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PDB: 27265 results

6Z3Y
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BU of 6z3y by Molmil
CryoEM structure of horse sodium/proton exchanger NHE9 in an inward-facing conformation
Descriptor: Sodium/hydrogen exchanger
Authors:Winkelmannm, I, Matsuoka, R, Meier, P, Drew, D.
Deposit date:2020-05-22
Release date:2020-11-04
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.51 Å)
Cite:Structure and elevator mechanism of the mammalian sodium/proton exchanger NHE9.
Embo J., 39, 2020
6YYI
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BU of 6yyi by Molmil
Crystal structure of beta-D-xylosidase from Dictyoglomus thermophilum bound to beta-D-xylopyranose
Descriptor: 1,2-ETHANEDIOL, Beta-xylosidase, CITRIC ACID, ...
Authors:Lafite, P, Daniellou, R, Bretagne, D.
Deposit date:2020-05-05
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Crystal structure of Dictyoglomus thermophilum beta-d-xylosidase DtXyl unravels the structural determinants for efficient notoginsenoside R1 hydrolysis.
Biochimie, 181, 2020
6Z86
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BU of 6z86 by Molmil
human GTP cyclohydrolase I in complex with 7-deaza-GTP
Descriptor: 7-deaza-GTP, GTP cyclohydrolase 1, ZINC ION
Authors:Ebenhoch, R, Nar, H.
Deposit date:2020-06-02
Release date:2020-12-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.206 Å)
Cite:A hybrid approach reveals the allosteric regulation of GTP cyclohydrolase I.
Proc.Natl.Acad.Sci.USA, 117, 2020
5NLB
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BU of 5nlb by Molmil
Crystal structure of human CUL3 N-terminal domain bound to KEAP1 BTB and 3-box
Descriptor: Cullin-3, Kelch-like ECH-associated protein 1
Authors:Adamson, R, Krojer, T, Pinkas, D.M, Bartual, S.G, Burgess-Brown, N.A, Borkowska, O, Chalk, R, Newman, J.A, Kopec, J, Dixon-Clarke, S.E, Mathea, S, Sethi, R, Velupillai, S, Mackinnon, S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.
Deposit date:2017-04-04
Release date:2017-04-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Structural and biochemical characterization establishes a detailed understanding of KEAP1-CUL3 complex assembly.
Free Radic Biol Med, 204, 2023
7QA1
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BU of 7qa1 by Molmil
The structure of natural crystals of the Lysinibacillus sphaericus Tpp49Aa1 pesticidal protein elucidated using serial femtosecond crystallography at an X-ray free electron laser
Descriptor: Toxin-10 pesticidal protein (Tpp) 49Aa1
Authors:Williamson, L.J, Rizkallah, P.J, Berry, C, Oberthur, D, Galchenkova, M, Yefanov, O, Bean, R, Best, H.L.
Deposit date:2021-11-15
Release date:2023-05-17
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the Lysinibacillus sphaericus Tpp49Aa1 pesticidal protein elucidated from natural crystals using MHz-SFX.
Proc.Natl.Acad.Sci.USA, 120, 2023
6Z88
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BU of 6z88 by Molmil
human GTP cyclohydrolase I in complex with allosteric inhibitor
Descriptor: 5-azanyl-[1,3]thiazolo[5,4-d]pyrimidine-2,7-dione, GTP cyclohydrolase 1, ZINC ION
Authors:Ebenhoch, R, Nar, H.
Deposit date:2020-06-02
Release date:2020-12-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.687 Å)
Cite:A hybrid approach reveals the allosteric regulation of GTP cyclohydrolase I.
Proc.Natl.Acad.Sci.USA, 117, 2020
6Z89
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BU of 6z89 by Molmil
human GTP cyclohydrolase I in complex with allosteric inhibitor
Descriptor: 5-azanyl-[1,3]thiazolo[5,4-d]pyrimidine-2,7-dione, GTP cyclohydrolase 1, ZINC ION
Authors:Ebenhoch, R, Nar, H.
Deposit date:2020-06-02
Release date:2020-12-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.366 Å)
Cite:A hybrid approach reveals the allosteric regulation of GTP cyclohydrolase I.
Proc.Natl.Acad.Sci.USA, 117, 2020
6YYH
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BU of 6yyh by Molmil
Crystal structure of beta-D-xylosidase from Dictyoglomus thermophilum in ligand-free form
Descriptor: 1,2-ETHANEDIOL, Beta-xylosidase, CITRIC ACID, ...
Authors:Lafite, P, Daniellou, R, Bretagne, D.
Deposit date:2020-05-05
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Crystal structure of Dictyoglomus thermophilum beta-d-xylosidase DtXyl unravels the structural determinants for efficient notoginsenoside R1 hydrolysis.
Biochimie, 181, 2020
5MX2
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BU of 5mx2 by Molmil
Photosystem II depleted of the Mn4CaO5 cluster at 2.55 A resolution
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Zhang, M, Bommer, M, Chatterjee, R, Hussain, R, Kern, J, Yano, J, Dau, H, Dobbek, H, Zouni, A.
Deposit date:2017-01-20
Release date:2017-08-02
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:Structural insights into the light-driven auto-assembly process of the water-oxidizing Mn4CaO5-cluster in photosystem II.
Elife, 6, 2017
4YNN
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BU of 4ynn by Molmil
Structure of Legionella pneumophila DegQ (S190A variant)
Descriptor: Hepta-peptide, Hexa-peptide, Octapeptide, ...
Authors:Wrase, R, Hilgenfeld, R, Hansen, G.
Deposit date:2015-03-10
Release date:2015-06-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structures of DegQ from Legionella pneumophila Define Distinct ON and OFF States.
J.Mol.Biol., 427, 2015
8API
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BU of 8api by Molmil
THE S VARIANT OF HUMAN ALPHA1-ANTITRYPSIN, STRUCTURE AND IMPLICATIONS FOR FUNCTION AND METABOLISM
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-1 ANTITRYPSIN (CHAIN A), ...
Authors:Loebermann, H, Tokuoka, R, Deisenhofer, J, Huber, R.
Deposit date:1988-09-08
Release date:1990-10-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The S variant of human alpha 1-antitrypsin, structure and implications for function and metabolism.
Protein Eng., 2, 1989
4WOE
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BU of 4woe by Molmil
The duplicated taurocyamine kinase from Schistosoma mansoni with bound transition state analog (TSA) components
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NITRATE ION, ...
Authors:Merceron, R, Awama, A, Montserret, R, Marcillat, O, Gouet, P.
Deposit date:2014-10-15
Release date:2015-04-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Substrate-free and -bound Crystal Structures of the Duplicated Taurocyamine Kinase from the Human Parasite Schistosoma mansoni.
J.Biol.Chem., 290, 2015
5N7O
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BU of 5n7o by Molmil
EthR2 in complex with SMARt-420 compound
Descriptor: 4,4,4-trifluoro-1-(3-phenyl-1-oxa-2,8-diazaspiro[4.5]dec-2-en-8-yl)butan-1-one, Probable transcriptional regulatory protein
Authors:Wohlkonig, A, Wintjens, R.
Deposit date:2017-02-21
Release date:2017-04-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of the interaction between spiroisoxazoline SMARt-420 and the Mycobacterium tuberculosis repressor EthR2.
Biochem. Biophys. Res. Commun., 487, 2017
5D70
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BU of 5d70 by Molmil
Crystal structure of MOR03929, a neutralizing anti-human GM-CSF antibody Fab fragment in complex with human GM-CSF
Descriptor: Granulocyte-macrophage colony-stimulating factor, Immunglobulin G1 Fab fragment, heavy chain, ...
Authors:Eylenstein, R, Weinfurtner, D, Steidl, S, Boettcher, J, Augustin, M.
Deposit date:2015-08-13
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Molecular basis of in vitro affinity maturation and functional evolution of a neutralizing anti-human GM-CSF antibody.
Mabs, 8, 2016
5D7S
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BU of 5d7s by Molmil
Crystal structure of MOR04357, a neutralizing anti-human GM-CSF antibody Fab fragment
Descriptor: (2S,3S)-butane-2,3-diol, Immunglobulin G1 Fab fragment, heavy chain, ...
Authors:Eylenstein, R, Weinfurtner, D, Steidl, S, Boettcher, J, Augustin, M.
Deposit date:2015-08-14
Release date:2015-10-14
Last modified:2016-01-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Molecular basis of in vitro affinity maturation and functional evolution of a neutralizing anti-human GM-CSF antibody.
Mabs, 8, 2016
6XOJ
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BU of 6xoj by Molmil
ScoE with the CABA substrate bound and alpha-ketoglutarate in an off-site
Descriptor: (3~{R})-3-(2-hydroxy-2-oxoethylamino)butanoic acid, 2-OXOGLUTARIC ACID, ACETATE ION, ...
Authors:Jonnalagadda, R, Drennan, C.L.
Deposit date:2020-07-07
Release date:2021-01-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Biochemical and crystallographic investigations into isonitrile formation by a nonheme iron-dependent oxidase/decarboxylase.
J.Biol.Chem., 296, 2021
6XO3
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BU of 6xo3 by Molmil
ScoE with alpha-ketoglutarate in an off-site
Descriptor: 2-OXOGLUTARIC ACID, CHLORIDE ION, FE (II) ION, ...
Authors:Jonnalagadda, R, Drennan, C.L.
Deposit date:2020-07-06
Release date:2021-01-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Biochemical and crystallographic investigations into isonitrile formation by a nonheme iron-dependent oxidase/decarboxylase.
J.Biol.Chem., 296, 2021
5YOK
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BU of 5yok by Molmil
Structure of HIV-1 Protease in Complex with Inhibitor KNI-1657
Descriptor: (4R)-N-[(2,6-dimethylphenyl)methyl]-3-[(2S,3S)-3-[[(2S)-2-[(7-methoxy-1-benzofuran-2-yl)carbonylamino]-2-[(3R)-oxolan-3 -yl]ethanoyl]amino]-2-oxidanyl-4-phenyl-butanoyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxamide, GLYCEROL, HIV-1 PROTEASE
Authors:Adachi, M, Hidaka, K, Kuroki, R, Kiso, Y.
Deposit date:2017-10-29
Release date:2018-07-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Identification of Highly Potent Human Immunodeficiency Virus Type-1 Protease Inhibitors against Lopinavir and Darunavir Resistant Viruses from Allophenylnorstatine-Based Peptidomimetics with P2 Tetrahydrofuranylglycine.
J. Med. Chem., 61, 2018
4Y0I
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BU of 4y0i by Molmil
GABA-aminotransferase inactivated by conformationally-restricted inactivator
Descriptor: 4-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]THIOPHENE-2-CARBOXYLIC ACID, 4-aminobutyrate aminotransferase, mitochondrial, ...
Authors:Wu, R, Sanishvili, R, Lee, H.V, Dustin, D.H, Emma, D, Neil, K, Silverman, R.B, Liu, D.
Deposit date:2015-02-06
Release date:2016-02-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.662 Å)
Cite:GABA-aminotransferase inactivated by conformationally-restricted inactivator
To Be Published
6Z80
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BU of 6z80 by Molmil
stimulatory human GTP cyclohydrolase I - GFRP complex
Descriptor: 8-OXO-GUANOSINE-5'-TRIPHOSPHATE, GTP cyclohydrolase 1, GTP cyclohydrolase 1 feedback regulatory protein, ...
Authors:Ebenhoch, R, Nar, H, Vonck, J.
Deposit date:2020-06-02
Release date:2020-12-09
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A hybrid approach reveals the allosteric regulation of GTP cyclohydrolase I.
Proc.Natl.Acad.Sci.USA, 117, 2020
5YOZ
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BU of 5yoz by Molmil
Solution structure of truncated Rab5a from Leishmania donovani
Descriptor: Rab5a
Authors:Maheshwari, D, Yadav, R, Mukhopadhyay, A, Arora, A.
Deposit date:2017-10-31
Release date:2018-10-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Biophysical Characterization of Rab5a from Leishmania Donovani
Biophys. J., 115, 2018
5Z47
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BU of 5z47 by Molmil
Crystal structure of pyrrolidone carboxylate peptidase I with disordered loop A from Deinococcus radiodurans R1
Descriptor: DIMETHYL SULFOXIDE, Pyrrolidone-carboxylate peptidase
Authors:Agrawal, R, Kumar, A, Kumar, A, Makde, R.D.
Deposit date:2018-01-10
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of pyrrolidone-carboxylate peptidase I from Deinococcus radiodurans reveal the mechanism of L-pyroglutamate recognition.
Acta Crystallogr D Struct Biol, 75, 2019
5D72
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BU of 5d72 by Molmil
Crystal structure of MOR04252, a neutralizing anti-human GM-CSF antibody Fab fragment in complex with human GM-CSF
Descriptor: DI(HYDROXYETHYL)ETHER, Granulocyte-macrophage colony-stimulating factor, Immunglobulin G1 Fab fragment, ...
Authors:Eylenstein, R, Weinfurtner, D, Steidl, S, Boettcher, J, Augustin, M.
Deposit date:2015-08-13
Release date:2015-10-14
Last modified:2016-01-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular basis of in vitro affinity maturation and functional evolution of a neutralizing anti-human GM-CSF antibody.
Mabs, 8, 2016
6Z87
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BU of 6z87 by Molmil
human GTP cyclohydrolase I
Descriptor: GTP cyclohydrolase 1, ZINC ION
Authors:Ebenhoch, R, Nar, H.
Deposit date:2020-06-02
Release date:2020-12-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.564 Å)
Cite:A hybrid approach reveals the allosteric regulation of GTP cyclohydrolase I.
Proc.Natl.Acad.Sci.USA, 117, 2020
1L1M
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BU of 1l1m by Molmil
SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1
Descriptor: 5'-D(*AP*AP*AP*TP*TP*GP*TP*TP*AP*TP*CP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*TP*C)-3', 5'-D(*GP*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*GP*GP*AP*TP*AP*AP*CP*AP*AP*TP*TP*T)-3', Lactose operon repressor
Authors:Kalodimos, C.G, Bonvin, A.M.J.J, Salinas, R.K, Wechselberger, R, Boelens, R, Kaptein, R.
Deposit date:2002-02-19
Release date:2002-06-26
Last modified:2021-10-27
Method:SOLUTION NMR
Cite:Plasticity in protein-DNA recognition: lac repressor interacts with its natural operator 01 through alternative conformations of its DNA-binding domain.
EMBO J., 21, 2002

223790

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