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PDB: 12521 results

1MFM
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BU of 1mfm by Molmil
MONOMERIC HUMAN SOD MUTANT F50E/G51E/E133Q AT ATOMIC RESOLUTION
Descriptor: CADMIUM ION, CHLORIDE ION, COPPER (II) ION, ...
Authors:Ferraroni, M, Rypniewski, W, Wilson, K.S, Orioli, P.L, Viezzoli, M.S, Banci, L, Bertini, I, Mangani, S.
Deposit date:1999-04-16
Release date:1999-04-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:The crystal structure of the monomeric human SOD mutant F50E/G51E/E133Q at atomic resolution. The enzyme mechanism revisited.
J.Mol.Biol., 288, 1999
6BHI
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BU of 6bhi by Molmil
Crystal structure of SETDB1 with a modified H3 peptide
Descriptor: Histone H3.1, Histone-lysine N-methyltransferase SETDB1, UNKNOWN ATOM OR ION
Authors:Qin, S, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2017-10-30
Release date:2017-12-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:H3K14ac is linked to methylation of H3K9 by the triple Tudor domain of SETDB1.
Nat Commun, 8, 2017
1Y17
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BU of 1y17 by Molmil
crystal structure of Aa-X-bp-II, a snake venom protein with the activity of binding to coagulation factor X from Agkistrodon acutus
Descriptor: CALCIUM ION, anticoagulant protein A, anticoagulant protein-B
Authors:Zhu, Z, Liu, S, Mo, X, Yu, X, Liang, Z, Zang, J, Zhao, W, Teng, M, Niu, L.
Deposit date:2004-11-17
Release date:2006-03-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Characterizations and Crystal structures of two snake venom proteins with the activity of binding coagulation factor X from Agkistrodon acutus
To be Published
1L7P
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SUBSTRATE BOUND PHOSPHOSERINE PHOSPHATASE COMPLEX STRUCTURE
Descriptor: PHOSPHATE ION, PHOSPHOSERINE, PHOSPHOSERINE PHOSPHATASE
Authors:Wang, W, Cho, H.S, Kim, R, Jancarik, J, Yokota, H, Nguyen, H.H, Grigoriev, I.V, Wemmer, D.E, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-03-16
Release date:2002-06-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural characterization of the reaction pathway in phosphoserine phosphatase: crystallographic "snapshots" of intermediate states.
J.Mol.Biol., 319, 2002
1Y57
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Structure of unphosphorylated c-Src in complex with an inhibitor
Descriptor: 4-[(4-METHYLPIPERAZIN-1-YL)METHYL]-N-{3-[(4-PYRIDIN-3-YLPYRIMIDIN-2-YL)AMINO]PHENYL}BENZAMIDE, Proto-oncogene tyrosine-protein kinase Src, SULFATE ION
Authors:Cowan-Jacob, S.W, Fendrich, G, Manley, P.W, Jahnke, W, Fabbro, D, Liebetanz, J, Meyer, T.
Deposit date:2004-12-02
Release date:2005-06-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:The Crystal Structure of a c-Src Complex in an Active Conformation Suggests Possible Steps in c-Src Activation
Structure, 13, 2005
6CTA
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BU of 6cta by Molmil
Structure of the human cGAS-DNA complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, DNA (5'-D(*AP*AP*AP*TP*TP*GP*CP*CP*GP*AP*AP*GP*AP*CP*GP*A)-3'), ...
Authors:Zhou, W, Whiteley, A.T, de Oliveira Mann, C.C, Morehouse, B.R, Mekalanos, J.J, Kranzusch, P.J.
Deposit date:2018-03-22
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.779 Å)
Cite:Structure of the Human cGAS-DNA Complex Reveals Enhanced Control of Immune Surveillance.
Cell, 174, 2018
6CQE
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BU of 6cqe by Molmil
Crystal structure of HPK1 kinase domain S171A mutant
Descriptor: Mitogen-activated protein kinase kinase kinase kinase 1
Authors:Wu, P, Lehoux, I, Mortara, K, Franke, Y, Wang, W.
Deposit date:2018-03-15
Release date:2018-12-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.886 Å)
Cite:Hematopoietic Progenitor Kinase-1 Structure in a Domain-Swapped Dimer.
Structure, 27, 2019
1Y6B
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Crystal structure of VEGFR2 in complex with a 2-anilino-5-aryl-oxazole inhibitor
Descriptor: N-(CYCLOPROPYLMETHYL)-4-(METHYLOXY)-3-({5-[3-(3-PYRIDINYL)PHENYL]-1,3-OXAZOL-2-YL}AMINO)BENZENESULFONAMIDE, Vascular endothelial growth factor receptor 2
Authors:Harris, P.A, Cheung, M, Hunter, R.N, Brown, M.L, Veal, J.M, Nolte, R.T, Wang, L, Liu, W, Crosby, R.M, Johnson, J.H, Epperly, A.H, Kumar, R, Luttrell, D.K, Stafford, J.A.
Deposit date:2004-12-05
Release date:2005-06-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery and evaluation of 2-anilino-5-aryloxazoles as a novel class of VEGFR2 kinase inhibitors.
J.Med.Chem., 48, 2005
3V5S
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BU of 3v5s by Molmil
Structure of Sodium/Calcium Exchanger from Methanococcus jannaschii
Descriptor: CADMIUM ION, Sodium/Calcium Exchanger
Authors:Liao, J, Li, H, Zeng, W, Sauer, D.B, Belmares, R, Jiang, Y.
Deposit date:2011-12-16
Release date:2012-02-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural insight into the ion-exchange mechanism of the sodium/calcium exchanger.
Science, 335, 2012
1MPV
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BU of 1mpv by Molmil
Structure of bhpBR3, the BAFF-binding loop of BR3 embedded in a beta-hairpin peptide
Descriptor: BLyS Receptor 3
Authors:Kayagaki, N, Yan, M, Seshasayee, D, Wang, H, Lee, W, French, D.M, Grewal, I.S, Cochran, A.G, Gordon, N.C, Yin, J, Starovasnik, M.A, Dixit, V.M.
Deposit date:2002-09-12
Release date:2002-10-30
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:BAFF/BLyS receptor 3 binds the B cell survival factor BAFF ligand through a discrete surface loop and promotes processing of NF-kappaB2.
Immunity, 17, 2002
1Y3P
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BU of 1y3p by Molmil
Structure of AlgQ1, alginate-binding protein, complexed with an alginate tetrasaccharide
Descriptor: AlgQ1, CALCIUM ION, beta-D-mannopyranuronic acid-(1-4)-alpha-D-mannopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-D-mannopyranuronic acid
Authors:Momma, K, Mishima, Y, Hashimoto, W, Mikami, B, Murata, K.
Deposit date:2004-11-26
Release date:2005-04-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Direct Evidence for Sphingomonas sp. A1 Periplasmic Proteins as Macromolecule-Binding Proteins Associated with the ABC Transporter: Molecular Insights into Alginate Transport in the Periplasm(,)
Biochemistry, 44, 2005
1Y76
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BU of 1y76 by Molmil
Solution Structure of Patj/Pals1 L27 Domain Complex
Descriptor: MAGUK p55 subfamily member 5, protein associated to tight junctions
Authors:Feng, W, Long, J.-F, Zhang, M.
Deposit date:2004-12-08
Release date:2005-04-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:A unified assembly mode revealed by the structures of tetrameric L27 domain complexes formed by mLin-2/mLin-7 and Patj/Pals1 scaffold proteins.
Proc.Natl.Acad.Sci.Usa, 102, 2005
3UTM
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BU of 3utm by Molmil
Crystal structure of a mouse Tankyrase-Axin complex
Descriptor: Axin-1, Tankyrase-1
Authors:Cheng, Z, Morrone, S, Xu, W.
Deposit date:2011-11-26
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a Tankyrase-Axin complex and its implications for Axin turnover and Tankyrase substrate recruitment.
Proc.Natl.Acad.Sci.USA, 109, 2012
3R4F
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BU of 3r4f by Molmil
Prohead RNA
Descriptor: MAGNESIUM ION, pRNA
Authors:Ding, F, Lu, C, Zhano, W, Rajashankar, K.R, Anderson, D.L, Jardine, P.J, Grimes, S, Ke, A.
Deposit date:2011-03-17
Release date:2011-04-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure and assembly of the essential RNA ring component of a viral DNA packaging motor.
Proc.Natl.Acad.Sci.USA, 108, 2011
3UNB
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BU of 3unb by Molmil
Mouse constitutive 20S proteasome in complex with PR-957
Descriptor: 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol, Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, ...
Authors:Huber, E, Basler, M, Schwab, R, Heinemeyer, W, Kirk, C, Groettrup, M, Groll, M.
Deposit date:2011-11-15
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Immuno- and constitutive proteasome crystal structures reveal differences in substrate and inhibitor specificity.
Cell(Cambridge,Mass.), 148, 2012
4AFS
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BU of 4afs by Molmil
Human Chymase - Fynomer Complex
Descriptor: CHYMASE, FYNOMER, GLYCEROL, ...
Authors:Schlatter, D, Brack, S, Banner, D.W, Batey, S, Benz, J, Bertschinger, J, Huber, W, Joseph, C, Rufer, A, Van Der Kloosters, A, Weber, M, Grabulovski, D, Hennig, M.
Deposit date:2012-01-23
Release date:2012-07-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Generation, Characterization and Structural Data of Chymase Binding Proteins Based on the Human Fyn Kinase SH3 Domain.
Mabs, 4, 2012
4AFZ
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BU of 4afz by Molmil
Human Chymase - Fynomer Complex
Descriptor: CHYMASE, D(-)-TARTARIC ACID, FYNOMER
Authors:Schlatter, D, Brack, S, Banner, D.W, Batey, S, Benz, J, Bertschinger, J, Huber, W, Joseph, C, Rufer, A, Van Der Kloosters, A, Weber, M, Grabulovski, D, Hennig, M.
Deposit date:2012-01-23
Release date:2012-07-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Generation, Characterization and Structural Data of Chymase Binding Proteins Based on the Human Fyn Kinase SH3 Domain.
Mabs, 4, 2012
1N14
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BU of 1n14 by Molmil
Structure and Dynamics of Thioguanine-modified Duplex DNA in Comparison with Unmodified DNA; Structure of Unmodified Duplex DNA
Descriptor: 5'-D(*GP*CP*TP*AP*AP*GP*GP*AP*AP*AP*GP*CP*C)-3', 5'-D(*GP*GP*CP*TP*TP*TP*CP*CP*TP*TP*AP*GP*C)-3'
Authors:Somerville, L, Krynetski, E.Y, Krynetskaia, N.F, Beger, R.D, Zhang, W, Marhefka, C.A, Evans, W.E, Kriwacki, R.W.
Deposit date:2002-10-16
Release date:2002-10-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and dynamics of thioguanine-modified duplex DNA
J.Biol.Chem., 278, 2003
4ABZ
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TetR(D) in Complex with Tigecycline and Magnesium, co-crystallized
Descriptor: CHLORIDE ION, MAGNESIUM ION, TIGECYCLINE, ...
Authors:Volkers, G, Hinrichs, W.
Deposit date:2011-12-12
Release date:2012-12-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.886 Å)
Cite:TetR(D) in Complex with Tigecycline and Magnesium
To be Published
6CM2
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BU of 6cm2 by Molmil
SAMHD1 HD domain bound to decitabine triphosphate
Descriptor: 6-amino-3-{2-deoxy-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-3,4-dihydro-1,3,5-triazin-2(1H)-one, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Oellerich, T, Schneider, C, Thomas, D, Knecht, K.M, Buzovetsky, O, Kaderali, L, Schliemann, C, Bohnenberger, H, Angenendt, L, Hartmann, W, Wardelmann, E, Rothenburger, T, Mohr, S, Scheich, S, Comoglio, F, Wilke, A, Strobel, P, Serve, H, Michaelis, M, Ferreiros, N, Geisslinger, G, Xiong, Y, Keppler, O.T, Cinatl, J.
Deposit date:2018-03-02
Release date:2019-06-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Selective inactivation of hypomethylating agents by SAMHD1 provides a rationale for therapeutic stratification in AML.
Nat Commun, 10, 2019
6CMP
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BU of 6cmp by Molmil
Closed structure of inactive SHP2 mutant C459E
Descriptor: Tyrosine-protein phosphatase non-receptor type 11
Authors:Padua, R.A.P, Sun, Y, Marko, I, Pitsawong, W, Kern, D.
Deposit date:2018-03-06
Release date:2018-11-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanism of activating mutations and allosteric drug inhibition of the phosphatase SHP2.
Nat Commun, 9, 2018
4AG7
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BU of 4ag7 by Molmil
C. elegans glucosamine-6-phosphate N-acetyltransferase (GNA1): coenzyme A adduct
Descriptor: COENZYME A, GLUCOSAMINE-6-PHOSPHATE N-ACETYLTRANSFERASE
Authors:Dorfmueller, H.C, Fang, W, Rao, F.V, Blair, D.E, Attrill, H, Shepherd, S.M, van Aalten, D.M.F.
Deposit date:2012-01-24
Release date:2012-07-25
Last modified:2012-08-15
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural and Biochemical Characterization of a Trapped Coenzyme a Adduct of Caenorhabditis Elegans Glucosamine-6-Phosphate N-Acetyltransferase 1.
Acta Crystallogr.,Sect.D, 68, 2012
6CC9
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NMR data-driven model of GTPase KRas-GMPPNP:Cmpd2 complex tethered to a nanodisc
Descriptor: (2R,4S)-4-[(5-bromo-1H-indole-3-carbonyl)amino]-2-[(4-chlorophenyl)methyl]piperidin-1-ium, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, ...
Authors:Fang, Z, Marshall, C.B, Nishikawa, T, Gossert, A.D, Jansen, J.M, Jahnke, W, Ikura, M.
Deposit date:2018-02-06
Release date:2018-09-05
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Inhibition of K-RAS4B by a Unique Mechanism of Action: Stabilizing Membrane-Dependent Occlusion of the Effector-Binding Site.
Cell Chem Biol, 25, 2018
1Y6H
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BU of 1y6h by Molmil
Crystal structure of LIPDF
Descriptor: FORMIC ACID, GLYCINE, Peptide deformylase, ...
Authors:Zhou, Z, Song, X, Li, Y, Gong, W.
Deposit date:2004-12-06
Release date:2004-12-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Unique structural characteristics of peptide deformylase from pathogenic bacterium Leptospira interrogans
J.Mol.Biol., 339, 2004
4AML
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BU of 4aml by Molmil
CRYSTAL STRUCTURE OF WHEAT GERM AGGLUTININ ISOLECTIN 1 IN COMPLEX WITH GLYCOSYLURETHAN
Descriptor: 2-acetamido-2-deoxy-1-O-(propylcarbamoyl)-alpha-D-glucopyranose, AGGLUTININ ISOLECTIN 1, GLYCEROL
Authors:Schwefel, D, Maierhofer, C, Beck, J.G, Seeberger, S, Diederichs, K, Moeller, H.M, Welte, W, Wittmann, V.
Deposit date:2012-03-12
Release date:2012-04-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis of Multivalent Binding to Wheat Germ Agglutinin.
J.Am.Chem.Soc., 132, 2010

223790

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