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PDB: 787 results

3CWO
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A beta/alpha-barrel built by the combination of fragments from different folds
Descriptor: SULFATE ION, beta/alpha-barrel protein based on 1THF and 1TMY
Authors:Bharat, T.A.M, Eisenbeis, S, Zeth, K, Hocker, B.
Deposit date:2008-04-22
Release date:2008-07-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A beta alpha-barrel built by the combination of fragments from different folds.
Proc.Natl.Acad.Sci.Usa, 105, 2008
5NV6
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Structure of human transforming growth factor beta-induced protein (TGFBIp).
Descriptor: ACETATE ION, Transforming growth factor-beta-induced protein ig-h3
Authors:Garcia-Castellanos, R, Nielsen, S.N, Runager, K, Thogersen, B.I, Goulas, T, Enghild, J.J, Gomis-Ruth, F.X.
Deposit date:2017-05-03
Release date:2017-08-09
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Structural and Functional Implications of Human Transforming Growth Factor beta-Induced Protein, TGFBIp, in Corneal Dystrophies.
Structure, 25, 2017
3DJ5
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Crystal structure of the mouse Aurora-A catalytic domain (Asn186->Gly, Lys240->Arg, Met302->Leu) in complex with Compound 290.
Descriptor: 3-({3-[(6-amino-5-bromopyrimidin-4-yl)sulfanyl]propanoyl}amino)-4-methoxy-N-phenylbenzamide, serine/threonine kinase 6
Authors:Elling, R.A, Erlanson, D.A, Yang, W, Tangonan, B.T, Hansen, S.K, Romanowski, M.J.
Deposit date:2008-06-22
Release date:2009-05-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:New fragment-based drug discovery
To be Published
3DJ6
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Crystal structure of the mouse Aurora-A catalytic domain (Asn186->Gly, Lys240->Arg, Met302->Leu) in complex with Compound 823.
Descriptor: 4-methoxy-N-phenyl-3-({3-[(1H-pyrrolo[2,3-b]pyridin-5-ylmethyl)sulfanyl]propanoyl}amino)benzamide, serine/threonine kinase 6
Authors:Elling, R.A, Erlanson, D.A, Yang, W, Tangonan, B.T, Hansen, S.K, Romanowski, M.J.
Deposit date:2008-06-22
Release date:2009-05-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:New fragment-based drug discovery
To be Published
2XDH
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Non-cellulosomal cohesin from the hyperthermophilic archaeon Archaeoglobus fulgidus
Descriptor: CHLORIDE ION, COHESIN, MAGNESIUM ION, ...
Authors:Voronov-Goldman, M, Lamed, R, Noach, I, Borovok, I, Kwiat, M, Rosenheck, S, Shimon, L.J.W, Bayer, E.A, Frolow, F.
Deposit date:2010-05-02
Release date:2010-05-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Non-Cellulosomal Cohesin from the Hyperthermophilic Archaeon Archaeoglobus Fulgidus
Proteins, 79, 2011
1TYJ
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BU of 1tyj by Molmil
Crystal Structure Analysis of type II Cohesin A11 from Bacteroides cellulosolvens
Descriptor: 1,2-ETHANEDIOL, METHANOL, cellulosomal scaffoldin
Authors:Noach, I, Frolow, F, Jakoby, H, Rosenheck, S, Shimon, L.J.W, Lamed, R, Bayer, E.A.
Deposit date:2004-07-08
Release date:2005-04-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a type-II cohesin module from the Bacteroides cellulosolvens cellulosome reveals novel and distinctive secondary structural elements
J.Mol.Biol., 348, 2005
2AYP
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Crystal Structure of CHK1 with an Indol Inhibitor
Descriptor: (3Z)-6-(4-HYDROXY-3-METHOXYPHENYL)-3-(1H-PYRROL-2-YLMETHYLENE)-1,3-DIHYDRO-2H-INDOL-2-ONE, Serine/threonine-protein kinase Chk1
Authors:Lin, N.-H, Xia, P, Kovar, P, Chen, Z, Zhang, H, Rosenberg, S.H, Sham, H.L.
Deposit date:2005-09-07
Release date:2006-09-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Synthesis and biological evaluation of 3-ethylidene-1,3-dihydro-indol-2-ones as novel checkpoint 1 inhibitors
Bioorg.Med.Chem.Lett., 16, 2006
2J4Q
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Crystal structure of a E138A Escherichia coli dCTP deaminase mutant enzyme in complex with dTTP
Descriptor: DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE, MAGNESIUM ION, THYMIDINE-5'-DIPHOSPHATE, ...
Authors:Johansson, E, Thymark, M, Bynck, J.H, Fanoe, M, Larsen, S, Willemoes, M.
Deposit date:2006-09-05
Release date:2007-08-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Regulation of Dctp Deaminase from Escherichia Coli by Nonallosteric Dttp Binding to an Inactive Form of the Enzyme
FEBS J., 274, 2007
1OGH
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BU of 1ogh by Molmil
Structure of the bifunctional dCTP deaminase-dUTPase from Methanocaldococcus jannaschii
Descriptor: BIFUNCTIONAL DEAMINASE/DIPHOSPHATASE
Authors:Johansson, E, Bjornberg, O, Nyman, P.O, Larsen, S.
