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PDB: 12929 results

6IRC
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BU of 6irc by Molmil
C-terminal domain of Drosophila phospholipase b NORPA, methylated
Descriptor: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase
Authors:Ye, F, Li, J, Huang, Y, Liu, W, Zhang, M.
Deposit date:2018-11-12
Release date:2019-01-02
Last modified:2020-10-28
Method:X-RAY DIFFRACTION (3.538 Å)
Cite:An unexpected INAD PDZ tandem-mediated plc beta binding in Drosophila photo receptors.
Elife, 7, 2018
6IGL
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BU of 6igl by Molmil
Crystal Structure of human ETB receptor in complex with IRL1620
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CITRIC ACID, Endothelin receptor type B,Endolysin,Endothelin receptor type B, ...
Authors:Shihoya, W, Izume, T, Inoue, A, Yamashita, K, kadji, F.M.N, Hirata, K, Aoki, J, Nishizawa, T, Nureki, O.
Deposit date:2018-09-25
Release date:2018-11-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of human ETBreceptor provide mechanistic insight into receptor activation and partial activation.
Nat Commun, 9, 2018
6ITO
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BU of 6ito by Molmil
Crystal structure of pyruvate kinase (PYK) from Mycobacterium tuberculosis in complex with Oxalate, AMP and inhibitor Ribose 5-Phosphate
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, OXALATE ION, ...
Authors:Zhong, W, Cai, Q, El Sahili, A, Mu, Y, Lescar, J, Dedon, P.C.
Deposit date:2018-11-24
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Pyruvate Kinase Regulates the Pentose-Phosphate Pathway in Response to Hypoxia in Mycobacterium tuberculosis.
J.Mol.Biol., 431, 2019
6IBU
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BU of 6ibu by Molmil
Apo Crh5 transglycosylase
Descriptor: GLYCEROL, Probable glycosidase crf1
Authors:Bartual, S.G, Fang, W, van Aalten, D.M.F.
Deposit date:2018-11-30
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Mechanisms of redundancy and specificity of the Aspergillus fumigatus Crh transglycosylases.
Nat Commun, 10, 2019
6IJM
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BU of 6ijm by Molmil
Apo structure of the N6-methyl-AMP Deaminase from Arabidopsis thaliana
Descriptor: Adenosine/AMP deaminase family protein, ZINC ION
Authors:Xie, W, Jia, Q.
Deposit date:2018-10-10
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.016 Å)
Cite:Alternative conformation induced by substrate binding for Arabidopsis thalianaN6-methyl-AMP deaminase.
Nucleic Acids Res., 47, 2019
6I61
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BU of 6i61 by Molmil
Crystal structure of human ERRg LBD in complex with bisphenol-B
Descriptor: 1,2-ETHANEDIOL, Estrogen-related receptor gamma, GLYCEROL, ...
Authors:Delfosse, V, Blanc, P, Bourguet, W.
Deposit date:2018-11-15
Release date:2019-07-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Insights into the activation mechanism of human estrogen-related receptor gamma by environmental endocrine disruptors.
Cell.Mol.Life Sci., 76, 2019
6INZ
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BU of 6inz by Molmil
Crystal structure of solute-binding protein complexed with unsaturated hyaluronan disaccharide
Descriptor: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Extracellular solute-binding protein family 1, ...
Authors:Oiki, S, Mikami, B, Murata, K, Hashimoto, W.
Deposit date:2018-10-29
Release date:2019-09-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.289 Å)
Cite:Substrate recognition by bacterial solute-binding protein is responsible for import of extracellular hyaluronan and chondroitin sulfate from the animal host.
Biosci.Biotechnol.Biochem., 83, 2019
6LXD
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BU of 6lxd by Molmil
Pri-miRNA bound DROSHA-DGCR8 complex
Descriptor: Microprocessor complex subunit DGCR8, RNA (102-mer), Ribonuclease 3, ...
Authors:Jin, W, Wang, J, Liu, C.P, Wang, H.W, Xu, R.M.
Deposit date:2020-02-10
Release date:2020-04-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural Basis for pri-miRNA Recognition by Drosha.
Mol.Cell, 78, 2020
6LK3
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BU of 6lk3 by Molmil
The Functional Characterization and Crystal Structure of Type II Peptidyl Carrier Protein ColA1a in Collismycins Biosynthesis
Descriptor: Putative free-standing acyl carrier protein
Authors:Ma, X.Y, Wang, G.Y, Liu, T, Chi, C.B, Zhang, Z.Y, Yang, D.H, Liu, W, Ma, M.
Deposit date:2019-12-18
Release date:2020-10-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The functional characterization and crystal structure of type II peptidyl carrier protein ColA1a in collismycins biosynthesis.
Chin.J.Chem., 38, 2020
6M7V
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BU of 6m7v by Molmil
Human DNA polymerase eta extension complex with cdA at the -1 position
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(P*(02I)P*CP*TP*CP*AP*CP*AP*CP*T)-3'), DNA (5'-D(P*GP*TP*GP*TP*GP*AP*GP*T)-3'), ...
Authors:Weng, P, Gao, Y, Yang, W.
Deposit date:2018-08-21
Release date:2018-09-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.062 Å)
Cite:Bypassing a 8,5'-cyclo-2'-deoxyadenosine lesion by human DNA polymerase eta at atomic resolution.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6LQI
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BU of 6lqi by Molmil
Cryo-EM structure of the mouse Piezo1 isoform Piezo1.1
Descriptor: Piezo-type mechanosensitive ion channel component 1
Authors:Geng, J, Liu, W, Zhou, H, Zhang, T, Wang, L, Zhang, M, Shen, B, Li, X, Xiao, B.
Deposit date:2020-01-13
Release date:2020-03-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:A Plug-and-Latch Mechanism for Gating the Mechanosensitive Piezo Channel.
Neuron, 106, 2020
5WCK
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BU of 5wck by Molmil
Native FEZ-1 metallo-beta-lactamase from Legionella gormanii
Descriptor: FEZ-1 protein, GLYCEROL, SULFATE ION, ...
Authors:Garcia-Saez, I, Mercuri, P.S, Kahn, R, Papamicael, C, Shabalin, I.G, Raczynska, J.E, Jaskolski, M, Minor, W, Frere, J.M, Galleni, M, Dideberg, O.
Deposit date:2017-06-30
Release date:2018-06-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Three-dimensional structure of FEZ-1, a monomeric subclass B3 metallo-beta-lactamase from Fluoribacter gormanii, in native form and in complex with D-captopril.
J. Mol. Biol., 325, 2003
6LXK
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BU of 6lxk by Molmil
Crystal structure of Z2B3 D102R Fab in complex with influenza virus neuraminidase from A/Serbia/NS-601/2014 (H1N1)
Descriptor: CALCIUM ION, Heavy chain of Z2B3-D102R Fab, Light chain of Z2B3-D102R Fab, ...
Authors:Jiang, H, Peng, W, Qi, J, Chai, Y, Song, H, Shi, Y, Gao, G.F, Wu, Y.
Deposit date:2020-02-11
Release date:2020-12-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.608 Å)
Cite:Structure-Based Modification of an Anti-neuraminidase Human Antibody Restores Protection Efficacy against the Drifted Influenza Virus.
Mbio, 11, 2020
6M0S
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BU of 6m0s by Molmil
3.6A Yeast Vo state3 prime
Descriptor: Uncharacterized protein YPR170W-B, V-type proton ATPase subunit a, vacuolar isoform, ...
Authors:Roh, S.H, Shekhar, M, Pintilie, G, Chipot, C, Wilkens, S, SIngharoy, A, Chiu, W.
Deposit date:2020-02-22
Release date:2020-11-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM and MD infer water-mediated proton transport and autoinhibition mechanisms of V o complex.
Sci Adv, 6, 2020
6M49
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BU of 6m49 by Molmil
cryo-EM structure of Scap/Insig complex in the present of 25-hydroxyl cholesterol.
Descriptor: 25-HYDROXYCHOLESTEROL, Insulin-induced gene 2 protein, Sterol regulatory element-binding protein cleavage-activating protein,Sterol regulatory element-binding protein cleavage-activating protein
Authors:Yan, R, Cao, P, Song, W, Qian, H, Du, X, Coates, H.W, Zhao, X, Li, Y, Gao, S, Gong, X, Liu, X, Sui, J, Lei, J, Yang, H, Brown, A.J, Zhou, Q, Yan, C, Yan, N.
Deposit date:2020-03-06
Release date:2021-01-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:A structure of human Scap bound to Insig-2 suggests how their interaction is regulated by sterols.
Science, 371, 2021
5US3
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BU of 5us3 by Molmil
Heterogeneous-backbone Foldamer Mimic of the Sp1-3 Zinc Finger
Descriptor: Heterogeneous-Backbone Variant of the Sp1-3 Zinc Finger: N-Me-Ala3, N-Me-Arg10, beta-3-Asp15, ...
Authors:George, K.L, Horne, W.S.
Deposit date:2017-02-13
Release date:2017-05-31
Last modified:2024-07-10
Method:SOLUTION NMR
Cite:Heterogeneous-Backbone Foldamer Mimics of Zinc Finger Tertiary Structure.
J. Am. Chem. Soc., 139, 2017
5V4T
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BU of 5v4t by Molmil
Protein 84 with aldehyde deformylating oxygenase activity from Sulfolobus tokodaii (orthorhombic form)
Descriptor: 1,2-ETHANEDIOL, FE (III) ION, hypothetic aldehyde deformylating oxygenase
Authors:Wilson, D.K, Mak, W.S, Siegel, J.B.
Deposit date:2017-03-10
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Protein 84 with aldehyde deformylating oxygenase activity from Sulfolobus tokodaii (orthorhombic form)
To Be Published
6JCI
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BU of 6jci by Molmil
Crystal structure of Prolyl Endopeptidase from Haliotis discus hannai with SUAM-14746
Descriptor: 1-[4-oxidanyl-2-(1,3-thiazolidin-3-ylcarbonyl)pyrrolidin-1-yl]-4-[2-[(~{E})-2-phenylethenyl]phenoxy]butan-1-one, GLYCEROL, Prolyl endopeptidase
Authors:Li, W, Cao, M.
Deposit date:2019-01-28
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.493 Å)
Cite:Crystal structure of Haliotis discus hannai Prolyl Endopeptidase
To Be Published
6JDQ
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BU of 6jdq by Molmil
Crystal structure of Nme1Cas9 in complex with sgRNA
Descriptor: CRISPR-associated endonuclease Cas9, sgRNA
Authors:Sun, W, Yang, J, Cheng, Z, Liu, C, Wang, K, Huang, X, Wang, Y.
Deposit date:2019-02-02
Release date:2019-11-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States.
Mol.Cell, 76, 2019
6IZJ
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BU of 6izj by Molmil
Structural characterization of mutated NreA protein in nitrate binding site from Staphylococcus aureus
Descriptor: 1,2-ETHANEDIOL, NITRATE ION, NreA
Authors:Sangare, L, Chen, W, Wang, C, Chen, X, Wu, M, Zhang, X, Zang, J.
Deposit date:2018-12-19
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into the conformational change of Staphylococcus aureus NreA at C-terminus.
Biotechnol.Lett., 42, 2020
6JJ8
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BU of 6jj8 by Molmil
Crystal structure of OsHXK6-ATP-Mg2+ complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:He, C, Wei, P, Chen, J, Wang, H, Wan, Y, Zhou, J, Zhu, Y, Huang, W, Yin, L.
Deposit date:2019-02-25
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of OsHXK6-ATP-Mg2+ complex
To Be Published
6LMX
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BU of 6lmx by Molmil
Cryo-EM structure of the CALHM chimeric construct (9-mer)
Descriptor: Calcium homeostasis modulator 1,Calcium homeostasis modulator protein 2
Authors:Demura, K, Kusakizako, T, Shihoya, W, Hiraizumi, M, Shimada, H, Yamashita, K, Nishizawa, T, Nureki, O.
Deposit date:2019-12-26
Release date:2020-07-29
Last modified:2020-09-09
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies.
Sci Adv, 6, 2020
6LK7
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BU of 6lk7 by Molmil
crystal structure of Os1348 from Pseudomonas sp. Os17
Descriptor: Nitrile hydratase, alpha chain
Authors:Takeuchi, K, Tsuchiya, W, Fujimoto, Z, Yamada, K, Someya, N, Yamazaki, T.
Deposit date:2019-12-18
Release date:2020-11-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Discovery of an Antibiotic-Related Small Protein of Biocontrol Strain Pseudomonas sp. Os17 by a Genome-Mining Strategy.
Front Microbiol, 11, 2020
6LMU
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BU of 6lmu by Molmil
Cryo-EM structure of the human CALHM2
Descriptor: Calcium homeostasis modulator protein 2
Authors:Demura, K, Kusakizako, T, Shihoya, W, Hiraizumi, M, Shimada, H, Yamashita, K, Nishizawa, T, Nureki, O.
Deposit date:2019-12-26
Release date:2020-07-29
Last modified:2020-09-09
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies.
Sci Adv, 6, 2020
6LPB
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BU of 6lpb by Molmil
Cryo-EM structure of the human PAC1 receptor coupled to an engineered heterotrimeric G protein
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short,Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Kobayashi, K, Shihoya, W, Nishizawa, T, Nureki, O.
Deposit date:2020-01-09
Release date:2020-03-11
Last modified:2020-03-25
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structure of the human PAC1 receptor coupled to an engineered heterotrimeric G protein.
Nat.Struct.Mol.Biol., 27, 2020

223532

数据于2024-08-07公开中

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