1X56

Crystal structure of asparaginyl-tRNA synthetase from Pyrococcus horikoshii

Summary for 1X56

Related1X54 1X56
DescriptorAsparaginyl-tRNA synthetase (2 entities in total)
Functional Keywordsaminoacyl-trna synthetase, riken structural genomics/proteomics initiative, rsgi, structural genomics, ligase
Biological sourcePyrococcus horikoshii
Cellular locationCytoplasm O57980
Total number of polymer chains1
Total molecular weight50228.55
Authors
Iwasaki, W.,Sekine, S.,Yokoyama, S.,RIKEN Structural Genomics/Proteomics Initiative (RSGI) (deposition date: 2005-05-15, release date: 2006-05-23, Last modification date: 2011-07-13)
Primary citation
Iwasaki, W.,Sekine, S.,Kuroishi, C.,Kuramitsu, S.,Shirouzu, M.,Yokoyama, S.
Structural Basis of the Water-assisted Asparagine Recognition by Asparaginyl-tRNA Synthetase.
J.Mol.Biol., 360:329-342, 2006
PubMed: 16753178 (PDB entries with the same primary citation)
DOI: 10.1016/j.jmb.2006.04.068
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.98 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.212302.7%2.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 1x56
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Molmil generated image of 1x56
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Molmil generated image of 1x56
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More Biological unit images

Molmil generated image of 1x56
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Molmil generated image of 1x56
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Molmil generated image of 1x56
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(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (1x56.pdb1.gz [146.84 KB])