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PDB: 1918 件

8D3C
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VWF tubule derived from monomeric D1-A1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, von Willebrand factor
著者Anderson, J.R, Li, J, Springer, T.A, Brown, A.
登録日2022-06-01
公開日2022-07-06
最終更新日2022-10-05
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structures of VWF tubules before and after concatemerization reveal a mechanism of disulfide bond exchange.
Blood, 140, 2022
8D3D
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VWF tubule derived from dimeric D1-A1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, von Willebrand factor
著者Anderson, J.R, Li, J, Springer, T.A, Brown, A.
登録日2022-06-01
公開日2022-07-06
最終更新日2022-10-05
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structures of VWF tubules before and after concatemerization reveal a mechanism of disulfide bond exchange.
Blood, 140, 2022
7UQ2
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Vs.4 from T4 phage in complex with cGAMP
分子名称: 2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one, CALCIUM ION, Vs.4
著者Jenson, J.M, Chen, Z.J.
登録日2022-04-18
公開日2023-02-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Ubiquitin-like conjugation by bacterial cGAS enhances anti-phage defence.
Nature, 616, 2023
5EXH
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Crystal structure of mTET3-CXXC domain in complex with 5-carboxylcytosine DNA at 1.3 Angstroms resolution.
分子名称: DNA (5'-D(*GP*AP*AP*TP*CP*(1CC)P*GP*GP*AP*TP*TP*C)-3'), Methylcytosine dioxygenase TET3, ZINC ION
著者Song, J.
登録日2015-11-23
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Tet3 Reads 5-Carboxylcytosine through Its CXXC Domain and Is a Potential Guardian against Neurodegeneration.
Cell Rep, 14, 2016
6W4W
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Crystal Structure of the Fab fragment of humanized 5c8 antibody
分子名称: 5c8 Fab heavy chain, 5c8 Fab light chain
著者Henderson, J.N, Mills, J.H, Simmons, C.R.
登録日2020-03-11
公開日2020-12-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structural Insights into How Protein Environments Tune the Spectroscopic Properties of a Noncanonical Amino Acid Fluorophore.
Biochemistry, 59, 2020
6W9G
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Crystal Structure of the Fab fragment of humanized 5c8 antibody containing the fluorescent non-canonical amino acid L-(7-hydroxycoumarin-4-yl)ethylglycine in complex with CD40L at pH 6.8
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 5c8* Fab (heavy chain), ...
著者Henderson, J.N, Simmons, C.R, Mills, J.H.
登録日2020-03-23
公開日2020-12-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structural Insights into How Protein Environments Tune the Spectroscopic Properties of a Noncanonical Amino Acid Fluorophore.
Biochemistry, 59, 2020
6W5A
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Crystal Structure of the Fab fragment of humanized 5c8 antibody containing the fluorescent non-canonical amino acid L-(7-hydroxycoumarin-4-yl)ethylglycine at pH 9.7
分子名称: Antibody 5c8* Fab Heavy Chain, Antibody 5c8* Fab Light Chain
著者Henderson, J.N, Simmons, C.R, Mills, J.H.
登録日2020-03-12
公開日2020-12-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Insights into How Protein Environments Tune the Spectroscopic Properties of a Noncanonical Amino Acid Fluorophore.
Biochemistry, 59, 2020
7URX
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SJ25C1 Fab in complex with soluble CD19
分子名称: B-lymphocyte antigen CD19, SJ25C1 Fab heavy chain, SJ25C1 Fab light chain
著者Meyerson, J, He, C.
登録日2022-04-22
公開日2023-02-15
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献CD19 CAR antigen engagement mechanisms and affinity tuning.
Sci Immunol, 8, 2023
7URV
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FMC63 scFv in complex with soluble CD19
分子名称: B-lymphocyte antigen CD19, FMC63 single-chain variable fragment
著者Meyerson, J, He, C.
登録日2022-04-22
公開日2023-02-15
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献CD19 CAR antigen engagement mechanisms and affinity tuning.
Sci Immunol, 8, 2023
3LOB
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BU of 3lob by Molmil
Crystal Structure of Flock House Virus calcium mutant
分子名称: Coat protein beta, Coat protein gamma, RNA (5'-R(*UP*UP*U*AP*UP*CP*UP*(P))-3'), ...
著者Johnson, J.E, Banerjee, M, Speir, J.A, Huang, R.
登録日2010-02-03
公開日2010-04-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structure and function of a genetically engineered mimic of a nonenveloped virus entry intermediate.
J.Virol., 84, 2010
6TZK
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Bacterial cellulose synthase outermembrane channel BcsC with terminal TPR repeat
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ...
著者Acheson, J.F, Derewenda, Z, Zimmer, J.
登録日2019-08-12
公開日2019-10-23
最終更新日2023-02-15
実験手法X-RAY DIFFRACTION (1.852 Å)
主引用文献Architecture of the Cellulose Synthase Outer Membrane Channel and Its Association with the Periplasmic TPR Domain.
Structure, 27, 2019
8T5X
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Probing the dissociation pathway of a kinetically labile transthyretin mutant (A25T)
分子名称: Transthyretin
著者Ferguson, J.A, Sun, X, Leach, B.I, Stanfield, R.L, Dyson, H.J, Wright, P.E.
登録日2023-06-14
公開日2023-08-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Probing the Dissociation Pathway of a Kinetically Labile Transthyretin Mutant.
J.Am.Chem.Soc., 146, 2024
6WGX
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Cocrystal of BRD4(D1) with a selective inhibitor
分子名称: 1,2-ETHANEDIOL, 4-(1-{1-[2-(dimethylamino)ethyl]piperidin-4-yl}-4-[4-(trifluoromethyl)phenyl]-1H-imidazol-5-yl)-N-(3,5-dimethylphenyl)pyrimidin-2-amine, Bromodomain-containing protein 4
著者Johnson, J.A, Cui, H, Shi, K, Aihara, H, Pomerantz, W.C.K.
登録日2020-04-06
公開日2020-10-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Selective N-Terminal BET Bromodomain Inhibitors by Targeting Non-Conserved Residues and Structured Water Displacement*.
Angew.Chem.Int.Ed.Engl., 60, 2021
8AF2
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BU of 8af2 by Molmil
Human Sterol Carrier Protein with unnatural amino acid 2,2'-bipyridine alanine incorporated at position 111
分子名称: COPPER (II) ION, Enoyl-CoA hydratase 2, FRAGMENT OF TRITON X-100, ...
著者Richardson, J.M, Klemencic, E, Jarvis, A.G.
登録日2022-07-15
公開日2023-08-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Using BpyAla to generate copper artificial metalloenzymes: a catalytic and structural study.
Catalysis Science And Technology, 14, 2024
5HDA
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BU of 5hda by Molmil
Crystal Structure of the BS69 coiled coil-MYND domains bound to an EBNA2 PXLXP motif
分子名称: Epstein-Barr nuclear antigen 2, ZINC ION, Zinc finger MYND domain-containing protein 11
著者Song, J, Harter, M.
登録日2016-01-05
公開日2016-01-20
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.3899 Å)
主引用文献BS69/ZMYND11 C-Terminal Domains Bind and Inhibit EBNA2.
Plos Pathog., 12, 2016
5FRG
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BU of 5frg by Molmil
The NMR Structure of the Cdc42-interacting region of TOCA1
分子名称: FORMIN-BINDING PROTEIN 1-LIKE
著者Watson, J.R, Nietlispach, D, Owen, D, Mott, H.R.
登録日2015-12-17
公開日2016-05-04
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Investigation of the Interaction between Cdc42 and its Effector Toca1: Handover of Cdc42 to the Actin Regulator N-Wasp is Facilitated by Differential Binding Affinities.
J.Biol.Chem., 291, 2016
6MBD
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Human Mcl-1 in complex with the designed peptide dM1
分子名称: Induced myeloid leukemia cell differentiation protein Mcl-1, ZINC ION, dM1
著者Jenson, J.M, Keating, A.E.
登録日2018-08-29
公開日2019-03-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Tertiary Structural Motif Sequence Statistics Enable Facile Prediction and Design of Peptides that Bind Anti-apoptotic Bfl-1 and Mcl-1.
Structure, 27, 2019
8GET
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BU of 8get by Molmil
R. hominis 2 beta-glucuronidase bound to norquetiapine-glucuronide
分子名称: 11-(4-beta-D-glucopyranuronosylpiperazin-1-yl)dibenzo[b,f][1,4]thiazepine, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
著者Simpson, J.B, Redinbo, M.R.
登録日2023-03-07
公開日2024-03-20
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Gut microbial beta-glucuronidases influence endobiotic homeostasis and are modulated by diverse therapeutics.
Cell Host Microbe, 32, 2024
6MBE
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BU of 6mbe by Molmil
Human Mcl-1 in complex with the designed peptide dM7
分子名称: CHLORIDE ION, Induced myeloid leukemia cell differentiation protein Mcl-1, dM7
著者Jenson, J.M, Keating, A.E.
登録日2018-08-29
公開日2019-03-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Tertiary Structural Motif Sequence Statistics Enable Facile Prediction and Design of Peptides that Bind Anti-apoptotic Bfl-1 and Mcl-1.
Structure, 27, 2019
6MBC
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Human Bfl-1 in complex with the designed peptide dF4
分子名称: Bcl-2-related protein A1, dF4
著者Jenson, J.M, Keating, A.E.
登録日2018-08-29
公開日2019-03-06
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (1.752 Å)
主引用文献Tertiary Structural Motif Sequence Statistics Enable Facile Prediction and Design of Peptides that Bind Anti-apoptotic Bfl-1 and Mcl-1.
Structure, 27, 2019
8GEO
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BU of 8geo by Molmil
E. eligens beta-glucuronidase bound to 3-OH-desloratidine-glucuronide
分子名称: 8-chloro-11-(1-beta-D-glucopyranuronosylpiperidin-4-ylidene)-3-hydroxy-6,11-dihydro-5H-benzo[5,6]cyclohepta[1,2-b]pyridine, Beta-glucuronidase, GLYCEROL
著者Simpson, J.B, Redinbo, M.R.
登録日2023-03-07
公開日2024-03-20
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Gut microbial beta-glucuronidases influence endobiotic homeostasis and are modulated by diverse therapeutics.
Cell Host Microbe, 32, 2024
8GER
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E. eligens beta-glucuronidase bound to norquetiapine-glucuronide
分子名称: 11-(4-beta-D-glucopyranuronosylpiperazin-1-yl)dibenzo[b,f][1,4]thiazepine, Beta-glucuronidase
著者Simpson, J.B, Lietzan, A.D, Redinbo, M.R.
登録日2023-03-07
公開日2024-03-20
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Gut microbial beta-glucuronidases influence endobiotic homeostasis and are modulated by diverse therapeutics.
Cell Host Microbe, 32, 2024
6MBB
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BU of 6mbb by Molmil
Human Bfl-1 in complex with the designed peptide dF1
分子名称: Bcl-2-related protein A1, dF1
著者Jenson, J.M, Keating, A.E.
登録日2018-08-29
公開日2019-03-06
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Tertiary Structural Motif Sequence Statistics Enable Facile Prediction and Design of Peptides that Bind Anti-apoptotic Bfl-1 and Mcl-1.
Structure, 27, 2019
4BIQ
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BU of 4biq by Molmil
Homology model of coxsackievirus A7 (CAV7) empty capsid proteins.
分子名称: VP1, VP2, VP3
著者Seitsonen, J.J.T, Shakeel, S, Susi, P, Pandurangan, A.P, Sinkovits, R.S, Hyvonen, H, Laurinmaki, P, Yla-Pelto, J, Topf, M, Hyypia, T, Butcher, S.J.
登録日2013-04-12
公開日2013-10-02
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (6.09 Å)
主引用文献Combined Approaches to Flexible Fitting and Assessment in Virus Capsids Undergoing Conformational Change.
J.Struct.Biol., 185, 2014
3C99
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Structural Basis of Histone H4 Recognition by p55
分子名称: CADMIUM ION, Chromatin assembly factor 1 p55 subunit
著者Song, J.J, Garlick, J.D, Kingston, R.E.
登録日2008-02-15
公開日2008-05-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of histone H4 recognition by p55.
Genes Dev., 22, 2008

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件を2024-07-03に公開中

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