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PDB: 1014 results

5CYV
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Crystal structure of CouR from Rhodococcus jostii RHA1 bound to p-coumaroyl-CoA
Descriptor: ACETATE ION, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Stogios, P.J, Xu, X, Dong, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-07-30
Release date:2015-08-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:The activity of CouR, a MarR family transcriptional regulator, is modulated through a novel molecular mechanism.
Nucleic Acids Res., 44, 2016
7V09
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BU of 7v09 by Molmil
Crystal structure of ECL_RS08780, putative sugar transport system periplasmic sugar-binding protein
Descriptor: MAGNESIUM ION, Multiple sugar transport system periplasmic sugar-binding protein
Authors:Stogios, P.J, Skarina, T, Mesa, N, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-05-10
Release date:2022-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of ECL_RS08780, putative sugar transport system periplasmic sugar-binding protein
To Be Published
4ZMH
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Crystal structure of a five-domain GH115 alpha-Glucuronidase from the Marine Bacterium Saccharophagus degradans 2-40T
Descriptor: ACETATE ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Nocek, B, Cui, H, Wang, W, Savchenko, A.
Deposit date:2015-05-04
Release date:2016-05-04
Last modified:2016-07-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Biochemical and Structural Characterization of a Five-domain GH115 alpha-Glucuronidase from the Marine Bacterium Saccharophagus degradans 2-40T.
J.Biol.Chem., 291, 2016
6AOJ
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Crystal structure of Legionella pneumophila effector Ceg4 with N-terminal yeast Hog1p sequence
Descriptor: CHLORIDE ION, Ceg4, MAGNESIUM ION
Authors:Stogios, P.J, Nocek, B, Cuff, M.E, Evdokimova, E, Egorova, O, Yim, V, Di Leo, R, Savchenko, A.
Deposit date:2017-08-16
Release date:2018-01-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:TheLegionella pneumophilaeffector Ceg4 is a phosphotyrosine phosphatase that attenuates activation of eukaryotic MAPK pathways.
J. Biol. Chem., 293, 2018
7JM1
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Crystal structure of aminoglycoside resistance enzyme ApmA, complex with acetyl-CoA
Descriptor: ACETYL COENZYME *A, Aminocyclitol acetyltransferase ApmA
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-07-30
Release date:2020-09-16
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structure of aminoglycoside resistance enzyme ApmA, complex with acetyl-CoA
To Be Published
7K3N
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BU of 7k3n by Molmil
Crystal Structure of NSP1 from SARS-CoV-2
Descriptor: Host translation inhibitor nsp1
Authors:Semper, C, Watanabe, N, Chang, C, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-09-11
Release date:2020-09-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural characterization of nonstructural protein 1 from SARS-CoV-2.
Iscience, 24, 2021
7JM2
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BU of 7jm2 by Molmil
Crystal structure of aminoglycoside resistance enzyme ApmA, complex with apramycin
Descriptor: APRAMYCIN, Aminocyclitol acetyltransferase ApmA, CHLORIDE ION
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-07-30
Release date:2020-09-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of aminoglycoside resistance enzyme ApmA, complex with apramycin
To Be Published
6AOK
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Crystal structure of Legionella pneumophila effector Ceg4 with N-terminal TEV protease cleavage sequence
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Ceg4, ...
Authors:Stogios, P.J, Cuff, M.E, Nocek, B, Evdokimova, E, Egorova, O, Yim, V, Di Leo, R, Savchenko, A.
Deposit date:2017-08-16
Release date:2018-01-10
Last modified:2018-03-28
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:TheLegionella pneumophilaeffector Ceg4 is a phosphotyrosine phosphatase that attenuates activation of eukaryotic MAPK pathways.
J. Biol. Chem., 293, 2018
5CZJ
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BU of 5czj by Molmil
Crystal structure of HypD, a 1-pyrroline-4-hydroxy-2-carboxylate deaminase from Sinorhizobium meliloti
Descriptor: Dihydrodipicolinate synthase
Authors:Stogios, P.J, Xu, X, Savchenko, A.
Deposit date:2015-07-31
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:l-Hydroxyproline and d-Proline Catabolism in Sinorhizobium meliloti.
J.Bacteriol., 198, 2016
6DM4
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BU of 6dm4 by Molmil
Crystal structure of the SH2 domain from RavO (Lpg1129) from Legionella pneumophila in complex with Homo sapiens Shc1 phospho-Tyr317 peptide
Descriptor: RavO, SULFATE ION, Shc1 phospho-Tyr317 peptide
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Kaneko, T, Li, S, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2018-06-04
Release date:2018-06-27
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the SH2 domain from RavO (Lpg1129) from Legionella pneumophila in complex with Homo sapiens Shc1 phospho-Tyr317 peptide
To Be Published
4JHC
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Crystal structure of the uncharacterized Maf protein YceF from E. coli
Descriptor: GLYCEROL, Maf-like protein YceF, UNKNOWN ATOM OR ION
Authors:Dong, A, Xu, X, Cui, H, Tchigvintsev, A, Flick, R, Brown, G, Popovic, A, Yakunin, A.F, Savchenko, A.
Deposit date:2013-03-04
Release date:2013-03-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Biochemical and structural studies of conserved maf proteins revealed nucleotide pyrophosphatases with a preference for modified nucleotides.
Chem.Biol., 20, 2013
9BIZ
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BU of 9biz by Molmil
Crystal structure of the periplasmic domain of IgaA from Klebsiella pneumoniae
Descriptor: Intracellular growth attenuator protein igaA
Authors:Watanabe, N, Savchenko, A, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2024-04-24
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular insights into the initiation step of the Rcs signaling pathway.
Structure, 2024
9BJ0
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BU of 9bj0 by Molmil
Crystal structure of the periplasmic domain of IgaA from Escherichia coli
Descriptor: Intracellular growth attenuator protein igaA
Authors:Watanabe, N, Savchenko, A, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2024-04-24
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Molecular insights into the initiation step of the Rcs signaling pathway.
Structure, 2024
9BIY
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BU of 9biy by Molmil
Crystal structure of the periplasmic domain of IgaA from Escherichia coli
Descriptor: Intracellular growth attenuator protein igaA, Outer membrane lipoprotein RcsF
Authors:Watanabe, N, Savchenko, A, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2024-04-24
Release date:2024-07-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular insights into the initiation step of the Rcs signaling pathway.
Structure, 2024
5F46
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BU of 5f46 by Molmil
Crystal structure of an aminoglycoside acetyltransferase meta-AAC0020 from an uncultured soil metagenomic sample, apoenzyme form
Descriptor: CHLORIDE ION, aminoglycoside acetyltransferase meta-AAC0020
Authors:Xu, Z, Skarina, T, Stogios, P.J, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-12-03
Release date:2015-12-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Functional Survey of Environmental Aminoglycoside Acetyltransferases Reveals Functionality of Resistance Enzymes.
ACS Infect Dis, 3, 2017
5F48
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BU of 5f48 by Molmil
Crystal structure of an aminoglycoside acetyltransferase meta-AAC0020 from an uncultured soil metagenomic sample in complex with coenzyme A
Descriptor: CHLORIDE ION, COENZYME A, MAGNESIUM ION, ...
Authors:Xu, Z, Skarina, T, Stogios, P.J, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-12-03
Release date:2015-12-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and Functional Survey of Environmental Aminoglycoside Acetyltransferases Reveals Functionality of Resistance Enzymes.
ACS Infect Dis, 3, 2017
6VTV
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BU of 6vtv by Molmil
Crystal structure of PuuD gamma-glutamyl-gamma-aminobutyrate hydrolase from E. coli
Descriptor: Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD, MANGANESE (II) ION
Authors:Stogios, P.J, EVDOKIMOVA, E, DI LEO, R, SAVCHENKO, A, JOACHIMIAK, A, SATCHELL, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-02-13
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:PuuD gamma-glutamyl-gamma-aminobutyrate hydrolase
To Be Published
5F47
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Crystal structure of an aminoglycoside acetyltransferase meta-AAC0020 from an uncultured soil metagenomic sample in complex with trehalose
Descriptor: CALCIUM ION, CHLORIDE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose, ...
Authors:Xu, Z, Skarina, T, Wawrzak, Z, Stogios, P.J, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-12-03
Release date:2015-12-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.497 Å)
Cite:Structural and Functional Survey of Environmental Aminoglycoside Acetyltransferases Reveals Functionality of Resistance Enzymes.
ACS Infect Dis, 3, 2017
5FBT
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BU of 5fbt by Molmil
Crystal structure of rifampin phosphotransferase RPH-Lm from Listeria monocytogenes in complex with rifampin
Descriptor: CHLORIDE ION, Phosphoenolpyruvate synthase, Rifampin
Authors:Stogios, P.J, Wawrzak, Z, Skarina, T, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-12-14
Release date:2015-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Rifampin phosphotransferase is an unusual antibiotic resistance kinase.
Nat Commun, 7, 2016
6BNF
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BU of 6bnf by Molmil
Crystal structure of the intrinsic colistin resistance enzyme ICR(Mc) from Moraxella catarrhalis, catalytic domain, mono-zinc complex
Descriptor: ACETATE ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Stogios, P.J, Evdokimova, E, Wawrzak, Z, Di Leo, R, Savchenko, A, Anderson, W.F, Satchell, K.J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-11-16
Release date:2018-01-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Substrate recognition by a colistin resistance enzyme from Moraxella catarrhalis.
ACS Chem. Biol., 2018
6BRD
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BU of 6brd by Molmil
Crystal structure of rifampin monooxygenase from Streptomyces venezuelae, complexed with rifampin and FAD
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Cox, G, Kelso, J, Stogios, P.J, Savchenko, A, Anderson, W.F, Wright, G.D, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-11-30
Release date:2017-12-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.32 Å)
Cite:Rox, a Rifamycin Resistance Enzyme with an Unprecedented Mechanism of Action.
Cell Chem Biol, 25, 2018
6BVC
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Crystal structure of AAC(3)-Ia in complex with coenzyme A
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Aminoglycoside-(3)-N-acetyltransferase, CHLORIDE ION, ...
Authors:Stogios, P.J, Evdokimova, E, Wawrzak, Z, Savchenko, A, Joachimiak, A, Satchell, K, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-12-12
Release date:2017-12-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.808 Å)
Cite:To be published
To Be Published
6MN5
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Crystal structure of aminoglycoside acetyltransferase AAC(3)-IVa, H154A mutant, in complex with gentamicin C1A
Descriptor: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 1,2-ETHANEDIOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ...
Authors:Stogios, P.J, Evdokimova, E, Kim, Y, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-10-01
Release date:2018-10-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
5TSC
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BU of 5tsc by Molmil
The crystal structure of Lpg2147 from Legionella pneumophila
Descriptor: Uncharacterized protein
Authors:Valleau, D, Xu, X, Cui, H, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2016-10-28
Release date:2016-11-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.008 Å)
Cite:The crystal structure of Lpg2147 from Legionella pneumophila
To Be Published
6MN4
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Crystal structure of aminoglycoside acetyltransferase AAC(3)-IVa, H154A mutant, in complex with apramycin
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, APRAMYCIN, ...
Authors:Stogios, P.J, Evdokimova, E, Michalska, K, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-10-01
Release date:2018-10-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022

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PDB entries from 2024-08-07

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