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PDB: 12512 件

6WVE
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Chicken SPCS1
分子名称: Green fluorescent protein,Chicken Signal Peptidase Complex Subunit 1,Green fluorescent protein
著者Liu, S, Li, W.
登録日2020-05-05
公開日2021-01-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.429 Å)
主引用文献Termini restraining of small membrane proteins enables structure determination at near-atomic resolution.
Sci Adv, 6, 2020
2KIU
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Solution structure and backbone dynamics of the DNA-binding domain of FOXP1: Insight into its domain swapping
分子名称: Forkhead box protein P1
著者Chuang, W, Chu, Y.
登録日2009-05-11
公開日2010-04-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure and backbone dynamics of the DNA-binding domain of FOXP1: Insight into its domain swapping and DNA binding.
Protein Sci., 20, 2011
3D0M
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BU of 3d0m by Molmil
X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex
分子名称: RNA (5'-R(*GP*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3'), SULFATE ION
著者Rypniewski, W, Adamiak, D.A, Milecki, J, Adamiak, R.W.
登録日2008-05-02
公開日2008-09-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Noncanonical G(syn)-G(anti) base pairs stabilized by sulphate anions in two X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex.
Rna, 14, 2008
3D18
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Crystal structure of HLA-B*2709 complexed with a variant of the latent membrane protein 2 peptide (LMP2(L)) of epstein-barr virus
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-2-microglobulin, ...
著者Beltrami, A, Gabdulkhakov, A, Rossmann, M, Ziegler, A, Uchanska-Ziegler, B, Saenger, W.
登録日2008-05-05
公開日2009-05-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal structure of HLA-B*2709 complexed with a variant of the latent membrane protein 2 peptide (LMP2(L)) of epstein-barr virus
To be Published
6WBZ
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Structure of Human HDAC2 in complex with an ethyl ketone inhibitor containing a spiro-bicyclic group
分子名称: (1S)-N-{(1S)-7,7-dihydroxy-1-[5-(2-methoxyquinolin-3-yl)-1H-imidazol-2-yl]nonyl}-6-ethyl-6-azaspiro[2.5]octane-1-carboxamide, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Yu, W.
登録日2020-03-28
公開日2020-05-06
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Discovery of ethyl ketone-based HDACs 1, 2, and 3 selective inhibitors for HIV latency reactivation.
Bioorg.Med.Chem.Lett., 30, 2020
6PWW
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Cryo-EM structure of MLL1 in complex with RbBP5 and WDR5 bound to the nucleosome
分子名称: DNA (146-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Park, S.H, Ayoub, A, Lee, Y.T, Xu, J, Zhang, W, Zhang, B, Zhang, Y, Cianfrocco, M.A, Su, M, Dou, Y, Cho, U.
登録日2019-07-23
公開日2019-12-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.
Nat Commun, 10, 2019
3D3T
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Crystal Structure of HIV-1 CRF01_AE in complex with the substrate p1-p6
分子名称: HIV-1 protease, P1-P6 SUBSTRATE PEPTIDE
著者Bandaranayake, R.M, Prabu-Jeyabalan, M, Kakizawa, J, Sugiura, W, Schiffer, C.A.
登録日2008-05-12
公開日2008-07-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural analysis of human immunodeficiency virus type 1 CRF01_AE protease in complex with the substrate p1-p6.
J.Virol., 82, 2008
6WVF
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E.coli DsbB C104S with ubiquinone
分子名称: Green fluorescent protein,Disulfide bond formation protein B,Green fluorescent protein, UBIQUINONE-1
著者Liu, S, Li, W.
登録日2020-05-05
公開日2021-01-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Termini restraining of small membrane proteins enables structure determination at near-atomic resolution.
Sci Adv, 6, 2020
3D4B
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Crystal structure of Sir2Tm in complex with Acetyl p53 peptide and DADMe-NAD+
分子名称: 5'-O-[(R)-{[(R)-{[(3R,4R)-1-(3-carbamoylbenzyl)-4-hydroxypyrrolidin-3-yl]methoxy}(hydroxy)phosphoryl]methyl}(hydroxy)phosphoryl]adenosine, Acetyl P53 peptide, NAD-dependent deacetylase, ...
著者Hawse, W.F, Hoff, K.G, Fatkins, D, Daines, A, Zubkova, O.V, Schramm, V.L, Zheng, W, Wolberger, C.
登録日2008-05-14
公開日2008-09-30
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural insights into intermediate steps in the Sir2 deacetylation reaction.
Structure, 16, 2008
3CEZ
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Crystal structure of methionine-R-sulfoxide reductase from Burkholderia pseudomallei
分子名称: ACETIC ACID, Methionine-R-sulfoxide reductase, ZINC ION
著者Staker, B, Napuli, A, Nakazawa, S.H, Castaneda, L, Alkafeef, S, Vanvoorhis, W, Stewart, L, Myler, P, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2008-02-29
公開日2008-03-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Methionine-R-sulfoxide reductase from Burkholderia pseudomallei.
To be Published
6WVI
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VKOR-like from Takifugu rubripes
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Vitamin K epoxide reductase-like protein, termini restrained by green fluorescent protein
著者Liu, S, Sukumar, N, Li, W.
登録日2020-05-06
公開日2020-11-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of antagonizing the vitamin K catalytic cycle for anticoagulation.
Science, 371, 2021
8OTV
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BU of 8otv by Molmil
Crystal structure of NUDT14 complexed with novel compound
分子名称: 1-(1-methylpiperidin-4-yl)-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-4-amine, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
著者Balikci, E, Feyerherm, C, Bradshaw, W, Seupel, R, Brennan, P.E, Bountra, C, von Delft, F, Huber, K, Structural Genomics Consortium (SGC)
登録日2023-04-21
公開日2024-05-01
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Unexpected Noncovalent Off-Target Activity of Clinical BTK Inhibitors Leads to Discovery of a Dual NUDT5/14 Antagonist.
J.Med.Chem., 67, 2024
3CWC
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BU of 3cwc by Molmil
Crystal structure of putative glycerate kinase 2 from Salmonella typhimurium LT2
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Putative glycerate kinase 2
著者Osipiuk, J, Zhou, M, Holzle, D, Anderson, W, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2008-04-21
公開日2008-07-08
最終更新日2014-04-02
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献X-ray crystal structure of putative glycerate kinase 2 from Salmonella typhimurium LT2.
To be Published
2K6P
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Solution Structure of hypothetical protein, HP1423
分子名称: Uncharacterized protein HP_1423
著者Kim, J, Park, S, Lee, K, Son, W, Sohn, N, Lee, B.
登録日2008-07-15
公開日2009-06-16
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of hypothetical protein HP1423 (Y1423_HELPY) reveals the presence of alphaL motif related to RNA binding
Proteins, 75, 2009
6WXY
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crystal structure of cA6-bound Card1
分子名称: Card1, cA6
著者Rostol, J, Xie, W, Patel, D.J, Marraffini, L.
登録日2020-05-12
公開日2020-12-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Card1 nuclease provides defence during type III CRISPR immunity.
Nature, 590, 2021
4A7J
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BU of 4a7j by Molmil
Symmetric Dimethylation of H3 Arginine 2 is a Novel Histone Mark that Supports Euchromatin Maintenance
分子名称: HISTONE H3.1T, WD REPEAT-CONTAINING PROTEIN 5
著者Migliori, V, Muller, J, Phalke, S, Low, D, Bezzi, M, ChuenMok, W, Gunaratne, J, Capasso, P, Bassi, C, Cecatiello, V, DeMarco, A, Blackstock, W, Kuznetsov, V, Amati, B, Mapelli, M, Guccione, E.
登録日2011-11-14
公開日2012-01-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Symmetric Dimethylation of H3R2 is a Newly Identified Histone Mark that Supports Euchromatin Maintenance
Nat.Struct.Mol.Biol., 19, 2012
6WQE
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Solution Structure of the IWP-051-bound H-NOX from Shewanella woodyi in the Fe(II)CO ligation state
分子名称: 5-fluoro-2-{1-[(2-fluorophenyl)methyl]-5-(1,2-oxazol-3-yl)-1H-pyrazol-3-yl}pyrimidin-4-ol, CARBON MONOXIDE, Heme NO binding domain protein, ...
著者Chen, C.Y, Lee, W, Montfort, W.R.
登録日2020-04-28
公開日2020-07-22
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structures of the Shewanella woodyi H-NOX protein in the presence and absence of soluble guanylyl cyclase stimulator IWP-051.
Protein Sci., 30, 2021
3CNV
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Crystal structure of the ligand-binding domain of a putative GntR-family transcriptional regulator from Bordetella bronchiseptica
分子名称: CHLORIDE ION, CITRATE ANION, Putative GntR-family transcriptional regulator
著者Zimmerman, M.D, Xu, X, Cui, H, Filippova, E.V, Savchenko, A, Edwards, A.M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2008-03-26
公開日2008-04-29
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the ligand-binding domain of a putative GntR-family transcriptional regulator from Bordetella bronchiseptica.
To be Published
2KG6
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Solution Structure of the acetyl Actinorhodin Acyl Carrier Protein from Streptomyces coelicolor
分子名称: Actinorhodin polyketide synthase acyl carrier protein, THIOACETIC ACID S-{2-[3-(2-HYDROXY-3,3-DIMETHYL-4-PHOSPHONOOXY-BUTYRYLAMINO)-PROPIONYLAMINO]-ETHYL} ESTER
著者Crump, M.P, Evans, S.E, Eliza, P, Christopher, W.
登録日2009-03-06
公開日2009-04-14
最終更新日2021-10-20
実験手法SOLUTION NMR
主引用文献Probing the Interactions of Early Polyketide Intermediates with the Actinorhodin ACP from S. coelicolor A3(2).
J.Mol.Biol., 389, 2009
6WQZ
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Structure of human ATG9A, the only transmembrane protein of the core autophagy machinery
分子名称: Autophagy-related protein 9A, Lauryl Maltose Neopentyl Glycol
著者Guardia, C.M, Tan, X, Lian, T, Rana, M.S, Zhou, W, Christenson, E.T, Lowry, A.J, Faraldo-Gomez, J.D, Bonifacino, J.S, Jiang, J, Banerjee, A.
登録日2020-04-29
公開日2020-07-08
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure of Human ATG9A, the Only Transmembrane Protein of the Core Autophagy Machinery.
Cell Rep, 31, 2020
3LO2
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BU of 3lo2 by Molmil
Crystal structure of human alpha-defensin 1 (Y21A mutant)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Neutrophil defensin 1, SULFATE ION, ...
著者Pazgier, M, Lu, W.
登録日2010-02-03
公開日2010-03-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Trp-26 imparts functional versatility to human alpha-defensin HNP1.
J.Biol.Chem., 285, 2010
3D26
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Norwalk P domain A-trisaccharide complex
分子名称: 58 kd capsid protein, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)]beta-D-galactopyranose
著者Hegde, R, Bu, W.
登録日2008-05-07
公開日2008-06-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for the receptor binding specificity of Norwalk virus.
J.Virol., 82, 2008
6WV7
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BU of 6wv7 by Molmil
Human VKOR with Chlorophacinone
分子名称: Chlorophacinone, Vitamin K epoxide reductase, termini restrained by green fluorescent protein
著者Liu, S, Sukumar, N, Li, W.
登録日2020-05-05
公開日2020-11-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.483 Å)
主引用文献Structural basis of antagonizing the vitamin K catalytic cycle for anticoagulation.
Science, 371, 2021
6WXW
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crystal structure of apo Card1
分子名称: Card1
著者Rostol, J, Xie, W, Patel, D.J, Marraffini, L.
登録日2020-05-12
公開日2020-12-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献The Card1 nuclease provides defence during type III CRISPR immunity.
Nature, 590, 2021
3LXF
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BU of 3lxf by Molmil
Crystal Structure of [2Fe-2S] Ferredoxin Arx from Novosphingobium aromaticivorans
分子名称: FE2/S2 (INORGANIC) CLUSTER, Ferredoxin
著者Yang, W, Bell, S.G, Wang, H, Bartlam, M, Wong, L.L, Rao, Z.
登録日2010-02-25
公開日2010-06-23
最終更新日2014-02-12
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular characterization of a class I P450 electron transfer system from Novosphingobium aromaticivorans DSM12444
J.Biol.Chem., 285, 2010

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件を2024-08-07に公開中

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