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PDB: 1306 results

4HSR
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Crystal Structure of a class III engineered cephalosporin acylase
Descriptor: 5,5-dihydroxy-L-norvaline, glutaryl-7-aminocephalosporanic acid acylase alpha chain, glutaryl-7-aminocephalosporanic acid acylase beta chain
Authors:Vrielink, A, Golden, E, Patterson, R, Tie, W.J, Anandan, A, Flematti, G, Molla, G, Rosini, E, Pollegioni, L.
Deposit date:2012-10-30
Release date:2013-02-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structure of a class III engineered cephalosporin acylase: comparisons with class I acylase and implications for differences in substrate specificity and catalytic activity.
Biochem.J., 451, 2013
4J0D
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tannin acyl hydrolase from Lactobacillus plantarum (Cadmium)
Descriptor: CADMIUM ION, DI(HYDROXYETHYL)ETHER, TETRAETHYLENE GLYCOL, ...
Authors:Ren, B, Wu, M, Wang, Q, Peng, X, Wen, H, Chen, Q, McKinstry, W.J.
Deposit date:2013-01-30
Release date:2013-05-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of tannase from Lactobacillus plantarum.
J.Mol.Biol., 425, 2013
4J0H
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Tannin acyl hydrolase in complex with gallic acid
Descriptor: 3,4,5-trihydroxybenzoic acid, DI(HYDROXYETHYL)ETHER, TETRAETHYLENE GLYCOL, ...
Authors:Ren, B, Wu, M, Wang, Q, Peng, X, Wen, H, Chen, Q, McKinstry, W.J.
Deposit date:2013-01-30
Release date:2013-05-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of tannase from Lactobacillus plantarum.
J.Mol.Biol., 425, 2013
4A7A
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BU of 4a7a by Molmil
Crystal structure of human monoamine oxidase B (MAO B) in complex with rosiglitazone
Descriptor: (R)-ROSIGLITAZONE, AMINE OXIDASE [FLAVIN-CONTAINING] B, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Binda, C, Aldeco, M, Geldenhuys, W.J, Tortorici, M, Mattevi, A, Edmondson, D.E.
Deposit date:2011-11-11
Release date:2012-04-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular Insights Into Human Monoamine Oxidase B Inhibition by the Glitazone Anti-Diabetes Drugs
Acs Med. Chem. Lett., 3, 2012
4A79
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Crystal structure of human monoamine oxidase B (MAO B) in complex with pioglitazone
Descriptor: (5R)-5-{4-[2-(5-ethylpyridin-2-yl)ethoxy]benzyl}-1,3-thiazolidine-2,4-dione, AMINE OXIDASE [FLAVIN-CONTAINING] B, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Binda, C, Aldeco, M, Geldenhuys, W.J, Tortorici, M, Mattevi, A, Edmondson, D.E.
Deposit date:2011-11-11
Release date:2012-04-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Molecular Insights Into Human Monoamine Oxidase B Inhibition by the Glitazone Anti-Diabetes Drugs
Acs Med. Chem. Lett., 3, 2012
3XIM
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BU of 3xim by Molmil
ARGININE RESIDUES AS STABILIZING ELEMENTS IN PROTEINS
Descriptor: COBALT (II) ION, D-XYLOSE ISOMERASE, sorbitol
Authors:Mrabet, N.T, Van Denbroek, A, Van Den Brande, I, Stanssens, P, Laroche, Y, Lambeir, A.-M, Matthyssens, G, Jenkins, J, Chiadmi, M, Vantilbeurgh, H, Rey, F, Janin, J, Quax, W.J, Lasters, I, Demaeyer, M, Wodak, S.J.
Deposit date:1991-05-29
Release date:1993-04-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Arginine residues as stabilizing elements in proteins.
Biochemistry, 31, 1992
4IFS
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BU of 4ifs by Molmil
Crystal structure of the hSSRP1 Middle domain
Descriptor: CHLORIDE ION, FACT complex subunit SSRP1
Authors:Zhang, W.J, Zeng, F.X, Shao, C, Liu, Y.W, Niu, L.W, Li, X, Teng, M.K.
Deposit date:2012-12-15
Release date:2014-01-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of the hSSRP1 Middle domain
To be Published
4IJH
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Fragment-based Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A
Descriptor: 3-chloro-6-[3-(4-fluorophenyl)-5-sulfanyl-4H-1,2,4-triazol-4-yl]-1-benzothiophene-2-carboxylic acid, Replication protein A 70 kDa DNA-binding subunit
Authors:Feldkamp, M.D, Patrone, J.D, Kennedy, J.P, Frank, A.O, Vangamudi, B, Pelz, N.F, Rossanese, O.W, Waterson, A.G, Fesik, S.W, Chazin, W.J.
Deposit date:2012-12-21
Release date:2013-08-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.498 Å)
Cite:Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A.
ACS MED.CHEM.LETT., 4, 2013
4IJL
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Fragment-based Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A
Descriptor: Replication protein A 70 kDa DNA-binding subunit, {[5-(3-chloro-1-benzothiophen-2-yl)-4-phenyl-4H-1,2,4-triazol-3-yl]sulfanyl}acetic acid
Authors:Feldkamp, M.D, Patrone, J.D, Kennedy, J.P, Frank, A.O, Vangamudi, B, Pelz, N.F, Rossanese, O.W, Waterson, A.G, Fesik, S.W, Chazin, W.J.
Deposit date:2012-12-21
Release date:2013-08-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A.
ACS MED.CHEM.LETT., 4, 2013
4FXX
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BU of 4fxx by Molmil
Structure of SF1 coiled-coil domain
Descriptor: IMIDAZOLE, MALONATE ION, Splicing factor 1
Authors:Gupta, A, Bauer, W.J, Wang, W, Kielkopf, C.L.
Deposit date:2012-07-03
Release date:2013-01-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4801 Å)
Cite:Structure of Phosphorylated SF1 Bound to U2AF(65) in an Essential Splicing Factor Complex.
Structure, 21, 2013
4JUI
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crystal structure of tannase from from Lactobacillus plantarum
Descriptor: DI(HYDROXYETHYL)ETHER, TETRAETHYLENE GLYCOL, TRIETHYLENE GLYCOL, ...
Authors:Ren, B, Wu, M, Wang, Q, Peng, X, Wen, H, McKinstry, W.J, Chen, Q.
Deposit date:2013-03-24
Release date:2013-05-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of tannase from Lactobacillus plantarum.
J.Mol.Biol., 425, 2013
2IVH
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BU of 2ivh by Molmil
Crystal structure of the nuclease domain of ColE7 (H545Q mutant) in complex with an 18-bp duplex DNA
Descriptor: 5'-D(*GP*GP*AP*AP*TP*TP*CP*GP*AP*TP *CP*GP*AP*AP*TP*TP*CP*C)-3', COLCIN-E7, ZINC ION
Authors:Wang, Y.T, Yang, W.J, Li, C.L, Doudeva, L.G, Yuan, H.S.
Deposit date:2006-06-13
Release date:2007-01-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for Sequence-Dependent DNA Cleavage by Nonspecific Endonucleases.
Nucleic Acids Res., 35, 2007
8SJC
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BU of 8sjc by Molmil
Crystal structure of Zn2+ bound calprotectin
Descriptor: CALCIUM ION, MAGNESIUM ION, PENTAETHYLENE GLYCOL, ...
Authors:Perera, Y.R, Garcia, V, Guillen, R.M, Chazin, W.J.
Deposit date:2023-04-17
Release date:2024-07-03
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure of Zn2+ bound calprotectin
To Be Published
8SJB
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Crystal structure of Zn2+ bound calprotectin variant H87C
Descriptor: CALCIUM ION, NONAETHYLENE GLYCOL, Protein S100-A8, ...
Authors:Perera, Y.R, Rodriguez, A.M, Garcia, V, Guillen, R.M, Chazin, W.J.
Deposit date:2023-04-17
Release date:2024-07-03
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of Zn2+ bound calprotectin
To Be Published
2J9K
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Atomic-resolution Crystal Structure of Chemically-Synthesized HIV-1 Protease Complexed with Inhibitor MVT-101
Descriptor: ACETATE ION, GLYCEROL, N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, ...
Authors:Malito, E, Shen, Y, Johnson, E.C.B, Tang, W.J.
Deposit date:2006-11-11
Release date:2007-08-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Insights from Atomic-Resolution X-Ray Structures of Chemically Synthesized HIV-1 Protease in Complex with Inhibitors.
J.Mol.Biol., 373, 2007
8TNE
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BU of 8tne by Molmil
Crystal structure of bacterial pectin methylesterase Pme8A from rumen Butyrivibrio
Descriptor: 1,2-ETHANEDIOL, Pectinesterase
Authors:Carbone, V, Reilly, K, Sang, C, Schofield, L, Ronimus, R, Kelly, W.J, Attwood, G.T, Palevich, N.
Deposit date:2023-08-01
Release date:2023-08-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Bacterial Pectin Methylesterases Pme8A and PmeC2 from Rumen Butyrivibrio .
Int J Mol Sci, 24, 2023
8TMS
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BU of 8tms by Molmil
Crystal structure of bacterial pectin methylesterase PmeC2 from rumen Butyrivibrio
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Pectinesterase
Authors:Carbone, V, Reilly, K, Sang, C, Schofield, L, Ronimus, R, Kelly, W.J, Attwood, G.T, Palevich, N.
Deposit date:2023-07-30
Release date:2023-08-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Bacterial Pectin Methylesterases Pme8A and PmeC2 from Rumen Butyrivibrio .
Int J Mol Sci, 24, 2023
2JG4
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BU of 2jg4 by Molmil
Substrate-free IDE structure in its closed conformation
Descriptor: 1,4-DIETHYLENE DIOXIDE, INSULIN DEGRADING ENZYME, ZINC ION
Authors:Malito, E, Tang, W.J.
Deposit date:2007-02-07
Release date:2007-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of Substrate-Free Human Insulin Degrading Enzyme (Ide) and Biophysical Analysis of ATP-Induced Conformational Switch of Ide
J.Biol.Chem., 282, 2007
2JBU
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Crystal structure of human insulin degrading enzyme complexed with co- purified peptides.
Descriptor: 1,4-DIETHYLENE DIOXIDE, CO-PURIFIED PEPTIDE, INSULIN-DEGRADING ENZYME
Authors:Im, H, Shen, Y, Tang, W.J.
Deposit date:2006-12-11
Release date:2007-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of Substrate-Free Human Insulin Degrading Enzyme (Ide) and Biophysical Analysis of ATP-Induced Conformational Switch of Ide
J.Biol.Chem., 282, 2007
2JTT
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BU of 2jtt by Molmil
Solution structure of calcium loaded S100A6 bound to C-terminal Siah-1 interacting protein
Descriptor: Calcyclin-binding protein, Protein S100-A6
Authors:Lee, Y, Chazin, W.J.
Deposit date:2007-08-06
Release date:2008-08-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the S100A6 complex with a fragment from the C-terminal domain of Siah-1 interacting protein: a novel mode for S100 protein target recognition.
Biochemistry, 47, 2008
2JMS
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BU of 2jms by Molmil
NMR Structure of En-6 pheromone from the Antarctic Ciliate Euplotes nobilii
Descriptor: Pheromone En-6
Authors:Pedrini, B, Placzek, W.J, Koculi, E, Alimenti, C, LaTerza, A, Luporini, P, Wuthrich, K.
Deposit date:2006-11-29
Release date:2007-09-04
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Cold-adaptation in Sea-water-borne Signal Proteins: Sequence and NMR Structure of the Pheromone En-6 from the Antarctic Ciliate Euplotes nobilii
J.Mol.Biol., 372, 2007
2J9J
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Atomic-resolution Crystal Structure of Chemically-Synthesized HIV-1 Protease Complexed with Inhibitor JG-365
Descriptor: ACETATE ION, GLYCEROL, INHIBITOR MOLECULE JG365, ...
Authors:Malito, E, Shen, Y, Johnson, E.C.B, Tang, W.J.
Deposit date:2006-11-11
Release date:2007-08-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Insights from Atomic-Resolution X-Ray Structures of Chemically Synthesized HIV-1 Protease in Complex with Inhibitors.
J.Mol.Biol., 373, 2007
2IVK
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Crystal structure of the periplasmic endonuclease Vvn complexed with a 16-bp DNA
Descriptor: 5'-D(*AP*AP*TP*TP*CP*GP*AP*TP*CP*GP *AP*AP*TP*TP*C)-3', 5'-D(*GP*AP*AP*TP*TP*CP*GP*AP*TP*CP *GP*AP*AP*TP*T)-3', 5'-D(*GP*AP*AP*TP*TP*CP*GP*AP*TP*CP *GP*AP*AP*TP*TP*C)-3', ...
Authors:Wang, Y.T, Yang, W.J, Li, C.L, Doudeva, L.G, Yuan, H.S.
Deposit date:2006-06-14
Release date:2007-01-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Basis for Sequence-Dependent DNA Cleavage by Nonspecific Endonucleases.
Nucleic Acids Res., 35, 2007
8U5Y
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human RADX trimer bound to ssDNA
Descriptor: DNA (25-MER), RPA-related protein RADX
Authors:Balakrishnan, S, Chazin, W.J.
Deposit date:2023-09-13
Release date:2023-10-11
Last modified:2023-10-18
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Structure of RADX and mechanism for regulation of RAD51 nucleofilaments.
Biorxiv, 2023
8U61
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Human RADX tetramer bound to ssDNA
Descriptor: RPA-related protein RADX, dT25 DNA (25-MER)
Authors:Balakrishnan, S, Chazin, W.J.
Deposit date:2023-09-13
Release date:2024-01-31
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of RADX and mechanism for regulation of RAD51 nucleofilaments.
Proc.Natl.Acad.Sci.USA, 121, 2024

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PDB entries from 2024-09-04

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