Deposit date:2003-05-02
Release date:2003-06-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structure of the Bifunctional Dctp Deaminase-Dutpase from Methanocaldococcus Jannaschii and its Relation to Other Homotrimeric Dutpases
J.Biol.Chem., 278, 2003
2J4H
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Crystal structure of a H121A Escherichia coli dCTP deaminase mutant enzyme
Descriptor: DEOXYCYTIDINE DIPHOSPHATE, DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE, MAGNESIUM ION
Authors:Johansson, E, Thymark, M, Bynck, J.H, Fanoe, M, Larsen, S, Willemoes, M.
Deposit date:2006-08-31
Release date:2007-08-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Regulation of Dctp Deaminase from Escherichia Coli by Nonallosteric Dttp Binding to an Inactive Form of the Enzyme
FEBS J., 274, 2007
1YI5
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BU of 1yi5 by Molmil
Crystal structure of the a-cobratoxin-AChBP complex
Descriptor: Acetylcholine-binding protein, Long neurotoxin 1
Authors:Bourne, Y, Talley, T.T, Hansen, S.B, Taylor, P, Marchot, P.
Deposit date:2005-01-11
Release date:2005-05-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Crystal structure of a Cbtx-AChBP complex reveals essential interactions between snake alpha-neurotoxins and nicotinic receptors
Embo J., 24, 2005
6GYV
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BU of 6gyv by Molmil
Lariat-capping ribozyme (circular permutation form)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lariat-capping ribozyme, MAGNESIUM ION, ...
Authors:Masquida, B, Meyer, M, Nielsen, H, Olieric, V, Roblin, P, Johansen, S.D, Westhof, E.
Deposit date:2018-07-02
Release date:2018-08-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.50003624 Å)
Cite:Speciation of a group I intron into a lariat capping ribozyme.
Proc. Natl. Acad. Sci. U.S.A., 111, 2014
3DJ7
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Crystal structure of the mouse Aurora-A catalytic domain (Asn186->Gly, Lys240->Arg, Met302->Leu) in complex with Compound 130.
Descriptor: 1-(5-{2-[(6-amino-5-bromopyrimidin-4-yl)amino]ethyl}-1,3-thiazol-2-yl)-3-[3-(trifluoromethyl)phenyl]urea, serine/threonine kinase 6
Authors:Elling, R.A, Yang, W, Erlanson, D.A, Tangonan, B.T, Hansen, S.K, Romanowski, M.J.
Deposit date:2008-06-22
Release date:2009-05-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:New fragment-based drug discovery
To be Published
1AK8
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BU of 1ak8 by Molmil
NMR SOLUTION STRUCTURE OF CERIUM-LOADED CALMODULIN AMINO-TERMINAL DOMAIN (CE2-TR1C), 23 STRUCTURES
Descriptor: CALMODULIN, CERIUM (III) ION
Authors:Bentrop, D, Bertini, I, Cremonini, M.A, Forsen, S, Luchinat, C, Malmendal, A.
Deposit date:1997-05-29
Release date:1997-09-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the paramagnetic complex of the N-terminal domain of calmodulin with two Ce3+ ions by 1H NMR.
Biochemistry, 36, 1997
2VN0
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CYP2C8DH COMPLEXED WITH TROGLITAZONE
Descriptor: (5R)-5-(4-{[(2R)-6-HYDROXY-2,5,7,8-TETRAMETHYL-3,4-DIHYDRO-2H-CHROMEN-2-YL]METHOXY}BENZYL)-1,3-THIAZOLIDINE-2,4-DIONE, CYTOCHROME P450 2C8, PALMITIC ACID, ...
Authors:Schoch, G.A, Yano, J.K, Sansen, S, Stout, C.D, Johnson, E.F.
Deposit date:2008-01-30
Release date:2008-04-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Determinants of cytochrome P450 2C8 substrate binding: structures of complexes with montelukast, troglitazone, felodipine, and 9-cis-retinoic acid.
J. Biol. Chem., 283, 2008
1GGW
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BU of 1ggw by Molmil
CDC4P FROM SCHIZOSACCHAROMYCES POMBE
Descriptor: PROTEIN (CDC4P)
Authors:Slupsky, C.M, Hemmingsen, S.M, McIntosh, L.P.
Deposit date:2000-09-25
Release date:2001-03-21
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure of Cdc4p, a contractile ring protein essential for cytokinesis in Schizosaccharomyces pombe.
J.Biol.Chem., 276, 2001
1NI1
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BU of 1ni1 by Molmil
Imidazole and cyanophenyl farnesyl transferase inhibitors
Descriptor: 2-CHLORO-5-(3-CHLORO-PHENYL)-6-[(4-CYANO-PHENYL)-(3-METHYL-3H-IMIDAZOL-4-YL)- METHOXYMETHYL]-NICOTINONITRILE, ALPHA-HYDROXYFARNESYLPHOSPHONIC ACID, Protein farnesyltransferase alpha subunit, ...
Authors:Tong, Y, Lin, N.H, Wang, L, Hasvold, L, Wang, W, Leonard, N, Li, T, Li, Q, Cohen, J, Gu, W.Z, Zhang, H, Stoll, V, Bauch, J, Marsh, K, Rosenberg, S.H, Sham, H.L.
Deposit date:2002-12-20
Release date:2004-04-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of potent imidazole and cyanophenyl containing farnesyltransferase inhibitors with improved oral bioavailability.
Bioorg.Med.Chem.Lett., 13, 2003
1KCY
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BU of 1kcy by Molmil
NMR solution structure of apo calbindin D9k (F36G + P43M mutant)
Descriptor: calbindin D9k
Authors:Nelson, M.R, Thulin, E, Fagan, P.A, Forsen, S, Chazin, W.J.
Deposit date:2001-11-12
Release date:2001-11-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The EF-hand domain: a globally cooperative structural unit.
Protein Sci., 11, 2002
2ARF
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BU of 2arf by Molmil
Solution structure of the Wilson ATPase N-domain in the presence of ATP
Descriptor: WILSON DISEASE ATPASE
Authors:Dmitriev, O, Tsivkovskii, R, Abildgaard, F, Morgan, C.T, Markley, J.L, Lutsenko, S.
Deposit date:2005-08-19
Release date:2006-02-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the N-domain of Wilson disease protein: Distinct nucleotide-binding environment and effects of disease mutations
Proc.Natl.Acad.Sci.Usa, 103, 2006
1H4H
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Oligosaccharide-binding to family 11 xylanases: both covalent intermediate and mutant-product complexes display 2,5B conformations at the active-centre
Descriptor: XYLANASE, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-xylopyranose
Authors:Sabini, E, Wilson, K.S, Danielsen, S, Schulein, M, Davies, G.J.
Deposit date:2001-05-11
Release date:2002-05-09
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Catalysis and Specificity in Enzymatic Glycoside Hydrolysis: A 2,5B Conformation for the Glycosyl-Enzyme Intermediate Revealed by the Structure of the Bacillus Agaradhaerens Family 11 Xylanase.
Chem.Biol., 6, 1999
1UWZ
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BU of 1uwz by Molmil
Bacillus subtilis cytidine deaminase with an Arg56 - Ala substitution
Descriptor: CYTIDINE DEAMINASE, TETRAHYDRODEOXYURIDINE, ZINC ION
Authors:Johansson, E, Neuhard, J, Willemoes, M, Larsen, S.
Deposit date:2004-02-18
Release date:2004-05-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural, Kinetic, and Mutational Studies of the Zinc Ion Environment in Tetrameric Cytidine Deaminase
Biochemistry, 43, 2004
1UX0
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Bacillus subtilis cytidine deaminase with an Arg56 - Gln substitution
Descriptor: CYTIDINE DEAMINASE, TETRAHYDRODEOXYURIDINE, ZINC ION
Authors:Johansson, E, Neuhard, J, Willemoes, M, Larsen, S.
Deposit date:2004-02-18
Release date:2004-05-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural, Kinetic, and Mutational Studies of the Zinc Ion Environment in Tetrameric Cytidine Deaminase
Biochemistry, 43, 2004
1UX1
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Bacillus subtilis cytidine deaminase with a Cys53His and an Arg56Gln substitution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CYTIDINE DEAMINASE, TETRAHYDRODEOXYURIDINE, ...
Authors:Johansson, E, Neuhard, J, Willemoes, M, Larsen, S.
Deposit date:2004-02-18
Release date:2004-05-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural, Kinetic, and Mutational Studies of the Zinc Ion Environment in Tetrameric Cytidine Deaminase
Biochemistry, 43, 2004
3KJ6
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Crystal structure of a Methylated beta2 Adrenergic Receptor-Fab complex
Descriptor: Beta-2 adrenergic receptor, Fab heavy chain, Fab light chain, ...
Authors:Bokoch, M.P, Zou, Y, Rasmussen, S.G.F, Liu, C.W, Nygaard, R, Rosenbaum, D.M, Fung, J.J, Choi, H.-J, Thian, F.S, Kobilka, T.S, Puglisi, J.D, Weis, W.I, Pardo, L, Prosser, S, Mueller, L, Kobilka, B.K.
Deposit date:2009-11-02
Release date:2010-02-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Ligand-specific regulation of the extracellular surface of a G-protein-coupled receptor.
Nature, 463, 2010
1ETP
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BU of 1etp by Molmil
CRYSTAL STRUCTURE OF CYTOCHROME C4 FROM PSEUDOMONAS STUTZERI
Descriptor: CYTOCHROME C4, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kadziola, A, Larsen, S.
Deposit date:1996-01-23
Release date:1997-02-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the dihaem cytochrome c4 from Pseudomonas stutzeri determined at 2.2A resolution.
Structure, 5, 1997

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