-10
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structural and functional characterization of the ga-substituted ferredoxin from Synechocystis sp. PCC6803, a mimic of the native protein.
Biochemistry, 49, 2010
2PV1
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BU of 2pv1 by Molmil
Crystallographic Structure of SurA first peptidyl-prolyl isomerase domain complexed with peptide WEYIPNV
Descriptor: Chaperone surA, Glycosyl transferase, group 1
Authors:Xu, X, McKay, D.B.
Deposit date:2007-05-09
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The Periplasmic Bacterial Molecular Chaperone SurA Adapts its Structure to Bind Peptides in Different Conformations to Assert a Sequence Preference for Aromatic Residues.
J.Mol.Biol., 373, 2007
7ELC
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BU of 7elc by Molmil
Structure of monomeric complex of MACV L bound to Z and 3'-vRNA
Descriptor: 3'-vRNA promoter, MANGANESE (II) ION, RING finger protein Z, ...
Authors:Xu, X, Peng, R, Peng, Q, Shi, Y.
Deposit date:2021-04-09
Release date:2021-05-05
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of Lassa and Machupo virus polymerases complexed with cognate regulatory Z proteins identify targets for antivirals.
Nat Microbiol, 6, 2021
7ELA
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BU of 7ela by Molmil
Structure of Lassa virus polymerase in complex with 3'-vRNA and Z mutant (F36A)
Descriptor: 3-'vRNA promoter, MANGANESE (II) ION, RING finger protein Z, ...
Authors:Xu, X, Peng, R, Peng, Q, Shi, Y.
Deposit date:2021-04-09
Release date:2021-05-05
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures of Lassa and Machupo virus polymerases complexed with cognate regulatory Z proteins identify targets for antivirals.
Nat Microbiol, 6, 2021
7CKM
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BU of 7ckm by Molmil
Structure of Machupo virus polymerase bound to Z matrix protein (monomeric complex)
Descriptor: MANGANESE (II) ION, RING finger protein Z, RNA-directed RNA polymerase L, ...
Authors:Xu, X, Peng, R, Peng, Q, Shi, Y.
Deposit date:2020-07-17
Release date:2021-05-05
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Cryo-EM structures of Lassa and Machupo virus polymerases complexed with cognate regulatory Z proteins identify targets for antivirals
Nat Microbiol, 6, 2021
7CKL
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BU of 7ckl by Molmil
Structure of Lassa virus polymerase bound to Z matrix protein
Descriptor: MANGANESE (II) ION, RING finger protein Z, RNA-directed RNA polymerase L, ...
Authors:Xu, X, Peng, R, Peng, Q, Shi, Y.
Deposit date:2020-07-17
Release date:2021-05-05
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Cryo-EM structures of Lassa and Machupo virus polymerases complexed with cognate regulatory Z proteins identify targets for antivirals
Nat Microbiol, 6, 2021

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