Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 43 件

3U51
DownloadVisualize
BU of 3u51 by Molmil
Src in complex with DNA-templated macrocyclic inhibitor MC1
分子名称: Proto-oncogene tyrosine-protein kinase Src, macrocyclic inhibitor MC1
著者Seeliger, M.A, Liu, D.R, Georghiou, G, Kleiner, R.E, Pulkoski-Gross, M.
登録日2011-10-10
公開日2012-02-22
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.241 Å)
主引用文献Highly specific, bisubstrate-competitive Src inhibitors from DNA-templated macrocycles.
Nat.Chem.Biol., 8, 2012
2OIQ
DownloadVisualize
BU of 2oiq by Molmil
Crystal Structure of chicken c-Src kinase domain in complex with the cancer drug imatinib.
分子名称: 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE, GLYCEROL, Proto-oncogene tyrosine-protein kinase Src
著者Seeliger, M.A, Nagar, B, Frank, F, Cao, X, Henderson, M.N, Kuriyan, J.
登録日2007-01-11
公開日2007-03-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献c-Src Binds to the Cancer Drug Imatinib with an Inactive Abl/c-Kit Conformation and a Distributed Thermodynamic Penalty.
Structure, 15, 2007
3U4W
DownloadVisualize
BU of 3u4w by Molmil
Src in complex with DNA-templated macrocyclic inhibitor MC4b
分子名称: GLYCEROL, Proto-oncogene tyrosine-protein kinase Src, SULFATE ION, ...
著者Seeliger, M.A, Liu, D.R, Georghiou, G, Kleiner, R.E, Pulkoski-Gross, M.
登録日2011-10-10
公開日2012-02-22
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Highly specific, bisubstrate-competitive Src inhibitors from DNA-templated macrocycles.
Nat.Chem.Biol., 8, 2012
3G6H
DownloadVisualize
BU of 3g6h by Molmil
Src Thr338Ile inhibited in the DFG-Asp-Out conformation
分子名称: N-{4-methyl-3-[(3-{4-[(3,4,5-trimethoxyphenyl)amino]-1,3,5-triazin-2-yl}pyridin-2-yl)amino]phenyl}-3-(trifluoromethyl)benzamide, Proto-oncogene tyrosine-protein kinase Src
著者Seeliger, M.A, Ranjitkar, P, Kasap, C, Shan, Y, Shaw, D.E, Shah, N.P, Kuriyan, J, Maly, D.J.
登録日2009-02-06
公開日2009-03-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Equally potent inhibition of c-Src and Abl by compounds that recognize inactive kinase conformations
Cancer Res., 69, 2009
3F6X
DownloadVisualize
BU of 3f6x by Molmil
c-Src kinase domain in complex with small molecule inhibitor
分子名称: Proto-oncogene tyrosine-protein kinase Src, [4-({4-[(5-cyclopropyl-1H-pyrazol-3-yl)amino]quinazolin-2-yl}amino)phenyl]acetonitrile
著者Seeliger, M.A, Statsuk, A.V, Maly, D.J, Patrick, P.Z, Kuriyan, J, Shokat, K.M.
登録日2008-11-06
公開日2008-12-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Tuning a three-component reaction for trapping kinase substrate complexes.
J.Am.Chem.Soc., 130, 2008
3G6G
DownloadVisualize
BU of 3g6g by Molmil
Equally potent inhibition of c-Src and Abl by compounds that recognize inactive kinase conformations
分子名称: GLYCEROL, N-{3-[(3-{4-[(4-methoxyphenyl)amino]-1,3,5-triazin-2-yl}pyridin-2-yl)amino]-4-methylphenyl}-4-[(4-methylpiperazin-1-yl)methyl]benzamide, Proto-oncogene tyrosine-protein kinase Src
著者Seeliger, M.A, Ranjitkar, P, Kasap, C, Shan, Y, Shaw, D.E, Shah, N.P, Kuriyan, J, Maly, D.J.
登録日2009-02-06
公開日2009-03-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Equally potent inhibition of c-Src and Abl by compounds that recognize inactive kinase conformations
Cancer Res., 69, 2009
7N99
DownloadVisualize
BU of 7n99 by Molmil
SDE2 SAP domain apo structure
分子名称: Isoform 2 of Replication stress response regulator SDE2
著者Paung, Y, Weinheimer, A.S, Rageul, J, Khan, A, Ho, B, Tong, M, Alphonse, S, Seeliger, M.A, Kim, H.
登録日2021-06-17
公開日2022-10-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Extended DNA-binding interfaces beyond the canonical SAP domain contribute to the function of replication stress regulator SDE2 at DNA replication forks.
J.Biol.Chem., 298, 2022
6MQ3
DownloadVisualize
BU of 6mq3 by Molmil
Structure of Cysteine-free Human Insulin-Degrading Enzyme in complex with Substrate-selective Macrocycle Inhibitor 63
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Insulin-degrading enzyme, {(8R,9S,10S)-9-(2',3'-dimethyl[1,1'-biphenyl]-4-yl)-6-[(1-methyl-1H-imidazol-2-yl)sulfonyl]-1,6-diazabicyclo[6.2.0]decan-10-yl}methanol
著者Tan, G.A, Seeliger, M.A, Welsh, A.J, Maianti, J.P, Liu, D.R.
登録日2018-10-09
公開日2019-04-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.569147 Å)
主引用文献Substrate-selective inhibitors that reprogram the activity of insulin-degrading enzyme.
Nat.Chem.Biol., 15, 2019
8UC4
DownloadVisualize
BU of 8uc4 by Molmil
Apo X-ray crystal structure of Cyclophilin D with a surface entropy reduction mutation (K175I)
分子名称: DI(HYDROXYETHYL)ETHER, POLYETHYLENE GLYCOL (N=34), Peptidyl-prolyl cis-trans isomerase F, ...
著者Kreitler, D.F, Rangwala, A.M, Seeliger, M.A.
登録日2023-09-25
公開日2024-08-07
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Apo X-ray crystal structure of Cyclophilin D with a surface entropy reduction mutation (K175I)
To Be Published
8UC5
DownloadVisualize
BU of 8uc5 by Molmil
Apo X-ray crystal structure of Cyclophilin D with a surface entropy reduction mutation (K175I)
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, Peptidyl-prolyl cis-trans isomerase F, ...
著者Kreitler, D.F, Rangwala, A.M, Seeliger, M.A.
登録日2023-09-25
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Apo X-ray crystal structure of Cyclophilin D with a surface entropy reduction mutation (K175I)
To Be Published
6WIW
DownloadVisualize
BU of 6wiw by Molmil
c-Src Bound to ATP-Competitive Inhibitor I14
分子名称: N-(3-{[4-amino-7-(2-methoxyethyl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]ethynyl}-4-methylphenyl)acetamide, Proto-oncogene tyrosine-protein kinase Src
著者Vilas-Boas, J, Thakur, M.K, Fang, L, Maly, D, Seeliger, M.A.
登録日2020-04-10
公開日2020-06-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献How ATP-Competitive Inhibitors Allosterically Modulate Tyrosine Kinases That Contain a Src-like Regulatory Architecture.
Acs Chem.Biol., 15, 2020
4YBK
DownloadVisualize
BU of 4ybk by Molmil
C-Helix-Out Dasatinib Analog Crystallized with c-Src Kinase
分子名称: 2-({6-[4-(2-hydroxyethyl)piperazin-1-yl]-2-methylpyrimidin-4-yl}amino)-N-(4-phenoxyphenyl)-1,3-thiazole-5-carboxamide, Proto-oncogene tyrosine-protein kinase Src
著者Kwarcinski, F.E, Brandvold, K.B, Johnson, T.K, Phadke, S, Meagher, J.L, Seeliger, M.A, Stuckey, J.A, Soellner, M.B.
登録日2015-02-18
公開日2016-03-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Conformation-Selective Analogues of Dasatinib Reveal Insight into Kinase Inhibitor Binding and Selectivity.
Acs Chem.Biol., 11, 2016
4YC8
DownloadVisualize
BU of 4yc8 by Molmil
C-Helix-Out Binding of Dasatinib Analog to c-Abl Kinase
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-({6-[4-(2-hydroxyethyl)piperazin-1-yl]-2-methylpyrimidin-4-yl}amino)-N-(4-phenoxyphenyl)-1,3-thiazole-5-carboxamide, ...
著者Kwarcinski, F.E, Brandvold, K.B, Johnson, T.J, Phadke, S, Meagher, J.L, Seeliger, M.A, Stuckey, J.A, Soellner, M.B.
登録日2015-02-19
公開日2016-03-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Conformation-Selective Analogues of Dasatinib Reveal Insight into Kinase Inhibitor Binding and Selectivity.
Acs Chem.Biol., 11, 2016
7KP6
DownloadVisualize
BU of 7kp6 by Molmil
Structure of Ack1 kinase in complex with a selective inhibitor
分子名称: 5-chloro-N~2~-[4-(4-methylpiperazin-1-yl)phenyl]-N~4~-{[(2R)-oxolan-2-yl]methyl}pyrimidine-2,4-diamine, Activated CDC42 kinase 1, CHLORIDE ION
著者Thakur, M.K, Miller, W.T, Mahajan, N, Seeliger, M.A.
登録日2020-11-10
公開日2022-02-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Inhibiting ACK1-mediated phosphorylation of C-terminal Src kinase counteracts prostate cancer immune checkpoint blockade resistance.
Nat Commun, 13, 2022
6EDS
DownloadVisualize
BU of 6eds by Molmil
Structure of Cysteine-free Human Insulin-Degrading Enzyme in complex with Glucagon and Substrate-selective Macrocyclic Inhibitor 63
分子名称: 1,4-DIETHYLENE DIOXIDE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Tan, G.A, Seeliger, M.A, Maianti, J.P, Liu, D.R, Welsh, A.J.
登録日2018-08-10
公開日2019-04-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.18071723 Å)
主引用文献Substrate-selective inhibitors that reprogram the activity of insulin-degrading enzyme.
Nat.Chem.Biol., 15, 2019
5HGI
DownloadVisualize
BU of 5hgi by Molmil
Crystal structure of apo human IRE1 alpha
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, BETA-MERCAPTOETHANOL, CESIUM ION, ...
著者Feldman, H.C, Tong, M, Wang, L, Meza-Acevedo, R, Gobillot, T.A, Gliedt, J.M, Hari, S.B, Mitra, A.K, Backes, B.J, Papa, F.R, Seeliger, M.A, Maly, D.J.
登録日2016-01-08
公開日2016-06-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.584 Å)
主引用文献Structural and Functional Analysis of the Allosteric Inhibition of IRE1 alpha with ATP-Competitive Ligands.
Acs Chem.Biol., 11, 2016
6BYZ
DownloadVisualize
BU of 6byz by Molmil
Structure of Cysteine-free Human Insulin-Degrading Enzyme in complex with Substrate-selective Macrocyclic Inhibitor 37
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ALA-ALA-ALA, Insulin-degrading enzyme, ...
著者Tan, G.A, Seeliger, M.A, Maianti, J.P, Liu, D.R.
登録日2017-12-21
公開日2019-04-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.95624852 Å)
主引用文献Substrate-selective inhibitors that reprogram the activity of insulin-degrading enzyme.
Nat.Chem.Biol., 15, 2019
6BRJ
DownloadVisualize
BU of 6brj by Molmil
DDR1 bound to VX-680
分子名称: CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE, Epithelial discoidin domain-containing receptor 1
著者Georghiou, G, Seeliger, M.A.
登録日2017-11-30
公開日2018-12-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.231 Å)
主引用文献What Makes a Kinase Promiscuous for Inhibitors?
Cell Chem Biol, 26, 2019
5BMM
DownloadVisualize
BU of 5bmm by Molmil
Src in complex with DNA-templated macrocyclic inhibitor MC25b
分子名称: Proto-oncogene tyrosine-protein kinase Src, macrocyclic inhibitor MC25b
著者Georghiou, G, Guja, K.E, Aleem, S, Kleiner, R.E, Liu, D.R, Miller, W.T, Garcia-Diaz, M, Seeliger, M.A.
登録日2015-05-22
公開日2016-09-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Biochemical Basis for Intracellular Kinase Inhibition by Src-specific Peptidic Macrocycles.
Cell Chem Biol, 23, 2016
4YBJ
DownloadVisualize
BU of 4ybj by Molmil
Type II Dasatinib Analog Crystallized with c-Src Kinase
分子名称: 2-({6-[4-(2-hydroxyethyl)piperazin-1-yl]-2-methylpyrimidin-4-yl}amino)-N-(3-{[3-(trifluoromethyl)benzoyl]amino}phenyl)-1,3-thiazole-5-carboxamide, Proto-oncogene tyrosine-protein kinase Src
著者Kwarcinski, F.E, Brandvold, K.B, Johnson, T.K, Phadke, S, Meagher, J.L, Seeliger, M.A, Stuckey, J.A, Soellner, M.B.
登録日2015-02-18
公開日2016-03-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Conformation-Selective Analogues of Dasatinib Reveal Insight into Kinase Inhibitor Binding and Selectivity.
Acs Chem.Biol., 11, 2016
6BSD
DownloadVisualize
BU of 6bsd by Molmil
DDR1 bound to Dasatinib
分子名称: Epithelial discoidin domain-containing receptor 1, N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE
著者Georghiou, G, Seeliger, M.A.
登録日2017-12-02
公開日2018-12-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.606 Å)
主引用文献What Makes a Kinase Promiscuous for Inhibitors?
Cell Chem Biol, 26, 2019
7THF
DownloadVisualize
BU of 7thf by Molmil
Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B53
分子名称: 3-(4'-{[(4S,7S,11R,13E,19S)-19-{[2-(2-aminoethoxy)ethyl]carbamoyl}-7-benzyl-3,6,12,15,21-pentaoxo-1,3,4,5,6,7,8,9,10,12,15,16,17,18,19,20,21,22-octadecahydro-2H-7,11-methano-2,5,11,16,20-benzopentaazacyclotetracosin-4-yl]methyl}[1,1'-biphenyl]-4-yl)pentanedioic acid, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
著者Rangwala, A.M, Thakur, M.K, Seeliger, M.A, Peterson, A.A, Liu, D.R.
登録日2022-01-10
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Discovery and molecular basis of subtype-selective cyclophilin inhibitors.
Nat.Chem.Biol., 18, 2022
7TH1
DownloadVisualize
BU of 7th1 by Molmil
Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B3
分子名称: (4S,7S,11R,13E,19S)-N-[2-(2-aminoethoxy)ethyl]-7-benzyl-4-[(3-methylphenyl)methyl]-3,6,12,15,21-pentaoxo-1,3,4,5,6,7,8,9,10,12,15,16,17,18,19,20,21,22-octadecahydro-2H-7,11-methano-2,5,11,16,20-benzopentaazacyclotetracosine-19-carboxamide, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
著者Rangwala, A.M, Thakur, M.K, Seeliger, M.A, Peterson, A.A, Liu, D.R.
登録日2022-01-10
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Discovery and molecular basis of subtype-selective cyclophilin inhibitors.
Nat.Chem.Biol., 18, 2022
7TGV
DownloadVisualize
BU of 7tgv by Molmil
Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B2
分子名称: (4S,7S,11R,13E,19S)-N-[2-(2-aminoethoxy)ethyl]-7-benzyl-4-[([1,1'-biphenyl]-4-yl)methyl]-3,6,12,15,21-pentaoxo-1,3,4,5,6,7,8,9,10,12,15,16,17,18,19,20,21,22-octadecahydro-2H-7,11-methano-2,5,11,16,20-benzopentaazacyclotetracosine-19-carboxamide, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
著者Rangwala, A.M, Thakur, M.K, Seeliger, M.A, Peterson, A.A, Liu, D.R.
登録日2022-01-09
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Discovery and molecular basis of subtype-selective cyclophilin inhibitors.
Nat.Chem.Biol., 18, 2022
7TGS
DownloadVisualize
BU of 7tgs by Molmil
Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor JOMBt
分子名称: (4S,7R,11S,13E,19S)-N-[2-(2-aminoethoxy)ethyl]-4-[(furan-2-yl)methyl]-3,6,12,15,21-pentaoxo-1,3,4,5,6,7,8,9,10,12,15,16,17,18,19,20,21,22-octadecahydro-2H-7,11-methano-2,5,11,16,20-benzopentaazacyclotetracosine-19-carboxamide, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
著者Rangwala, A.M, Seeliger, M.A, Peterson, A.A, Liu, D.R.
登録日2022-01-09
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Discovery and molecular basis of subtype-selective cyclophilin inhibitors.
Nat.Chem.Biol., 18, 2022

 

12>

227561

件を2024-11-20に公開中

PDB statisticsPDBj update infoContact PDBjnumon