Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 239 results

3S4G
DownloadVisualize
BU of 3s4g by Molmil
Low Resolution Structure of STNV complexed with RNA
Descriptor: Capsid protein, RNA (5'-R(P*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*U)-3')
Authors:Lane, S.W, Dennis, C.A, Lane, C.L, Trinh, C.H, Rizkallah, P.J, Stockley, P.G, Phillips, S.E.V.
Deposit date:2011-05-19
Release date:2011-08-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (6 Å)
Cite:Construction and crystal structure of recombinant STNV capsids.
J.Mol.Biol., 413, 2011
6QU8
DownloadVisualize
BU of 6qu8 by Molmil
Adenovirus Serotype 26 (Ad26) in complex with sialic acid, pH8.0
Descriptor: 1,2-ETHANEDIOL, Fiber, N-acetyl-alpha-neuraminic acid, ...
Authors:Baker, A.T, Rizkallah, P.J, Parker, A.L, Mundy, R.M.
Deposit date:2019-02-26
Release date:2019-09-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Human adenovirus type 26 uses sialic acid-bearing glycans as a primary cell entry receptor.
Sci Adv, 5, 2019
4WQ2
DownloadVisualize
BU of 4wq2 by Molmil
Human calpain PEF(S) with (Z)-3-(6-bromondol-3-yl)-2-mercaptoacrylic acid bound
Descriptor: (2Z)-3-(6-bromo-1H-indol-3-yl)-2-sulfanylprop-2-enoic acid, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:Adams, S.E, Rizkallah, P.J, Miller, D.J, Hallett, M.B, Allemann, R.K.
Deposit date:2014-10-21
Release date:2015-09-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Conformationally restricted calpain inhibitors.
Chem Sci, 6, 2015
6QZD
DownloadVisualize
BU of 6qzd by Molmil
HLA-DR1 with SGP Influenza Matrix Peptide
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Greenshields-Watson, A, Rizkallah, P.J.
Deposit date:2019-03-11
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:CD4+T Cells Recognize Conserved Influenza A Epitopes through Shared Patterns of V-Gene Usage and Complementary Biochemical Features.
Cell Rep, 32, 2020
4WQ3
DownloadVisualize
BU of 4wq3 by Molmil
Human calpain PEF(S) with (2Z,2Z')-2,2'-disulfanediylbis(3-(6-bromoindol-3-yl)acrylic acid) bound
Descriptor: (2Z)-3-(6-bromo-1H-indol-3-yl)-2-sulfanylprop-2-enoic acid, CALCIUM ION, Calpain small subunit 1
Authors:Adams, S.E, Robinson, E.J, Rizkallah, P.J, Miller, D.J, Hallett, M.B, Allemann, R.K.
Deposit date:2014-10-21
Release date:2015-09-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Conformationally restricted calpain inhibitors.
Chem Sci, 6, 2015
6QPM
DownloadVisualize
BU of 6qpm by Molmil
Adenovirus serotype 10 Fiber-Knob
Descriptor: Fiber protein
Authors:Baker, A.T, Rizkallah, P.J.
Deposit date:2019-02-14
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.39 Å)
Cite:Development of a low-seroprevalence, alpha v beta 6 integrin-selective virotherapy based on human adenovirus type 10.
Mol Ther Oncolytics, 25, 2022
6QPN
DownloadVisualize
BU of 6qpn by Molmil
Adenovirus species D serotype 49 Fiber-Knob
Descriptor: Fiber, SULFATE ION
Authors:Baker, A.T, Rizkallah, P.J.
Deposit date:2019-02-14
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:The Fiber Knob Protein of Human Adenovirus Type 49 Mediates Highly Efficient and Promiscuous Infection of Cancer Cell Lines Using a Novel Cell Entry Mechanism
Journal of Virology, 95, 2021
6QZA
DownloadVisualize
BU of 6qza by Molmil
HLA-DR1 with GMF Influenza PB1 Peptide
Descriptor: HLA class II histocompatibility antigen, DR alpha chain, DRB1-1 beta chain, ...
Authors:Greenshields-Watson, A, Rizkallah, P.J.
Deposit date:2019-03-11
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:CD4+T Cells Recognize Conserved Influenza A Epitopes through Shared Patterns of V-Gene Usage and Complementary Biochemical Features.
Cell Rep, 32, 2020
6QPO
DownloadVisualize
BU of 6qpo by Molmil
Adenovirus species D serotype 49 Fiber-Knob KO1 mutant
Descriptor: Fiber, SULFATE ION
Authors:Baker, A.T, Rizkallah, P.J.
Deposit date:2019-02-14
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The Fiber Knob Protein of Human Adenovirus Type 49 Mediates Highly Efficient and Promiscuous Infection of Cancer Cell Lines Using a Novel Cell Entry Mechanism.
J.Virol., 95, 2021
1S44
DownloadVisualize
BU of 1s44 by Molmil
The structure and refinement of apocrustacyanin C2 to 1.6A resolution and the search for differences between this protein and the homologous apoproteins A1 and C1.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Crustacyanin A1 subunit, GLYCEROL, ...
Authors:Habash, J, Helliwell, J.R, Raftery, J, Cianci, M, Rizkallah, P.J, Chayen, N.E, Nneji, G.A, Zagalsky, P.F.
Deposit date:2004-01-15
Release date:2004-04-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structure and refinement of apocrustacyanin C2 to 1.3 A resolution and the search for differences between this protein and the homologous apoproteins A1 and C1.
Acta Crystallogr.,Sect.D, 60, 2004
1S2P
DownloadVisualize
BU of 1s2p by Molmil
The structure and refinement of apocrustacyanin C2 to 1.3A resolution and the search for differences between this protein and the homologous apoproteins A1 and C1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Crustacyanin C2 subunit, SULFATE ION
Authors:Habash, J, Helliwell, J.R, Raftery, J, Cianci, M, Rizkallah, P.J, Chayen, N.E, NNeji, G.A, Zakalsky, P.F.
Deposit date:2004-01-09
Release date:2004-03-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The structure and refinement of apocrustacyanin C2 to 1.3 A resolution and the search for differences between this protein and the homologous apoproteins A1 and C1.
Acta Crystallogr.,Sect.D, 60, 2004
4EUL
DownloadVisualize
BU of 4eul by Molmil
Crystal structure of enhanced Green Fluorescent Protein to 1.35A resolution reveals alternative conformations for Glu222
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Green fluorescent protein, ...
Authors:Jones, D.D, Arpino, J.A.J, Rizkallah, P.J.
Deposit date:2012-04-25
Release date:2012-10-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of enhanced green fluorescent protein to 1.35 a resolution reveals alternative conformations for glu222.
Plos One, 7, 2012
2P5E
DownloadVisualize
BU of 2p5e by Molmil
Crystal Structures of High Affinity Human T-Cell Receptors Bound to pMHC Reveal Native Diagonal Binding Geometry
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-2-microglobulin, Cancer/testis antigen 1B, ...
Authors:Sami, M, Rizkallah, P.J, Dunn, S, Li, Y, Moysey, R, Vuidepot, A, Baston, E, Todorov, P, Molloy, P, Gao, F, Boulter, J.M, Jakobsen, B.K.
Deposit date:2007-03-15
Release date:2007-09-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structures of high affinity human T-cell receptors bound to peptide major histocompatibility complex reveal native diagonal binding geometry
Protein Eng.Des.Sel., 20, 2007
2PYF
DownloadVisualize
BU of 2pyf by Molmil
Crystal Structures of High Affinity Human T-Cell Receptors Bound to pMHC RevealNative Diagonal Binding Geometry Unbound TCR Clone 5-1
Descriptor: SULFATE ION, T-Cell Receptor, Alpha Chain, ...
Authors:Sami, M, Rizkallah, P.J, Dunn, S, Li, Y, Moysey, R, Vuidepot, A, Baston, E, Todorov, P, Molloy, P, Gao, F, Boulter, J.M, Jakobsen, B.K.
Deposit date:2007-05-16
Release date:2007-09-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of high affinity human T-cell receptors bound to peptide major histocompatibility complex reveal native diagonal binding geometry
Protein Eng.Des.Sel., 20, 2007
2P5W
DownloadVisualize
BU of 2p5w by Molmil
Crystal structures of high affinity human T-cell receptors bound to pMHC reveal native diagonal binding geometry
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-2-microglobulin, CALCIUM ION, ...
Authors:Sami, M, Rizkallah, P.J, Dunn, S, Li, Y, Moysey, R, Vuidepot, A, Baston, E, Todorov, P, Molloy, P, Gao, F, Boulter, J.M, Jakobsen, B.K.
Deposit date:2007-03-16
Release date:2007-09-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of high affinity human T-cell receptors bound to peptide major histocompatibility complex reveal native diagonal binding geometry
Protein Eng.Des.Sel., 20, 2007
2PYE
DownloadVisualize
BU of 2pye by Molmil
Crystal Structures of High Affinity Human T-Cell Receptors Bound to pMHC RevealNative Diagonal Binding Geometry TCR Clone C5C1 Complexed with MHC
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, Beta-2-microglobulin, Cancer/testis antigen 1B, ...
Authors:Sami, M, Rizkallah, P.J, Dunn, S, Li, Y, Moysey, R, Vuidepot, A, Baston, E, Todorov, P, Molloy, P, Gao, F, Boulter, J.M, Jakobsen, B.K.
Deposit date:2007-05-16
Release date:2007-09-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of high affinity human T-cell receptors bound to peptide major histocompatibility complex reveal native diagonal binding geometry
Protein Eng.Des.Sel., 20, 2007
7P1Y
DownloadVisualize
BU of 7p1y by Molmil
A small alarmone hydrolase TdActApo2 mutant - T78N
Descriptor: CHLORIDE ION, HD domain-containing protein, MANGANESE (II) ION
Authors:Jin, Y, Roth, C, Rizkallah, P.
Deposit date:2021-07-02
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:A small alarmone hydrolase TdActApo2 mutant - T78N
To Be Published
2BNU
DownloadVisualize
BU of 2bnu by Molmil
Structural and kinetic basis for heightened immunogenicity of T cell vaccines
Descriptor: T-CELL RECEPTOR ALPHA CHAIN C REGION, T-CELL RECEPTOR BETA CHAIN C REGION
Authors:Chen, J.-L, Stewart-Jones, G, Bossi, G, Lissin, N.M, Wooldridge, L, Choi, E.M.L, Held, G, Dunbar, P.R, Esnouf, R.M, Sami, M, Boultier, J.M, Rizkallah, P.J, Renner, C, Sewell, A, Van Der Merwe, P.A, Jackobsen, B.K, Griffiths, G, Jones, E.Y, Cerundolo, V.
Deposit date:2005-04-04
Release date:2005-05-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and Kinetic Basis for Heightened Immunogenicity of T Cell Vaccines.
J.Exp.Med., 201, 2005
2BNQ
DownloadVisualize
BU of 2bnq by Molmil
Structural and kinetic basis for heightened immunogenicity of T cell vaccines
Descriptor: BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, SYNTHETIC PEPTIDE, ...
Authors:Chen, J.-L, Stewart-Jones, G, Bossi, G, Lissin, N.M, Wooldridge, L, Choi, E.M.L, Held, G, Dunbar, P.R, Esnouf, R.M, Sami, M, Boultier, J.M, Rizkallah, P.J, Renner, C, Sewell, A, van der Merwe, P.A, Jackobsen, B.K, Griffiths, G, Jones, E.Y, Cerundolo, V.
Deposit date:2005-03-31
Release date:2005-05-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Kinetic Basis for Heightened Immunogenicity of T Cell Vaccines
J.Exp.Med., 201, 2005
2BNR
DownloadVisualize
BU of 2bnr by Molmil
Structural and kinetic basis for heightened immunogenicity of T cell vaccines
Descriptor: BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, SYNTHETIC PEPTIDE, ...
Authors:Chen, J.-L, Stewart-Jones, G, Bossi, G, Lissin, N.M, Wooldridge, L, Choi, E.M.L, Held, G, Dunbar, P.R, Esnouf, R.M, Sami, M, Boultier, J.M, Rizkallah, P.J, Renner, C, Sewell, A, van der Merwe, P.A, Jackobsen, B.K, Griffiths, G, Jones, E.Y, Cerundolo, V.
Deposit date:2005-03-31
Release date:2005-05-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Kinetic Basis for Heightened Immunogenicity of T Cell Vaccines
J.Exp.Med., 201, 2005
6HBY
DownloadVisualize
BU of 6hby by Molmil
HLA class II peptide flanking residues tune the immunogenicity of a human tumor-derived epitope
Descriptor: 1,2-ETHANEDIOL, ARRPPLAELAALNLSGSRL 5T4 tumour epitope, HLA class II histocompatibility antigen, ...
Authors:MacLachlan, B, Rizkallah, P.J, Sewell, A.K, Cole, D.K, Godkin, A.J.
Deposit date:2018-08-13
Release date:2019-08-14
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Human leukocyte antigen (HLA) class II peptide flanking residues tune the immunogenicity of a human tumor-derived epitope.
J.Biol.Chem., 294, 2019
8BEY
DownloadVisualize
BU of 8bey by Molmil
Structure of the Lysinibacillus sphaericus Tpp49Aa1 pesticidal protein at pH 7
Descriptor: Cry49Aa protein
Authors:Williamson, L.J, Rizkallah, P.J, Berry, C, Oberthur, D, Galchenkova, M, Yefanov, O, Bean, R.
Deposit date:2022-10-22
Release date:2023-11-01
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structure of the Lysinibacillus sphaericus Tpp49Aa1 pesticidal protein elucidated from natural crystals using MHz-SFX.
Proc.Natl.Acad.Sci.USA, 120, 2023
8BEX
DownloadVisualize
BU of 8bex by Molmil
Structure of the Lysinibacillus sphaericus Tpp49Aa1 pesticidal protein at pH 3
Descriptor: Cry49Aa protein
Authors:Williamson, L.J, Rizkallah, P.J, Berry, C, Oberthur, D, Galchenkova, M, Yefanov, O, Bean, R.
Deposit date:2022-10-22
Release date:2023-11-01
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure of the Lysinibacillus sphaericus Tpp49Aa1 pesticidal protein elucidated from natural crystals using MHz-SFX.
Proc.Natl.Acad.Sci.USA, 120, 2023
8BEZ
DownloadVisualize
BU of 8bez by Molmil
Structure of the Lysinibacillus sphaericus Tpp49Aa1 pesticidal protein at pH 11
Descriptor: Cry49Aa protein
Authors:Williamson, L.J, Rizkallah, P.J, Berry, C, Oberthur, D, Galchenkova, M, Yefanov, O, Bean, R.
Deposit date:2022-10-22
Release date:2023-11-01
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of the Lysinibacillus sphaericus Tpp49Aa1 pesticidal protein elucidated from natural crystals using MHz-SFX.
Proc.Natl.Acad.Sci.USA, 120, 2023
5DY6
DownloadVisualize
BU of 5dy6 by Molmil
Enhanced superfolder GFP with DBCO at 148
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Jones, D.D, Rizkallah, P.J, Worthy, H.L.
Deposit date:2015-09-24
Release date:2016-07-13
Last modified:2018-05-30
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Molecular basis for functional switching of GFP by two disparate non-native post-translational modifications of a phenyl azide reaction handle.
Chem Sci, 7, 2016

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon