Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 54 results

6WMN
DownloadVisualize
BU of 6wmn by Molmil
Human poly-N-acetyl-lactosamine synthase structure demonstrates a modular assembly of catalytic subsites for GT-A glycosyltransferases
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Kadirvelraj, R, Wood, Z.A.
Deposit date:2020-04-21
Release date:2020-12-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Comparison of human poly-N-acetyl-lactosamine synthase structure with GT-A fold glycosyltransferases supports a modular assembly of catalytic subsites.
J.Biol.Chem., 296, 2020
6WMO
DownloadVisualize
BU of 6wmo by Molmil
Human poly-N-acetyl-lactosamine synthase structure demonstrates a modular assembly of catalytic subsites for GT-A glycosyltransferases
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Kadirvelraj, R, Wood, Z.A.
Deposit date:2020-04-21
Release date:2020-12-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Comparison of human poly-N-acetyl-lactosamine synthase structure with GT-A fold glycosyltransferases supports a modular assembly of catalytic subsites.
J.Biol.Chem., 296, 2020
6X5H
DownloadVisualize
BU of 6x5h by Molmil
Human Alpha-1,6-fucosyltransferase (FUT8) bound to GDP
Descriptor: 1,2-ETHANEDIOL, Alpha-(1,6)-fucosyltransferase, GLYCEROL, ...
Authors:Kadirvelraj, R, Wood, Z.A.
Deposit date:2020-05-26
Release date:2020-10-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Characterizing human alpha-1,6-fucosyltransferase (FUT8) substrate specificity and structural similarities with related fucosyltransferases.
J.Biol.Chem., 295, 2020
6WMM
DownloadVisualize
BU of 6wmm by Molmil
Human poly-N-acetyl-lactosamine synthase structure demonstrates a modular assembly of catalytic subsites for GT-A glycosyltransferases
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Kadirvelraj, R, Wood, Z.A.
Deposit date:2020-04-21
Release date:2020-12-02
Last modified:2021-04-28
Method:X-RAY DIFFRACTION (1.548 Å)
Cite:Comparison of human poly-N-acetyl-lactosamine synthase structure with GT-A fold glycosyltransferases supports a modular assembly of catalytic subsites.
J.Biol.Chem., 296, 2020
1YF0
DownloadVisualize
BU of 1yf0 by Molmil
Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin.
Descriptor: Alkyl hydroperoxide reductase subunit C, SULFATE ION
Authors:Parsonage, D, Youngblood, D.S, Sarma, G.N, Wood, Z.A, Karplus, P.A, Poole, L.B.
Deposit date:2004-12-29
Release date:2005-08-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin.
Biochemistry, 44, 2005
6X5S
DownloadVisualize
BU of 6x5s by Molmil
Human Alpha-1,6-fucosyltransferase (FUT8) bound to GDP and A3'-Asn
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, A3'-Asn, Alpha-(1,6)-fucosyltransferase, ...
Authors:Kadirvelraj, R, Wood, Z.A.
Deposit date:2020-05-26
Release date:2020-10-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Characterizing human alpha-1,6-fucosyltransferase (FUT8) substrate specificity and structural similarities with related fucosyltransferases.
J.Biol.Chem., 295, 2020
6X5R
DownloadVisualize
BU of 6x5r by Molmil
Human Alpha-1,6-fucosyltransferase (FUT8) bound to GDP and A2-Asn
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, A2-Asn, ...
Authors:Kadirvelraj, R, Wood, Z.A.
Deposit date:2020-05-26
Release date:2020-10-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Characterizing human alpha-1,6-fucosyltransferase (FUT8) substrate specificity and structural similarities with related fucosyltransferases.
J.Biol.Chem., 295, 2020
1YF1
DownloadVisualize
BU of 1yf1 by Molmil
Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin.
Descriptor: Alkyl hydroperoxide reductase subunit C, SODIUM ION
Authors:Parsonage, D, Youngblood, D.S, Sarma, G.N, Wood, Z.A, Karplus, P.A, Poole, L.B.
Deposit date:2004-12-29
Release date:2005-08-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin.
Biochemistry, 44, 2005
6X5T
DownloadVisualize
BU of 6x5t by Molmil
Human Alpha-1,6-fucosyltransferase (FUT8) bound to GDP and A3-Asn
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-(1,6)-fucosyltransferase, GLYCEROL, ...
Authors:Kadirvelraj, R, Wood, Z.A.
Deposit date:2020-05-26
Release date:2020-10-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Characterizing human alpha-1,6-fucosyltransferase (FUT8) substrate specificity and structural similarities with related fucosyltransferases.
J.Biol.Chem., 295, 2020
1YEP
DownloadVisualize
BU of 1yep by Molmil
Structural and biochemical analysis of the link between enzymatic activity and olgomerization in AhpC, a bacterial peroxiredoxin.
Descriptor: Alkyl hydroperoxide reductase subunit C, SULFATE ION
Authors:Parsonage, D, Youngblood, D.S, Sarma, G.N, Wood, Z.A, Karplus, P.A, Poole, L.B.
Deposit date:2004-12-28
Release date:2005-08-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin.
Biochemistry, 44, 2005
6X5U
DownloadVisualize
BU of 6x5u by Molmil
Human Alpha-1,6-fucosyltransferase (FUT8) bound to GDP and NM5M2-Asn
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kadirvelraj, R, Wood, Z.A.
Deposit date:2020-05-26
Release date:2020-10-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Characterizing human alpha-1,6-fucosyltransferase (FUT8) substrate specificity and structural similarities with related fucosyltransferases.
J.Biol.Chem., 295, 2020
1ZYN
DownloadVisualize
BU of 1zyn by Molmil
Oxidized structure of the N-terminal domain of Salmonella typhimurium AhpF
Descriptor: Alkyl hydroperoxide reductase subunit F
Authors:Roberts, B.R, Wood, Z.A, Jonsson, T.J, Poole, L.B, Karplus, P.A.
Deposit date:2005-06-10
Release date:2005-06-21
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Oxidized and synchrotron cleaved structures of the disulfide redox center in the N-terminal domain of Salmonella typhimurium AhpF
Protein Sci., 14, 2005
1ZYP
DownloadVisualize
BU of 1zyp by Molmil
Synchrotron reduced form of the N-terminal domain of Salmonella typhimurium AhpF
Descriptor: Alkyl hydroperoxide reductase subunit F
Authors:Roberts, B.R, Wood, Z.A, Jonsson, T.J, Poole, L.B, Karplus, P.A.
Deposit date:2005-06-10
Release date:2005-06-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Oxidized and synchrotron cleaved structures of the disulfide redox center in the N-terminal domain of Salmonella typhimurium AhpF
Protein Sci., 14, 2005
1YEX
DownloadVisualize
BU of 1yex by Molmil
Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin.
Descriptor: Alkyl hydroperoxide reductase subunit C, SULFATE ION
Authors:Parsonage, D, Youngblood, D.S, Sarma, G.N, Wood, Z.A, Karplus, P.A, Poole, L.B.
Deposit date:2004-12-28
Release date:2005-08-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin.
Biochemistry, 44, 2005
3TF5
DownloadVisualize
BU of 3tf5 by Molmil
Structure of UDP-glucose dehydrogenase V132 deletion
Descriptor: UDP-glucose 6-dehydrogenase
Authors:Sennett, N.C, Wood, Z.A.
Deposit date:2011-08-15
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Conformational flexibility in the allosteric regulation of human UDP-{alpha}-D-glucose 6-dehydrogenase.
Biochemistry, 50, 2011
3PRJ
DownloadVisualize
BU of 3prj by Molmil
Role of Packing Defects in the Evolution of Allostery and Induced Fit in Human UDP-Glucose Dehydrogenase.
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, UDP-glucose 6-dehydrogenase, URIDINE-5'-DIPHOSPHATE-XYLOPYRANOSE
Authors:Kadirvelraj, R, Wood, Z.A.
Deposit date:2010-11-29
Release date:2011-06-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Role of Packing Defects in the Evolution of Allostery and Induced Fit in Human UDP-Glucose Dehydrogenase.
Biochemistry, 50, 2011
3PTZ
DownloadVisualize
BU of 3ptz by Molmil
Role of Packing Defects in the Evolution of Allostery and Induced Fit in Human UDP-Glucose Dehydrogenase.
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-glucose 6-dehydrogenase, URIDINE-5'-DIPHOSPHATE-XYLOPYRANOSE
Authors:Kadirvelraj, R, Wood, Z.A.
Deposit date:2010-12-03
Release date:2011-06-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Role of Packing Defects in the Evolution of Allostery and Induced Fit in Human UDP-Glucose Dehydrogenase.
Biochemistry, 50, 2011
4LK3
DownloadVisualize
BU of 4lk3 by Molmil
Crystal structure of Human UDP-xylose synthase R236A substitution
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PYROPHOSPHATE 2-, SULFATE ION, ...
Authors:Walsh Jr, R.M, Polizzi, S.J, Wood, Z.A.
Deposit date:2013-07-05
Release date:2013-08-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Man o' war mutation in UDP-alpha-D-xylose synthase favors the abortive catalytic cycle and uncovers a latent potential for hexamer formation.
Biochemistry, 54, 2015
6C5Z
DownloadVisualize
BU of 6c5z by Molmil
Human UDP-Glucose Dehydrogenase A225L substitutuion with UDP-glucose and NADH bound
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, UDP-glucose 6-dehydrogenase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Gross, P.G, Sidlo, A.M, Walsh, R.M, Peeples, W.B, Wood, Z.A.
Deposit date:2018-01-17
Release date:2019-01-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The A225L Substitution of hUGDH alters structure and function
To Be Published
6C4J
DownloadVisualize
BU of 6c4j by Molmil
Ligand bound full length hUGDH with A104L substitution
Descriptor: CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, S-1,2-PROPANEDIOL, ...
Authors:Beattie, N.R, Pioso, B.J, Wood, Z.A, Sidlo, A.M.
Deposit date:2018-01-12
Release date:2018-05-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Hysteresis and Allostery in Human UDP-Glucose Dehydrogenase Require a Flexible Protein Core.
Biochemistry, 57, 2018
4M55
DownloadVisualize
BU of 4m55 by Molmil
Crystal structure of Human UDP-xylose synthase R236H substitution
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PYROPHOSPHATE 2-, SULFATE ION, ...
Authors:Walsh Jr, R.M, Polizzi, S.J, Wood, Z.A.
Deposit date:2013-08-08
Release date:2013-08-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Man o' war mutation in UDP-alpha-D-xylose synthase favors the abortive catalytic cycle and uncovers a latent potential for hexamer formation.
Biochemistry, 54, 2015
6C5A
DownloadVisualize
BU of 6c5a by Molmil
Human UDP-Glucose Dehydrogenase with UDP- Glc and NADH bound
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, DIMETHYL SULFOXIDE, UDP-glucose 6-dehydrogenase, ...
Authors:Gross, P.G, Fallah, J, Wood, Z.A.
Deposit date:2018-01-15
Release date:2019-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The A225L Substitution of hUGDH alters structure and function
To Be Published
5VCM
DownloadVisualize
BU of 5vcm by Molmil
Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase with bound UDP and Manganese
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, ...
Authors:Sanders, J.H, Kadirvelraj, R, Wood, Z.A.
Deposit date:2017-03-31
Release date:2018-04-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:HumanN-acetylglucosaminyltransferase II substrate recognition uses a modular architecture that includes a convergent exosite.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5TJH
DownloadVisualize
BU of 5tjh by Molmil
hUGDH A136M Substitution
Descriptor: CHLORIDE ION, PYROPHOSPHATE 2-, UDP-glucose 6-dehydrogenase, ...
Authors:Beattie, N.R, Wood, Z.A.
Deposit date:2016-10-04
Release date:2016-11-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Allostery and Hysteresis Are Coupled in Human UDP-Glucose Dehydrogenase.
Biochemistry, 56, 2017
5VCR
DownloadVisualize
BU of 5vcr by Molmil
Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase with bound uranium dioxide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, CHLORIDE ION, ...
Authors:Sanders, J.H, Kadirvelraj, R, Wood, Z.A.
Deposit date:2017-03-31
Release date:2018-04-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.992 Å)
Cite:HumanN-acetylglucosaminyltransferase II substrate recognition uses a modular architecture that includes a convergent exosite.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon