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PDB: 94 results

3KET
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BU of 3ket by Molmil
Crystal structure of a Rex-family transcriptional regulatory protein from Streptococcus agalactiae bound to a palindromic operator
Descriptor: DNA (5'-D(*AP*AP*TP*TP*GP*TP*GP*AP*AP*AP*T)-3'), DNA (5'-D(P*AP*TP*TP*TP*CP*AP*CP*AP*AP*TP*T)-3'), MAGNESIUM ION, ...
Authors:Thiyagarajan, S, Logan, D, von Wachenfeldt, C.
Deposit date:2009-10-26
Release date:2010-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:NAD+ pool depletion as a signal for the Rex regulon involved in Streptococcus agalactiae virulence.
Plos Pathog., 17, 2021
3KEO
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Crystal Structure of a Rex-family transcriptional regulatory protein from Streptococcus agalactiae complexed with NAD+
Descriptor: CHLORIDE ION, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Thiyagarajan, S, Logan, D, von Wachenfeldt, C.
Deposit date:2009-10-26
Release date:2010-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:NAD+ pool depletion as a signal for the Rex regulon involved in Streptococcus agalactiae virulence.
Plos Pathog., 17, 2021
3KEQ
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BU of 3keq by Molmil
Crystal structure of a Rex-family transcriptional regulatory protein from Streptococcus agalactiae complexed with NAD+
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Redox-sensing transcriptional repressor rex
Authors:Thiyagarajan, S, Logan, D, von Wachenfeldt, C.
Deposit date:2009-10-26
Release date:2010-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:NAD+ pool depletion as a signal for the Rex regulon involved in Streptococcus agalactiae virulence.
Plos Pathog., 17, 2021
1LJX
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BU of 1ljx by Molmil
THE STRUCTURE OF D(TPGPCPGPCPA)2 AT 293K: COMPARISON OF THE EFFECT OF SEQUENCE AND TEMPERATURE
Descriptor: 5'-D(*TP*GP*CP*GP*CP*A)-3', MAGNESIUM ION
Authors:Thiyagarajan, S, Satheesh Kumar, P, Rajan, S.S, Gautham, N.
Deposit date:2002-04-23
Release date:2002-05-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of d(TGCGCA)2 at 293 K: comparison of the effects of sequence and temperature.
Acta Crystallogr.,Sect.D, 58, 2002
1XAM
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BU of 1xam by Molmil
Cobalt hexammine induced tautameric shift in Z-DNA: structure of d(CGCGCA).d(TGCGCG) in two crystal forms.
Descriptor: CGCGCA, COBALT HEXAMMINE(III), TG, ...
Authors:Thiyagarajan, S, Rajan, S.S, Gautham, N.
Deposit date:2004-08-26
Release date:2004-11-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Cobalt hexammine induced tautomeric shift in Z-DNA: the structure of d(CGCGCA)*d(TGCGCG) in two crystal forms.
Nucleic Acids Res., 32, 2004
1XA2
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Cobalt hexammine induced tautomeric shift in Z-DNA: the structure of d(CGCGCA).d(TGCGCG) in two crystal forms
Descriptor: 5'-D(*CP*GP*CP*GP*CP*A)-3', 5'-D(*TP*GP*CP*GP*CP*G)-3', COBALT HEXAMMINE(III)
Authors:Thiyagarajan, S, Rajan, S.S, Gautham, N.
Deposit date:2004-08-25
Release date:2004-11-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Cobalt hexammine induced tautomeric shift in Z-DNA: the structure of d(CGCGCA)*d(TGCGCG) in two crystal forms.
Nucleic Acids Res., 32, 2004
3NX6
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BU of 3nx6 by Molmil
Crystal Structure of co-chaperonin, GroES (Xoo4289) from Xanthomonas oryzae pv. oryzae KACC10331
Descriptor: 10kDa chaperonin
Authors:Natarajan, S, Doan, T.T.N, Kang, L.-W.
Deposit date:2010-07-13
Release date:2010-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal Structure of co-chaperonin, GroES (Xoo4289) from Xanthomonas oryzae pv. oryzae KACC10331
to be published
3FK5
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BU of 3fk5 by Molmil
Crystal structure of 3-oxoacyl-(acyl carrier protein) synthase III, FabH (Xoo4209) from Xanthomonas oryzae pv. oryzae KACC10331
Descriptor: 3-oxoacyl-synthase III
Authors:Natarajan, S, Huynh, K.-H, Kang, L.W.
Deposit date:2008-12-16
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of 3-oxoacyl-(acyl carrier protein) synthase III, FabH (Xoo4209) from Xanthomonas oryzae pv. oryzae KACC10331
To be Published
3JRU
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BU of 3jru by Molmil
Crystal structure of Leucyl Aminopeptidase (pepA) from Xoo0834,Xanthomonas oryzae pv. oryzae KACC10331
Descriptor: CALCIUM ION, CARBONATE ION, Probable cytosol aminopeptidase, ...
Authors:Natarajan, S, Huynh, K.-H, Kang, L.W.
Deposit date:2009-09-08
Release date:2010-09-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Leucyl Aminopeptidase (pepA) from Xoo0834,Xanthomonas oryzae pv. oryzae KACC10331
to be published
1MZU
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BU of 1mzu by Molmil
Crystal Structure of the Photoactive Yellow Protein Domain from the Sensor Histidine Kinase Ppr from Rhodospirillum centenum
Descriptor: 4'-HYDROXYCINNAMIC ACID, PPR
Authors:Rajagopal, S, Moffat, K.
Deposit date:2002-10-09
Release date:2003-02-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of a Photoactive Yellow Protein from a Sensor Histidine Kinase: Conformational Variability and Signal Transduction
Proc.Natl.Acad.Sci.USA, 100, 2003
2H7H
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BU of 2h7h by Molmil
Crystal structure of the JUN BZIP homodimer complexed with AP-1 DNA
Descriptor: 5'-D(*CP*GP*TP*CP*GP*AP*TP*GP*AP*CP*TP*CP*AP*TP*CP*GP*AP*CP*G)-3', 5'-D(*CP*GP*TP*CP*GP*AP*TP*GP*AP*GP*TP*CP*AP*TP*CP*GP*AP*CP*G)-3', Viral jun transforming protein
Authors:Rajan, S.S, Borovilos, M, Cuff, M.E, Kim, Y.
Deposit date:2006-06-02
Release date:2007-06-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the JUN BZIP homodimer complexed with AP-1 DNA
To be Published
5D75
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BU of 5d75 by Molmil
Crystal structure of Human FKBD25 in complex with FK506
Descriptor: 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN, O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500), Peptidyl-prolyl cis-trans isomerase FKBP3
Authors:Rajan, S, Prakash, A, Yoon, H.S.
Deposit date:2015-08-13
Release date:2016-04-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of the FK506 binding domain of human FKBP25 in complex with FK506.
Protein Sci., 25, 2016
3K89
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Structure of X. oryzae pv. oryzae KACC10331, Xoo0880(fabD) complexed with glycerol
Descriptor: GLYCEROL, Malonyl CoA-ACP transacylase
Authors:Natarajan, S, Jung, J.W, Kang, L.W.
Deposit date:2009-10-14
Release date:2009-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of X. oryzae pv. oryzae KACC10331, Xoo0880(fabD) complexed with glycerol
To be published
3L03
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BU of 3l03 by Molmil
Crystal Structure of human Estrogen Receptor alpha Ligand-Binding Domain in complex with a Glucocorticoid Receptor Interacting Protein 1 Nr Box II peptide and Estetrol (Estra-1,3,5(10)-triene-3,15 alpha,16alpha,17beta-tetrol)
Descriptor: (14beta,15alpha,16alpha,17alpha)-estra-1,3,5(10)-triene-3,15,16,17-tetrol, CHLORIDE ION, Estrogen receptor, ...
Authors:Rajan, S.S, Kim, Y, Vanek, K, Joachimiak, A, Greene, G.L.
Deposit date:2009-12-09
Release date:2010-12-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.896 Å)
Cite:Crystal Structure of human Estrogen Receptor alpha Ligand-Binding Domain in complex with a Glucocorticoid Receptor Interacting Protein 1 Nr Box II peptide and Estra-1,3,5(10)-triene-3,15 alpha,16alpha,17beta-tetrol
To be Published
3R97
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BU of 3r97 by Molmil
Crystal structure of malonyl-CoA:acyl carrier protein transacylase (FabD), Xoo0880, from Xanthomonas oryzae pv. oryzae KACC10331
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Malonyl CoA-ACP transacylase
Authors:Natarajan, S, Jung, J.W, Kang, L.W.
Deposit date:2011-03-25
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of malonyl-CoA:acyl carrier protein transacylase (FabD), Xoo0880, from Xanthomonas oryzae pv. oryzae KACC10331
To be Published
4MGV
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BU of 4mgv by Molmil
Crystal structure of FK506 binding domain of plasmodium VIVAX FKBP35 In complex with inhibitor D5
Descriptor: 70 kDa peptidylprolyl isomerase, putative, N'-(1-adamantylcarbonyl)pyridine-4-carbohydrazide
Authors:Rajan, S, Harikishore, A, Yoon, H.S.
Deposit date:2013-08-29
Release date:2013-12-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Adamantyl derivative as a potent inhibitor of Plasmodium FK506 binding protein 35.
Acs Med.Chem.Lett., 4, 2013
3HLV
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BU of 3hlv by Molmil
Crystal structure of human Estrogen Receptor Alpha Ligand-Binding Domain in complex with a Glucocorticoid Receptor Interacting Protein 1 Nr Box II Peptide and 16-alpha-hydroxy-estrone ((8S,9R,13S,14R,16R)-3,16-dihydroxy-13-methyl-7,8,9,11,12,14,15, 16-octahydro-6H-cyclopenta[a]phenanthren-17-one
Descriptor: (9beta,13alpha,16beta)-3,16-dihydroxyestra-1,3,5(10)-trien-17-one, Estrogen receptor, Nuclear receptor coactivator 2
Authors:Rajan, S.S, Kim, Y, Vanek, K, Joachimiak, A, Greene, G.L.
Deposit date:2009-05-28
Release date:2010-06-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of human alphaER-LBD in complex with GRIP peptide and 16alpha-hydroxyestrone
To be Published
3HM1
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BU of 3hm1 by Molmil
Crystal structure of human Estrogen Receptor Alpha Ligand-Binding Domain in complex with a Glucocorticoid Receptor Interacting Protein 1 Nr Box II Peptide and estrone ((8R,9S,13S,14S)-3-hydroxy-13-methyl-7,8,9,11,12,14,15,16-octahydro-6H-cyclopenta[a]phenanthren-17-one)
Descriptor: (9beta,13alpha)-3-hydroxyestra-1,3,5(10)-trien-17-one, Estrogen receptor, Nuclear receptor coactivator 2
Authors:Rajan, S.S, Kim, Y, Vanek, K, Liwanag, M, Joachimiak, A, Greene, G.L.
Deposit date:2009-05-28
Release date:2010-06-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structure of human Estrogen Receptor Alpha Ligand-Binding Domain in complex with a Glucocorticoid Receptor Interacting Protein 1 Nr Box II Peptide and estrone ((8R,9S,13S,14S)-3-hydroxy-13-methyl-7,8,9,11,12,14,15, 16-octahydro-6H-cyclopenta[a]phenanthren-17-one)
To be Published
2NZ7
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BU of 2nz7 by Molmil
Crystal Structure Analysis of Caspase-recruitment Domain (CARD) of Nod1
Descriptor: Caspase recruitment domain-containing protein 4
Authors:Thiagarajan, S, Robbins, S.L, Dubas, R.L, Park, Y.C.
Deposit date:2006-11-22
Release date:2007-12-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Monomer/dimer transition of the caspase-recruitment domain of human Nod1
Biochemistry, 47, 2008
1RXQ
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BU of 1rxq by Molmil
YfiT from Bacillus subtilis is a probable metal-dependent hydrolase with an unusual four-helix bundle topology
Descriptor: ALANINE, GLUTAMIC ACID, GLYCINE, ...
Authors:Rajan, S.S, Yang, X, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-12-18
Release date:2004-07-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:YfiT from Bacillus subtilis Is a Probable Metal-Dependent Hydrolase with an Unusual Four-Helix Bundle Topology
Biochemistry, 43, 2004
3Q95
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BU of 3q95 by Molmil
Crystal structure of human estrogen receptor alpha LBD in complex with GRIP peptide and estriol
Descriptor: CHLORIDE ION, ESTRIOL, Estrogen receptor, ...
Authors:Rajan, S.S, Kim, Y, Vanek, K, Joachimiak, A, Greene, G.L.
Deposit date:2011-01-07
Release date:2012-01-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of human estrogen receptor alpha LBD in complex with GRIP peptide and Estriol
TO BE PUBLISHED
2B1Z
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BU of 2b1z by Molmil
Human estrogen receptor alpha ligand-binding domain in complex with 17methyl-17alpha-dihydroequilenin and a glucoc interacting protein 1 NR box II peptide
Descriptor: 17-METHYL-17-ALPHA-DIHYDROEQUILENIN, Estrogen receptor, Nuclear receptor coactivator 2
Authors:Rajan, S.S, Hsieh, R.W, Sharma, S.K, Greene, G.L.
Deposit date:2005-09-16
Release date:2006-09-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Molecular characterization of a B-ring unsaturated estrogen: implications for conjugated equine estrogen components of premarin.
Steroids, 73, 2008
2B23
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BU of 2b23 by Molmil
Human estrogen receptor alpha ligand-binding domain and a glucocorticoid receptor-interacting protein 1 NR box II peptide
Descriptor: Estrogen receptor, Nuclear receptor coactivator 2
Authors:Rajan, S.S, Hsieh, R.W, Sharma, S.K, Greene, G.L.
Deposit date:2005-09-16
Release date:2006-09-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:NFkappaB selectivity of estrogen receptor ligands revealed by comparative crystallographic analyses
Nat.Chem.Biol., 4, 2008
2B1V
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BU of 2b1v by Molmil
Human estrogen receptor alpha ligand-binding domain in complex with OBCP-1M and a glucocorticoid receptor interacting protein 1 NR box II peptide
Descriptor: 4-[(1S,2S,5S)-5-(HYDROXYMETHYL)-8-METHYL-3-OXABICYCLO[3.3.1]NON-7-EN-2-YL]PHENOL, Estrogen receptor, Nuclear receptor coactivator 2
Authors:Rajan, S.S, Hsieh, R.W, Sharma, S.K, Greene, G.L.
Deposit date:2005-09-16
Release date:2006-05-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of ligands with bicyclic scaffolds provides insights into mechanisms of estrogen receptor subtype selectivity.
J.Biol.Chem., 281, 2006
2FAI
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Human Estrogen Receptor Alpha Ligand-Binding Domain In Complex With OBCP-2M and A Glucocorticoid Receptor Interacting Protein 1 NR Box II Peptide
Descriptor: 4-[(1S,2S,5S,9R)-5-(HYDROXYMETHYL)-8,9-DIMETHYL-3-OXABICYCLO[3.3.1]NON-7-EN-2-YL]PHENOL, Estrogen receptor, Nuclear receptor coactivator 2
Authors:Rajan, S.S, Hsieh, R.W, Sharma, S.K, Greene, G.L.
Deposit date:2005-12-07
Release date:2006-05-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of ligands with bicyclic scaffolds provides insights into mechanisms of estrogen receptor subtype selectivity.
J.Biol.Chem., 281, 2006

 

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