Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12479 件

5MZZ
DownloadVisualize
BU of 5mzz by Molmil
Crystal structure of the decarboxylase AibA/AibB in complex with 3-methylglutaconate
分子名称: 3-methylpent-2-enedioic acid, ACETATE ION, GLYCEROL, ...
著者Bock, T, Luxenburger, E, Hoffmann, J, Schuetza, V, Feiler, C, Mueller, R, Blankenfeldt, W.
登録日2017-02-02
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献AibA/AibB Induces an Intramolecular Decarboxylation in Isovalerate Biosynthesis by Myxococcus xanthus.
Angew. Chem. Int. Ed. Engl., 56, 2017
5SVJ
DownloadVisualize
BU of 5svj by Molmil
Crystal structure of the ATP-gated human P2X3 ion channel in the closed, apo state
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, ...
著者Mansoor, S.E, Lu, W, Oosterheert, W, Shekhar, M, Tajkhorshid, E, Gouaux, E.
登録日2016-08-06
公開日2016-09-28
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.984 Å)
主引用文献X-ray structures define human P2X3 receptor gating cycle and antagonist action.
Nature, 538, 2016
6CIL
DownloadVisualize
BU of 6cil by Molmil
PRE-REACTION COMPLEX, RAG1(E962Q)/2-INTACT/INTACT 12/23RSS COMPLEX IN MN2+
分子名称: High mobility group protein B1, Intact 12RSS substrate forward strand, Intact 12RSS substrate reverse strand, ...
著者Chuenchor, W, Chen, X, Kim, M.S, Gellert, M, Yang, W.
登録日2018-02-24
公開日2018-04-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (4.15 Å)
主引用文献Cracking the DNA Code for V(D)J Recombination.
Mol. Cell, 70, 2018
5NCI
DownloadVisualize
BU of 5nci by Molmil
GriE in complex with cobalt, alpha-ketoglutarate and l-leucine
分子名称: 2-OXOGLUTARIC ACID, COBALT (II) ION, LEUCINE, ...
著者Lukat, P, Blankenfeldt, W, Mueller, R.
登録日2017-03-05
公開日2017-10-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.755 Å)
主引用文献Biosynthesis of methyl-proline containing griselimycins, natural products with anti-tuberculosis activity.
Chem Sci, 8, 2017
2Q58
DownloadVisualize
BU of 2q58 by Molmil
Cryptosporidium parvum putative polyprenyl pyrophosphate synthase (cgd4_2550) in complex with zoledronate
分子名称: Farnesyl pyrophosphate synthase, MAGNESIUM ION, ZOLEDRONIC ACID
著者Chruszcz, M, Artz, J, Zheng, H, Dong, A, Dunford, J, Lew, J, Zhao, Y, Kozieradski, I, Kavanaugh, K.L, Opperman, U, Sundstrom, M, Weigelt, J, Edwards, A, Arrowsmith, C, Bochkarev, A, Hui, R, Minor, W, Structural Genomics Consortium (SGC)
登録日2007-05-31
公開日2007-06-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Targeting a uniquely nonspecific prenyl synthase with bisphosphonates to combat cryptosporidiosis
Chem.Biol., 15, 2008
1OF2
DownloadVisualize
BU of 1of2 by Molmil
Crystal structure of HLA-B*2709 complexed with the vasoactive intestinal peptide type 1 receptor (VIPR) peptide (residues 400-408)
分子名称: BETA-2-MICROGLOBULIN, GLYCEROL, HUMAN LYMPHOCYTE ANTIGEN HLA-B27, ...
著者Hulsmeyer, M, Fiorillo, M.T, Bettosini, F, Sorrentino, R, Saenger, W, Ziegler, A, Uchanska-Ziegler, B.
登録日2003-04-04
公開日2004-01-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Dual, Hla-B27 Subtype-Dependent Conformation of a Self-Peptide
J.Exp.Med., 199, 2004
5MBR
DownloadVisualize
BU of 5mbr by Molmil
Quadruplex with flipped tetrad formed by a human telomeric sequence
分子名称: G-quadruplex formed by a human telomeric sequence modified with 2'-fluoro-2'-deoxyriboguanosine
著者Dickerhoff, J, Haase, L, Langel, W, Weisz, K.
登録日2016-11-08
公開日2017-04-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Tracing Effects of Fluorine Substitutions on G-Quadruplex Conformational Changes.
ACS Chem. Biol., 12, 2017
5MCR
DownloadVisualize
BU of 5mcr by Molmil
Quadruplex with flipped tetrad formed by an artificial sequence
分子名称: Artificial quadruplex with propeller, diagonal and lateral loop
著者Dickerhoff, J, Haase, L, Langel, W, Weisz, K.
登録日2016-11-10
公開日2017-04-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Tracing Effects of Fluorine Substitutions on G-Quadruplex Conformational Changes.
ACS Chem. Biol., 12, 2017
2W3T
DownloadVisualize
BU of 2w3t by Molmil
Chloro complex of the Ni-Form of E.coli deformylase
分子名称: CHLORIDE ION, ETHANOL, NICKEL (II) ION, ...
著者Ngo, Y.H.T, Palm, G.J, Hinrichs, W.
登録日2008-11-14
公開日2009-12-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Structure of the Ni(II) Complex of Escherichia Coli Peptide Deformylase and Suggestions on Deformylase Activities Depending on Different Metal(II) Centres.
J.Biol.Inorg.Chem., 15, 2010
5MPE
DownloadVisualize
BU of 5mpe by Molmil
26S proteasome in presence of ATP (s2)
分子名称: 26S proteasome complex subunit SEM1, 26S proteasome regulatory subunit RPN1, 26S proteasome regulatory subunit RPN10, ...
著者Wehmer, M, Rudack, T, Beck, F, Aufderheide, A, Pfeifer, G, Plitzko, J.M, Foerster, F, Schulten, K, Baumeister, W, Sakata, E.
登録日2016-12-16
公開日2017-03-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural insights into the functional cycle of the ATPase module of the 26S proteasome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4P2K
DownloadVisualize
BU of 4p2k by Molmil
Structure of Ephrin type-A receptor 2
分子名称: Ephrin type-A receptor 2
著者Jimin, Z, Qiang, W, Nan, W.
登録日2014-03-04
公開日2014-05-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.499 Å)
主引用文献Structure of Ephrin type-A receptor 2
To Be Published
3P7M
DownloadVisualize
BU of 3p7m by Molmil
Structure of putative lactate dehydrogenase from Francisella tularensis subsp. tularensis SCHU S4
分子名称: Malate dehydrogenase, PHOSPHATE ION
著者Osinski, T, Cymborowski, M, Zimmerman, M.D, Gordon, E, Grimshaw, S, Skarina, T, Chruszcz, M, Savchenko, A, Anderson, W, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2010-10-12
公開日2010-10-20
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of putative lactate dehydrogenase from Francisella tularensis subsp. tularensis SCHU S4
To be Published
6CIJ
DownloadVisualize
BU of 6cij by Molmil
Cryo-EM structure of mouse RAG1/2 HFC complex containing partial HMGB1 linker(3.9 A)
分子名称: CALCIUM ION, DNA (30-MER), DNA (41-MER), ...
著者Chen, X, Kim, M, Chuenchor, W, Cui, Y, Zhang, X, Zhou, Z.H, Gellert, M, Yang, W.
登録日2018-02-24
公開日2018-04-25
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cracking the DNA Code for V(D)J Recombination.
Mol. Cell, 70, 2018
5N01
DownloadVisualize
BU of 5n01 by Molmil
Crystal structure of the decarboxylase AibA/AibB C56N variant
分子名称: ACETATE ION, GLYCEROL, Glutaconate CoA-transferase family, ...
著者Bock, T, Luxenburger, E, Hoffmann, J, Schuetza, V, Feiler, C, Mueller, R, Blankenfeldt, W.
登録日2017-02-02
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献AibA/AibB Induces an Intramolecular Decarboxylation in Isovalerate Biosynthesis by Myxococcus xanthus.
Angew. Chem. Int. Ed. Engl., 56, 2017
5NBK
DownloadVisualize
BU of 5nbk by Molmil
NDM-1 metallo-beta-lactamase: a parsimonious interpretation of the diffraction data
分子名称: CHLORIDE ION, HEXAETHYLENE GLYCOL, Metallo-beta-lactamase type 2, ...
著者Raczynska, J.E, Shabalin, I.G, Jaskolski, M, Minor, W, Wlodawer, A.
登録日2017-03-02
公開日2018-10-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A close look onto structural models and primary ligands of metallo-beta-lactamases.
Drug Resist. Updat., 40, 2018
5NCJ
DownloadVisualize
BU of 5ncj by Molmil
GriE in complex with manganese, succinate and (2S,4R)-5-hydroxyleucine
分子名称: (2S,4R)-5-hydroxyleucine, Leucine hydroxylase, MANGANESE (II) ION, ...
著者Lukat, P, Blankenfeldt, W, Mueller, R.
登録日2017-03-05
公開日2017-10-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.529 Å)
主引用文献Biosynthesis of methyl-proline containing griselimycins, natural products with anti-tuberculosis activity.
Chem Sci, 8, 2017
5N0I
DownloadVisualize
BU of 5n0i by Molmil
Crystal structure of NDM-1 in complex with beta-mercaptoethanol - new refinement
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, GLYCEROL, ...
著者Raczynska, J.E, Shabalin, I.G, Jaskolski, M, Minor, W, Wlodawer, A, King, D.T, Strynadka, N.C.J.
登録日2017-02-03
公開日2017-04-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献A close look onto structural models and primary ligands of metallo-beta-lactamases.
Drug Resist. Updat., 40, 2018
1QR5
DownloadVisualize
BU of 1qr5 by Molmil
SOLUTION STRUCTURE OF HISTIDINE CONTAINING PROTEIN (HPR) FROM STAPHYLOCOCCUS CARNOSUS
分子名称: PHOSPHOCARRIER PROTEIN HPR
著者Kalbitzer, H.R, Gorler, A, Li, H, Dubovskii, P.V, Hengstenberg, W, Kowolik, C, Yamada, H, Akasaka, K.
登録日1999-05-19
公開日2000-06-21
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献15N and 1H NMR study of histidine containing protein (HPr) from Staphylococcus carnosus at high pressure.
Protein Sci., 9, 2000
5SVR
DownloadVisualize
BU of 5svr by Molmil
Crystal structure of the ATP-gated human P2X3 ion channel bound to competitive antagonist A-317491
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-{[(3-phenoxyphenyl)methyl][(1S)-1,2,3,4-tetrahydronaphthalen-1-yl]carbamoyl}benzene-1,2,4-tricarboxylic acid, MAGNESIUM ION, ...
著者Mansoor, S.E, Lu, W, Oosterheert, W, Shekhar, M, Tajkhorshid, E, Gouaux, E.
登録日2016-08-07
公開日2016-10-05
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.13 Å)
主引用文献X-ray structures define human P2X3 receptor gating cycle and antagonist action.
Nature, 538, 2016
5N5D
DownloadVisualize
BU of 5n5d by Molmil
Crystal Structure of the O-Methyltransferase TomG from Streptomyces achromogenes involved in Tomaymycin synthesis in complex with SAM
分子名称: (R,R)-2,3-BUTANEDIOL, GLYCEROL, Methyltransferase, ...
著者Pippel, J, Blankenfeldt, W.
登録日2017-02-13
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Total Biosynthesis of the Pyrrolo[4,2]benzodiazepine Scaffold Tomaymycin on an In Vitro Reconstituted NRPS System.
Cell Chem Biol, 24, 2017
1GK1
DownloadVisualize
BU of 1gk1 by Molmil
Structure-based prediction of modifications in glutarylamidase to allow single-step enzymatic production of 7-aminocephalosporanic acid from cephalosporin C
分子名称: CEPHALOSPORIN ACYLASE, GLYCEROL
著者Fritz-Wolf, K, Koller, K.P, Lange, G, Liesum, A, Sauber, K, Schreuder, H, Aretz, W, Kabsch, W.
登録日2001-08-07
公開日2002-01-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure-Based Prediction of Modifications in Glutarylamidase to Allow Single-Step Enzymatic Production of 7-Aminocephalosporanic Acid from Cephalosporin C.
Protein Sci., 11, 2002
5MZX
DownloadVisualize
BU of 5mzx by Molmil
Crystal structure of the decarboxylase AibA/AibB in complex with 4'-diphospho pantetheine
分子名称: 4'-diphospho pantetheine, ACETATE ION, GLYCEROL, ...
著者Bock, T, Luxenburger, E, Hoffmann, J, Schuetza, V, Feiler, C, Mueller, R, Blankenfeldt, W.
登録日2017-02-02
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献AibA/AibB Induces an Intramolecular Decarboxylation in Isovalerate Biosynthesis by Myxococcus xanthus.
Angew. Chem. Int. Ed. Engl., 56, 2017
5N7C
DownloadVisualize
BU of 5n7c by Molmil
Human TTR altered conformation from soaking in CuCl2.
分子名称: 1,2-ETHANEDIOL, ACETATE ION, COPPER (II) ION, ...
著者Ciccone, L, Savko, M, Shepard, W, Stura, E.A.
登録日2017-02-20
公開日2018-03-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Copper mediated amyloid-beta binding to Transthyretin.
Sci Rep, 8, 2018
5N62
DownloadVisualize
BU of 5n62 by Molmil
Human TTR crystals soaked in manganese chloride.
分子名称: MANGANESE (II) ION, Transthyretin
著者Ciccone, L, Savko, M, Shepard, W, Stura, E.A.
登録日2017-02-14
公開日2018-03-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Copper mediated amyloid-beta binding to Transthyretin.
Sci Rep, 8, 2018
5N88
DownloadVisualize
BU of 5n88 by Molmil
Crystal structure of antibody bound to viral protein
分子名称: PC4 and SFRS1-interacting protein, VH59 antibody
著者Bao, L, Hannon, C, Cruz-Migoni, A, Ptchelkine, D, Sun, M.-y, Derveni, M, Bunjobpol, W, Chambers, J.S, Simmons, A, Phillips, S.E.V, Rabbitts, T.H.
登録日2017-02-23
公開日2017-12-20
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Intracellular immunization against HIV infection with an intracellular antibody that mimics HIV integrase binding to the cellular LEDGF protein.
Sci Rep, 7, 2017

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon