Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 159 件

5LMO
DownloadVisualize
BU of 5lmo by Molmil
Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1B)
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
登録日2016-08-01
公開日2016-10-05
最終更新日2019-10-02
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
1XNR
DownloadVisualize
BU of 1xnr by Molmil
Crystal Structure of an Inosine-Cytosine Wobble Base Pair in the Context of the Decoding Center
分子名称: 16S Ribosomal RNA, 16S Ribosomal protein S10, 16S Ribosomal protein S11, ...
著者Murphy, F.V, Ramakrishnan, V.
登録日2004-10-05
公開日2004-12-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of a purine-purine wobble base pair in the decoding center of the ribosome.
Nat.Struct.Mol.Biol., 11, 2004
3JAH
DownloadVisualize
BU of 3jah by Molmil
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
著者Brown, A, Shao, S, Murray, J, Hegde, R.S, Ramakrishnan, V.
登録日2015-06-10
公開日2015-08-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Structural basis for stop codon recognition in eukaryotes.
Nature, 524, 2015
1XMO
DownloadVisualize
BU of 1xmo by Molmil
Crystal Structure of mnm5U34t6A37-tRNALysUUU Complexed with AAG-mRNA in the Decoding Center
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Murphy, F.V, Ramakrishnan, V, Malkiewicz, A, Agris, P.F.
登録日2004-10-04
公開日2004-12-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献The role of modifications in codon discrimination by tRNA(Lys)(UUU).
Nat.Struct.Mol.Biol., 11, 2004
3JAG
DownloadVisualize
BU of 3jag by Molmil
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
著者Brown, A, Shao, S, Murray, J, Hegde, R.S, Ramakrishnan, V.
登録日2015-06-10
公開日2015-08-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献Structural basis for stop codon recognition in eukaryotes.
Nature, 524, 2015
1XNQ
DownloadVisualize
BU of 1xnq by Molmil
Structure of an Inosine-Adenine Wobble Base Pair Complex in the Context of the Decoding Center
分子名称: 16S ribosomal RNA, Anticodon tRNA, MAGNESIUM ION, ...
著者Murphy, F.V, Ramakrishnan, V.
登録日2004-10-05
公開日2004-12-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structure of a purine-purine wobble base pair in the decoding center of the ribosome.
Nat.Struct.Mol.Biol., 11, 2004
1XMQ
DownloadVisualize
BU of 1xmq by Molmil
Crystal Structure of t6A37-ASLLysUUU AAA-mRNA Bound to the Decoding Center
分子名称: 16s ribosomal RNA, 30S Ribosomal Protein S10, 30S Ribosomal Protein S11, ...
著者Murphy, F.V, Ramakrishnan, V, Malkiewicz, A, Agris, P.F.
登録日2004-10-04
公開日2004-12-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The role of modifications in codon discrimination by tRNA(Lys)(UUU).
Nat.Struct.Mol.Biol., 11, 2004
3JAI
DownloadVisualize
BU of 3jai by Molmil
Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
著者Brown, A, Shao, S, Murray, J, Hegde, R.S, Ramakrishnan, V.
登録日2015-06-10
公開日2015-08-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献Structural basis for stop codon recognition in eukaryotes.
Nature, 524, 2015
1WHI
DownloadVisualize
BU of 1whi by Molmil
RIBOSOMAL PROTEIN L14
分子名称: RIBOSOMAL PROTEIN L14
著者Davies, C, White, S.W, Ramakrishnan, V.
登録日1996-01-10
公開日1996-08-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The crystal structure of ribosomal protein L14 reveals an important organizational component of the translational apparatus.
Structure, 4, 1996
3J81
DownloadVisualize
BU of 3j81 by Molmil
CryoEM structure of a partial yeast 48S preinitiation complex
分子名称: 18S rRNA, MAGNESIUM ION, METHIONINE, ...
著者Hussain, T, Llacer, J.L, Fernandez, I.S, Savva, C.G, Ramakrishnan, V.
登録日2014-08-29
公開日2014-11-05
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural changes enable start codon recognition by the eukaryotic translation initiation complex.
Cell(Cambridge,Mass.), 159, 2014
3J7Y
DownloadVisualize
BU of 3j7y by Molmil
Structure of the large ribosomal subunit from human mitochondria
分子名称: 16S rRNA, ADENOSINE MONOPHOSPHATE, CRIF1, ...
著者Brown, A, Amunts, A, Bai, X.C, Sugimoto, Y, Edwards, P.C, Murshudov, G, Scheres, S.H.W, Ramakrishnan, V.
登録日2014-08-26
公開日2014-10-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of the large ribosomal subunit from human mitochondria.
Science, 346, 2014
3J9M
DownloadVisualize
BU of 3j9m by Molmil
Structure of the human mitochondrial ribosome (class 1)
分子名称: 12S rRNA, 16S rRNA, E-site tRNA, ...
著者Amunts, A, Brown, A, Toots, J, Scheres, S.H, Ramakrishnan, V.
登録日2015-02-08
公開日2015-04-15
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Ribosome. The structure of the human mitochondrial ribosome.
Science, 348, 2015
3J6B
DownloadVisualize
BU of 3j6b by Molmil
Structure of the yeast mitochondrial large ribosomal subunit
分子名称: 21S ribosomal RNA, 54S ribosomal protein IMG1, mitochondrial, ...
著者Amunts, A, Brown, A, Bai, X.C, Llacer, J.L, Hussain, T, Emsley, P, Long, F, Murshudov, G, Scheres, S.H.W, Ramakrishnan, V.
登録日2014-01-22
公開日2014-04-09
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of the yeast mitochondrial large ribosomal subunit.
Science, 343, 2014
3JAM
DownloadVisualize
BU of 3jam by Molmil
CryoEM structure of 40S-eIF1A-eIF1 complex from yeast
分子名称: 18S rRNA, MAGNESIUM ION, RACK1, ...
著者Llacer, J.L, Hussain, T, Ramakrishnan, V.
登録日2015-06-17
公開日2015-08-12
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex.
Mol.Cell, 59, 2015
3J80
DownloadVisualize
BU of 3j80 by Molmil
CryoEM structure of 40S-eIF1-eIF1A preinitiation complex
分子名称: 18S rRNA, MAGNESIUM ION, RACK1, ...
著者Hussain, T, Llacer, J.L, Fernandez, I.S, Savva, C.G, Ramakrishnan, V.
登録日2014-08-28
公開日2014-11-05
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Structural changes enable start codon recognition by the eukaryotic translation initiation complex.
Cell(Cambridge,Mass.), 159, 2014
3JAP
DownloadVisualize
BU of 3jap by Molmil
Structure of a partial yeast 48S preinitiation complex in closed conformation
分子名称: 18S rRNA, MAGNESIUM ION, METHIONINE, ...
著者Llacer, J.L, Hussain, T, Ramakrishnan, V.
登録日2015-06-18
公開日2015-08-12
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex.
Mol.Cell, 59, 2015
6GSN
DownloadVisualize
BU of 6gsn by Molmil
Structure of a partial yeast 48S preinitiation complex in closed conformation
分子名称: 18S rRNA (1798-MER), 40S ribosomal protein S0, 40S ribosomal protein S1, ...
著者Llacer, J.L, Hussain, T, Ramakrishnan, V.
登録日2018-06-14
公開日2019-06-26
最終更新日2021-10-27
実験手法ELECTRON MICROSCOPY (5.75 Å)
主引用文献Large-scale movement of eIF3 domains during translation initiation modulate start codon selection.
Nucleic Acids Res., 2021
4JYA
DownloadVisualize
BU of 4jya by Molmil
Crystal structures of pseudouridinilated stop codons with ASLs
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Fernandez, I.S, Ng, C.L, Kelley, A.C, Guowei, W, Yu, Y.T, Ramakrishnan, V.
登録日2013-03-29
公開日2013-06-26
最終更新日2013-08-21
実験手法X-RAY DIFFRACTION (3.098 Å)
主引用文献Unusual base pairing during the decoding of a stop codon by the ribosome.
Nature, 500, 2013
4JV5
DownloadVisualize
BU of 4jv5 by Molmil
Crystal structures of pseudouridinilated stop codons with ASLs
分子名称: 16S ribosomal RNA, 30S ribosomal protein 20, 30S ribosomal protein S10, ...
著者Fernandez, I.S, Ng, C.L, Kelley, A.C, Guowei, W, Yu, Y.T, Ramakrishnan, V.
登録日2013-03-25
公開日2013-06-26
最終更新日2013-08-21
実験手法X-RAY DIFFRACTION (3.162 Å)
主引用文献Unusual base pairing during the decoding of a stop codon by the ribosome.
Nature, 500, 2013
4K0K
DownloadVisualize
BU of 4k0k by Molmil
Crystal structure of the Thermus thermophilus 30S ribosomal subunit complexed with a serine-ASL and mRNA containing a stop codon
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Fernandez, I.S, Ng, C.L, Kelley, A.C, Guowei, W, Yu, Y.T, Ramakrishnan, V.
登録日2013-04-04
公開日2013-06-26
最終更新日2013-08-21
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Unusual base pairing during the decoding of a stop codon by the ribosome.
Nature, 500, 2013
5LZX
DownloadVisualize
BU of 5lzx by Molmil
Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ...
著者Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S.
登録日2016-10-02
公開日2016-11-30
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.
Cell, 167, 2016
5LZV
DownloadVisualize
BU of 5lzv by Molmil
Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
著者Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S.
登録日2016-10-02
公開日2016-11-30
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.
Cell, 167, 2016
5LZW
DownloadVisualize
BU of 5lzw by Molmil
Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
著者Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S.
登録日2016-10-02
公開日2016-11-30
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.53 Å)
主引用文献Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.
Cell, 167, 2016
4KHP
DownloadVisualize
BU of 4khp by Molmil
Structure of the Thermus thermophilus 30S ribosomal subunit in complex with de-6-MSA-pactamycin
分子名称: 16S Ribosomal RNA, 30S Ribosomal protein S10, 30S Ribosomal protein S11, ...
著者Tourigny, D.S, Fernandez, I.S, Kelley, A.C, Ramakrishnan, V.
登録日2013-05-01
公開日2013-06-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal Structure of a Bioactive Pactamycin Analog Bound to the 30S Ribosomal Subunit.
J.Mol.Biol., 425, 2013
4B3T
DownloadVisualize
BU of 4b3t by Molmil
Crystal structure of the 30S ribosome in complex with compound 39
分子名称: (2S,3S,4R,5R,6R)-2-(aminomethyl)-5-azanyl-6-[(2R,3S,4R,5S)-5-[(1R,2R,3S,5R,6S)-3,5-bis(azanyl)-2-[(2S,3R,4R,5S,6R)-3-azanyl-5-[(4-chlorophenyl)methoxy]-6-(hydroxymethyl)-4-oxidanyl-oxan-2-yl]oxy-6-oxidanyl-cyclohexyl]oxy-2-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl]oxy-oxane-3,4-diol, 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
著者Ng, C.L, Lang, K, Shcherbakov, D, Matt, T, Perez-Fernandez, D, Patak, R, Meyer, M, Duscha, S, Akbergenov, R, Boukari, H, Freihofer, P, Kudyba, I, Reddy, M.S.K, Nandurikar, R.S, Ramakrishnan, V, Vasella, A, Bottger, E.C.
登録日2012-07-26
公開日2013-08-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献4'-O-Substitutions Determine Selectivity of Aminoglycoside Antibiotics
Nat.Commun., 5, 2014

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon