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PDB: 93 results

7S0P
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Crystal structure of Porcine Factor VIII C2 Domain Bound to Phosphatidylserine
Descriptor: Coagulation factor VIII, PHOSPHOSERINE
Authors:Peters, S.C, Childers, K.C, Wo, S.W, Brison, C.M, Swanson, C.D, Spiegel, P.C.
Deposit date:2021-08-30
Release date:2021-10-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Stable binding to phosphatidylserine-containing membranes requires conserved arginine residues in tandem C domains of blood coagulation factor VIII.
Front Mol Biosci, 9, 2022
7K66
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Structure of Blood Coagulation Factor VIII in Complex with an Anti-C1 Domain Pathogenic Antibody Inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2A9 heavy chain, ...
Authors:Childers, K.C, Gish, J, Jarvis, L, Peters, S, Garrels, C, Smith, I.W, Spencer, H.T, Spiegel, P.C.
Deposit date:2020-09-18
Release date:2020-10-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.92 Å)
Cite:Structure of blood coagulation factor VIII in complex with an anti-C1 domain pathogenic antibody inhibitor.
Blood, 137, 2021
7KBT
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Factor VIII in complex with the anti-C2 domain antibody, G99
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Ronayne, E.K, Gish, J, Wilson, C, Peters, S, Spencer, H.T, Spiegel, P.C, Childers, K.C.
Deposit date:2020-10-02
Release date:2020-11-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (4.15 Å)
Cite:Structure of Blood Coagulation Factor VIII in Complex With an Anti-C2 Domain Non-Classical, Pathogenic Antibody Inhibitor
Front Immunol, 12, 2021
3T32
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Crystal structure of a putative C-S lyase from Bacillus anthracis
Descriptor: Aminotransferase, class I/II
Authors:Anderson, S.M, Wawrzak, Z, Gordon, E, Peterson, S.N, Porebski, P, Minor, W, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-07-24
Release date:2011-08-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a putative C-S lyase from Bacillus anthracis
TO BE PUBLISHED
3SS6
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Crystal structure of the Bacillus anthracis acetyl-CoA acetyltransferase
Descriptor: Acetyl-CoA acetyltransferase, POTASSIUM ION, SULFATE ION
Authors:Anderson, S.M, Wawrzak, Z, Onopriyenko, O, Peterson, S.N, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-07-07
Release date:2011-07-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the Bacillus anthracis acetyl-CoA acetyltransferase
TO BE PUBLISHED
4E1L
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Crystal structure of Acetoacetyl-CoA thiolase (thlA2) from Clostridium difficile
Descriptor: Acetoacetyl-CoA thiolase 2, IODIDE ION
Authors:Anderson, S.M, Wawrzak, Z, Kudritska, M, Peterson, S.N, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-03-06
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:

4E4Y
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The crystal structure of a short chain dehydrogenase family protein from Francisella tularensis subsp. tularensis SCHU S4
Descriptor: GLYCEROL, SULFATE ION, Short chain dehydrogenase family protein
Authors:Zhang, R, Zhou, M, Tan, K, Peterson, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-03-13
Release date:2012-03-28
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:The crystal structure of a short chain dehydrogenase family protein from Francisella tularensis subsp. tularensis SCHU S4
To be Published
4RQ9
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Crystal structure of the chromophore-binding domain of Stigmatella aurantiaca bacteriophytochrome (Thr289His mutant) in the Pr state
Descriptor: 1,2-ETHANEDIOL, BILIVERDINE IX ALPHA, GLYCEROL, ...
Authors:Woitowich, N.C, Halavaty, A.S, Gallagher, K.D, Nugent, A.C, Patel, H, Duong, P, Kovaleva, S.E, St.Peter, S, Ozarowski, W.B, Hernandez, C.N, Stojkovic, E.A.
Deposit date:2014-10-31
Release date:2016-05-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the chromophore-binding domain of Stigmatella aurantiaca bacteriophytochrome (Thr289His mutant) in the Pr state
To be Published
6DE8
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BU of 6de8 by Molmil
Crystal Structure of Bifunctional Enzyme FolD-Methylenetetrahydrofolate Dehydrogenase/Cyclohydrolase from Campylobacter jejuni
Descriptor: Bifunctional protein FolD, CHLORIDE ION, GLYCEROL, ...
Authors:Kim, Y, Makowska-Grzyska, M, Zhang, R, Peterson, S.N, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-05-11
Release date:2018-05-30
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Crystal Structure of Bifunctional Enzyme FolD-Methylenetetrahydrofolate Dehydrogenase/Cyclohydrolase from Campylobacter jejuni
To Be Published
8DYV
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BU of 8dyv by Molmil
Structure of human cytoplasmic dynein-1 bound to one Lis1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1, ...
Authors:Reimer, J.M, DeSantis, M, Reck-Peterson, S.L, Leschziner, A.E.
Deposit date:2022-08-05
Release date:2023-02-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:Structures of human dynein in complex with the lissencephaly 1 protein, LIS1.
Elife, 12, 2023
8DYU
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Structure of human cytoplasmic dynein-1 bound to two Lis1 proteins
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1, ...
Authors:Reimer, J.M, DeSantis, M, Reck-Peterson, S.L, Leschziner, A.E.
Deposit date:2022-08-05
Release date:2023-02-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structures of human dynein in complex with the lissencephaly 1 protein, LIS1.
Elife, 12, 2023
6TQA
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BU of 6tqa by Molmil
X-ray structure of Roquin ROQ domain in complex with a UCP3 CDE2 SL RNA motif
Descriptor: CHLORIDE ION, MAGNESIUM ION, RNA (5'-R(P*GP*GP*UP*GP*CP*CP*UP*AP*AP*UP*AP*UP*UP*UP*AP*GP*GP*CP*AP*CP*(CCC))-3'), ...
Authors:Binas, O, Tants, J.-N, Peter, S.A, Janowski, R, Davydova, E, Braun, J, Niessing, D, Schwalbe, H, Weigand, J.E, Schlundt, A.
Deposit date:2019-12-16
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the recognition of transiently structured AU-rich elements by Roquin.
Nucleic Acids Res., 48, 2020
6TQB
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X-ray structure of Roquin ROQ domain in complex with a UCP3 CDE1 SL RNA motif
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Binas, O, Tants, J.-N, Peter, S.A, Janowski, R, Davydova, E, Braun, J, Niessing, D, Schwalbe, H, Weigand, J.E, Schlundt, A.
Deposit date:2019-12-16
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for the recognition of transiently structured AU-rich elements by Roquin.
Nucleic Acids Res., 48, 2020
3J1T
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BU of 3j1t by Molmil
High affinity dynein microtubule binding domain - tubulin complex
Descriptor: Cytoplasmic dynein 1 heavy chain 1, seryl t-RNA synthetase chimera, Tubulin alpha-1B chain, ...
Authors:Redwine, W.B, Hernandez-Lopez, R, Zou, S, Huang, J, Reck-Peterson, S.L, Leschziner, A.E.
Deposit date:2012-06-25
Release date:2012-09-26
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.7 Å)
Cite:Structural basis for microtubule binding and release by dynein.
Science, 337, 2012
3J1U
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BU of 3j1u by Molmil
Low affinity dynein microtubule binding domain - tubulin complex
Descriptor: Cytoplasmic dynein 1 heavy chain 1, seryl t-RNA synthetase chimera, Tubulin alpha-1B chain, ...
Authors:Redwine, W.B, Hernandez-Lopez, R, Zou, S, Huang, J, Reck-Peterson, S.L, Leschziner, A.E.
Deposit date:2012-06-25
Release date:2012-09-26
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.7 Å)
Cite:Structural basis for microtubule binding and release by dynein.
Science, 337, 2012
5VH9
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BU of 5vh9 by Molmil
Cryo-EM structure of yeast cytoplasmic dynein-1 with Lis1 and ATP
Descriptor: Dynein heavy chain, cytoplasmic, Nuclear distribution protein PAC1
Authors:Cianfrocco, M.A, DeSantis, M.E, Htet, Z.M, Tran, P.T, Reck-Peterson, S.L, Leschziner, A.E.
Deposit date:2017-04-12
Release date:2017-09-06
Last modified:2020-01-01
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Lis1 Has Two Opposing Modes of Regulating Cytoplasmic Dynein.
Cell, 170, 2017
5VLJ
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BU of 5vlj by Molmil
Cryo-EM structure of yeast cytoplasmic dynein with Walker B mutation at AAA3 in presence of ATP-VO4
Descriptor: Dynein heavy chain, cytoplasmic, Nuclear distribution protein PAC1
Authors:Cianfrocco, M.A, DeSantis, M.E, Htet, Z.M, Tran, P.T, Reck-Peterson, S.L, Leschziner, A.E.
Deposit date:2017-04-25
Release date:2017-09-06
Last modified:2020-01-01
Method:ELECTRON MICROSCOPY (10.5 Å)
Cite:Lis1 Has Two Opposing Modes of Regulating Cytoplasmic Dynein.
Cell, 170, 2017
5HPO
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Cycloalternan-forming enzyme from Listeria monocytogenes in complex with maltopentaose
Descriptor: CALCIUM ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Halavaty, A.S, Light, S.H, Minasov, G, Winsor, J, Grimshaw, S, Shuvalova, L, Peterson, S, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-01-20
Release date:2017-01-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Transferase Versus Hydrolase: The Role of Conformational Flexibility in Reaction Specificity.
Structure, 25, 2017
5HXM
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BU of 5hxm by Molmil
Cycloalternan-forming enzyme from Listeria monocytogenes in complex with panose
Descriptor: Alpha-xylosidase, CALCIUM ION, CHLORIDE ION, ...
Authors:Halavaty, A.S, Light, S.H, Minasov, G, Winsor, J, Grimshaw, S, Shuvalova, L, Peterson, S, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-01-31
Release date:2017-01-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Transferase Versus Hydrolase: The Role of Conformational Flexibility in Reaction Specificity.
Structure, 25, 2017
3N4K
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Putative RNA methyltransferase from Yersinia pestis in complex with S-ADENOSYL-L-HOMOCYSTEINE.
Descriptor: RNA methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Osipiuk, J, Maltseva, N, Peterson, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-05-21
Release date:2010-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:X-ray crystal structure of putative RNA methyltransferase from Yersinia pestis.
To be Published
2MSX
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BU of 2msx by Molmil
The solution structure of the MANEC-type domain from Hepatocyte Growth Factor Inhibitor 1 reveals an unexpected PAN/apple domain-type fold
Descriptor: Kunitz-type protease inhibitor 1
Authors:Hong, Z, Nowakowski, M.E, Spronk, C, Petersen, S.V, Petersen, J.S, Kozminski, W, Mulder, F, Jensen, J.K.
Deposit date:2014-08-09
Release date:2014-12-31
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The solution structure of the MANEC-type domain from hepatocyte growth factor activator inhibitor-1 reveals an unexpected PAN/apple domain-type fold.
Biochem.J., 466, 2015
3LDV
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BU of 3ldv by Molmil
1.77 Angstrom resolution crystal structure of orotidine 5'-phosphate decarboxylase from Vibrio cholerae O1 biovar eltor str. N16961
Descriptor: CHLORIDE ION, MAGNESIUM ION, Orotidine 5'-phosphate decarboxylase
Authors:Halavaty, A.S, Shuvalova, L, Minasov, G, Dubrovska, I, Winsor, J, Glass, E.M, Peterson, S.N, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-01-13
Release date:2010-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:1.77 Angstrom resolution crystal structure of orotidine 5'-phosphate decarboxylase from Vibrio cholerae O1 biovar eltor str. N16961
To be Published
3LXM
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2.00 Angstrom resolution crystal structure of a catalytic subunit of an aspartate carbamoyltransferase (pyrB) from Yersinia pestis CO92
Descriptor: Aspartate carbamoyltransferase, TETRAETHYLENE GLYCOL
Authors:Halavaty, A.S, Minasov, G, Dubrovska, I, Winsor, J, Shuvalova, L, Peterson, S, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-02-25
Release date:2010-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:2.00 Angstrom resolution crystal structure of a catalytic subunit of an aspartate carbamoyltransferase (pyrB) from Yersinia pestis CO92
To be Published
4MPY
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BU of 4mpy by Molmil
1.85 Angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betB) from Staphylococcus aureus (IDP00699) in complex with NAD+
Descriptor: Betaine aldehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION
Authors:Halavaty, A.S, Minasov, G, Shuvalova, L, Winsor, J, Peterson, S.N, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-09-14
Release date:2013-10-09
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure-based mutational studies of substrate inhibition of betaine aldehyde dehydrogenase BetB from Staphylococcus aureus.
Appl.Environ.Microbiol., 80, 2014
3N4J
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Putative RNA methyltransferase from Yersinia pestis
Descriptor: RNA methyltransferase, SULFATE ION
Authors:Osipiuk, J, Maltseva, N, Peterson, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-05-21
Release date:2010-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:X-ray crystal structure of putative RNA methyltransferase from Yersinia pestis.
To be Published

 

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