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PDB: 13052 results

2LQW
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Solution structure of phosphorylated CRKL
Descriptor: Crk-like protein
Authors:Jankowski, W, Saleh, T, Kalodimos, C.
Deposit date:2012-03-16
Release date:2012-05-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Domain organization differences explain Bcr-Abl's preference for CrkL over CrkII.
Nat.Chem.Biol., 8, 2012
6AGF
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Structure of the human voltage-gated sodium channel Nav1.4 in complex with beta1
Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pan, X.J, li, Z.Q, Zhou, Q, Shen, H.Z, Wu, K, Huang, X.S, Chen, J.F, Zhang, J.R, Zhu, X.C, Lei, J.L, Xiong, W, Gong, H.P, Xiao, B.L, Yan, N.
Deposit date:2018-08-11
Release date:2018-10-10
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the human voltage-gated sodium channel Nav1.4 in complex with beta 1.
Science, 362, 2018
6LMU
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Cryo-EM structure of the human CALHM2
Descriptor: Calcium homeostasis modulator protein 2
Authors:Demura, K, Kusakizako, T, Shihoya, W, Hiraizumi, M, Shimada, H, Yamashita, K, Nishizawa, T, Nureki, O.
Deposit date:2019-12-26
Release date:2020-07-29
Last modified:2020-09-09
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies.
Sci Adv, 6, 2020
6A6R
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Crystal structure of the modified fructosyl peptide oxidase from Aspergillus nidulans, Seleno-methionine Derivative
Descriptor: (4S,5S)-1,2-DITHIANE-4,5-DIOL, FLAVIN-ADENINE DINUCLEOTIDE, Fructosyl amine: oxygen oxidoreductase, ...
Authors:Ogawa, N, Maruyama, Y, Itoh, T, Hashimoto, W, Murata, K.
Deposit date:2018-06-29
Release date:2019-05-15
Method:X-RAY DIFFRACTION (2.609 Å)
Cite:Creation of haemoglobin A1c direct oxidase from fructosyl peptide oxidase by combined structure-based site specific mutagenesis and random mutagenesis.
Sci Rep, 9, 2019
1R5I
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Crystal structure of the MAM-MHC complex
Descriptor: HLA class II histocompatibility antigen, DR alpha chain, DRB1-1 beta chain, ...
Authors:Zhao, Y, Li, Z, Drozd, S.J, Guo, Y, Mourad, W, Li, H.
Deposit date:2003-10-10
Release date:2004-03-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Mycoplasma arthritidis mitogen complexed with HLA-DR1 reveals a novel superantigen fold and a dimerized superantigen-MHC complex.
Structure, 12, 2004
6LPB
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BU of 6lpb by Molmil
Cryo-EM structure of the human PAC1 receptor coupled to an engineered heterotrimeric G protein
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short,Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Kobayashi, K, Shihoya, W, Nishizawa, T, Nureki, O.
Deposit date:2020-01-09
Release date:2020-03-11
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structure of the human PAC1 receptor coupled to an engineered heterotrimeric G protein.
Nat.Struct.Mol.Biol., 27, 2020
1X56
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BU of 1x56 by Molmil
Crystal structure of asparaginyl-tRNA synthetase from Pyrococcus horikoshii
Descriptor: Asparaginyl-tRNA synthetase
Authors:Iwasaki, W, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-15
Release date:2006-05-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural Basis of the Water-assisted Asparagine Recognition by Asparaginyl-tRNA Synthetase.
J.Mol.Biol., 360, 2006
2LRJ
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BU of 2lrj by Molmil
NMR solution structure of staphyloxanthin biosynthesis protein
Descriptor: Staphyloxanthin biosynthesis protein, putative
Authors:Zhang, Y, Winsor, J, Anderson, W, Radhakrishnan, I, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-04-03
Release date:2012-04-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of a putative S. aureus enzyme involved in the biosynthesis of staphyloxanthin
To be Published
5XRZ
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BU of 5xrz by Molmil
Structure of a ssDNA bound to the inner DNA binding site of RAD52
Descriptor: DNA repair protein RAD52 homolog, POTASSIUM ION, ssDNA (40-MER)
Authors:Saotome, M, Saito, K, Yasuda, T, Sugiyama, S, Kurumizaka, H, Kagawa, W.
Deposit date:2017-06-11
Release date:2018-04-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural Basis of Homology-Directed DNA Repair Mediated by RAD52
iScience, 3, 2018
2LCC
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BU of 2lcc by Molmil
Solution structure of RBBP1 chromobarrel domain
Descriptor: AT-rich interactive domain-containing protein 4A
Authors:Gong, W, Feng, Y.
Deposit date:2011-04-28
Release date:2012-02-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insight into recognition of methylated histone tails by retinoblastoma-binding protein 1.
J.Biol.Chem., 2012
6ACC
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BU of 6acc by Molmil
Trypsin-cleaved and low pH-treated SARS-CoV spike glycoprotein and ACE2 complex, ACE2-free conformation with three RBD in down conformation
Descriptor: Spike glycoprotein
Authors:Gui, M, Song, W.
Deposit date:2018-07-26
Release date:2018-08-08
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of the SARS coronavirus spike glycoprotein in complex with its host cell receptor ACE2.
PLoS Pathog., 14, 2018
5XS8
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BU of 5xs8 by Molmil
Crystal structure of solute-binding protein complexed with unsaturated chondroitin disaccharide with two sulfate groups at C-4 and C-6 positions of GalNAc
Descriptor: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4,6-di-O-sulfo-beta-D-galactopyranose, CALCIUM ION, Extracellular solute-binding protein family 1
Authors:Oiki, S, Kamochi, R, Mikami, B, Murata, K, Hashimoto, W.
Deposit date:2017-06-12
Release date:2018-01-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Alternative substrate-bound conformation of bacterial solute-binding protein involved in the import of mammalian host glycosaminoglycans.
Sci Rep, 7, 2017
6ACD
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BU of 6acd by Molmil
Trypsin-cleaved and low pH-treated SARS-CoV spike glycoprotein and ACE2 complex, ACE2-free conformation with one RBD in up conformation
Descriptor: Spike glycoprotein
Authors:Gui, M, Song, W.
Deposit date:2018-07-26
Release date:2018-08-08
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structure of the SARS coronavirus spike glycoprotein in complex with its host cell receptor ACE2.
PLoS Pathog., 14, 2018
5XTO
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BU of 5xto by Molmil
Crystal structure of baculoviral sulfhydryl oxidase P33 (H114A mutant)
Descriptor: FAD-linked sulfhydryl oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kuang, W, Hu, Z, Gong, P.
Deposit date:2017-06-20
Release date:2017-09-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Three Conserved Regions in Baculovirus Sulfhydryl Oxidase P33 Are Critical for Enzymatic Activity and Function
J. Virol., 91, 2017
6LMX
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BU of 6lmx by Molmil
Cryo-EM structure of the CALHM chimeric construct (9-mer)
Descriptor: Calcium homeostasis modulator 1,Calcium homeostasis modulator protein 2
Authors:Demura, K, Kusakizako, T, Shihoya, W, Hiraizumi, M, Shimada, H, Yamashita, K, Nishizawa, T, Nureki, O.
Deposit date:2019-12-26
Release date:2020-07-29
Last modified:2020-09-09
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies.
Sci Adv, 6, 2020
1S5O
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BU of 1s5o by Molmil
Structural and Mutational Characterization of L-carnitine Binding to Human carnitine Acetyltransferase
Descriptor: CARNITINE, carnitine acetyltransferase isoform 2
Authors:Govindasamy, L, Kukar, T, Lian, W, Pedersen, B, Gu, Y, Agbandje-Mckenna, M, Jin, S, Mckenna, R, Wu, D.
Deposit date:2004-01-21
Release date:2004-02-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and mutational characterization of l-carnitine binding to human carnitine acetyltransferase.
J.Struct.Biol., 146, 2004
1EJQ
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BU of 1ejq by Molmil
SOLUTION STRUCTURE OF THE SYNDECAN-4 WHOLE CYTOPLASMIC DOMAIN IN THE PRESENCE OF PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE
Descriptor: SYNDECAN-4
Authors:Shin, J, Oh, E.S, Lee, D, Couchman, J.R, Lee, W.
Deposit date:2000-03-04
Release date:2001-03-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:SOLUTION STRUCTURE OF THE SYNDECAN-4 WHOLE CYTOPLASMIC DOMAIN IN THE PRESENCE OF PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE
To be Published
4V06
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BU of 4v06 by Molmil
Crystal structure of human tryptophan hydroxylase 2 (TPH2), catalytic domain
Descriptor: FE (III) ION, IMIDAZOLE, TRYPTOPHAN 5-HYDROXYLASE 2
Authors:Kopec, J, Oberholzer, A, Fitzpatrick, F, Newman, J, Tallant, C, Kiyani, W, Shrestha, L, Burgess-Brown, N, von Delft, F, Arrowsmith, C, Edwards, A, Bountra, C, Yue, W.W.
Deposit date:2014-09-11
Release date:2014-10-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Crystal Structure of Human Tryptophane Hydroxylase 2 (Tph2), Catalytic Domain
To be Published
2LOQ
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BU of 2loq by Molmil
Backbone structure of human membrane protein FAM14B (Interferon alpha-inducible protein 27-like protein 1)
Descriptor: Interferon alpha-inducible protein 27-like protein 1
Authors:Klammt, C, Chui, E.J, Maslennikov, I, Kwiatkowski, W, Choe, S.
Deposit date:2012-01-26
Release date:2012-05-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Facile backbone structure determination of human membrane proteins by NMR spectroscopy.
Nat.Methods, 9, 2012
5X32
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BU of 5x32 by Molmil
Crystal structure of D-mannose isomerase
Descriptor: N-acylglucosamine 2-epimerase, PHOSPHATE ION
Authors:Kato, K, Saburi, W, Yao, M.
Deposit date:2017-02-03
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.586 Å)
Cite:Biochemical and structural characterization of Marinomonas mediterranead-mannose isomerase Marme_2490 phylogenetically distant from known enzymes
Biochimie, 144, 2018
6M7O
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BU of 6m7o by Molmil
Human DNA polymerase eta ternary complex with Mn2+ and dTMPNPP oppositing cdA
Descriptor: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*AP*TP*(02I)P*CP*TP*CP*AP*CP*AP*CP*T)-3'), DNA (5'-D(P*AP*GP*TP*GP*TP*GP*AP*G*(1FZ))-3'), ...
Authors:Weng, P, Gao, Y, Yang, W.
Deposit date:2018-08-20
Release date:2018-09-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Bypassing a 8,5'-cyclo-2'-deoxyadenosine lesion by human DNA polymerase eta at atomic resolution.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5X89
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The X-ray crystal structure of subunit fusion RNA splicing endonuclease from Methanopyrus kandleri
Descriptor: EndA-like protein,tRNA-splicing endonuclease, PHOSPHATE ION
Authors:Kaneta, A, Fujishima, K, Morikazu, W, Hori, H, Hirata, A.
Deposit date:2017-03-01
Release date:2018-01-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:The RNA-splicing endonuclease from the euryarchaeaon Methanopyrus kandleri is a heterotetramer with constrained substrate specificity
Nucleic Acids Res., 46, 2018
6M8Z
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BU of 6m8z by Molmil
Crystal structure of human DJ-1 without a modification on Cys-106
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, Protein/nucleic acid deglycase DJ-1
Authors:Shumilin, I.A, Shabalin, I.G, Shumilina, S.V, Werenskjold, C, Utepbergenov, D, Minor, W.
Deposit date:2018-08-22
Release date:2018-09-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:A transient post-translational modification of active site cysteine alters binding properties of the parkinsonism protein DJ-1.
Biochem. Biophys. Res. Commun., 504, 2018
5X8Y
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BU of 5x8y by Molmil
A Mutation identified in Neonatal Microcephaly Destabilizes Zika Virus NS1 Assembly in vitro
Descriptor: ZIKV NS1
Authors:Wang, D, Chen, C, Liu, S, Zhou, H, Yang, K, Zhao, Q, Ji, X, Chen, C, Xie, W, Wang, Z, Mi, L.Z, Yang, H.
Deposit date:2017-03-03
Release date:2017-05-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.817 Å)
Cite:A Mutation Identified in Neonatal Microcephaly Destabilizes Zika Virus NS1 Assembly in Vitro
Sci Rep, 7, 2017
4E9B
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BU of 4e9b by Molmil
Structure of Peptide Deformylase form Helicobacter Pylori in complex with actinonin
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACTINONIN, COBALT (II) ION, ...
Authors:Cui, K, Zhu, L, Lu, W, Huang, J.
Deposit date:2012-03-20
Release date:2013-04-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification of Novel Peptide Deformylase Inhibitors from Natural Products
To be Published

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PDB entries from 2024-10-09

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