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PDB: 84 results

1EPA
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BU of 1epa by Molmil
STRUCTURE OF THE EPIDIDYMAL RETINOIC ACID-BINDING PROTEIN AT 2.1 ANGSTROMS RESOLUTION
Descriptor: EPIDIDYMAL RETINOIC ACID-BINDING PROTEIN
Authors:Newcomer, M.E.
Deposit date:1993-06-15
Release date:1994-07-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the epididymal retinoic acid binding protein at 2.1 A resolution.
Structure, 1, 1993
1EPB
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BU of 1epb by Molmil
STRUCTURE OF THE EPIDIDYMAL RETINOIC ACID-BINDING PROTEIN AT 2.1 ANGSTROMS RESOLUTION
Descriptor: (9cis)-retinoic acid, EPIDIDYMAL RETINOIC ACID-BINDING PROTEIN
Authors:Newcomer, M.E.
Deposit date:1993-06-15
Release date:1994-07-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the epididymal retinoic acid binding protein at 2.1 A resolution.
Structure, 1, 1993
3O8Y
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BU of 3o8y by Molmil
Stable-5-Lipoxygenase
Descriptor: Arachidonate 5-lipoxygenase, FE (II) ION
Authors:Newcomer, M.E, Gilbert, N.C, Bartlett, S.G, Waight, M.T, Neau, D.B, Boeglin, W.E, Brash, A.R.
Deposit date:2010-08-03
Release date:2011-01-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.389 Å)
Cite:The structure of human 5-lipoxygenase.
Science, 331, 2011
7LAF
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BU of 7laf by Molmil
15-lipoxygenase-2 loop mutant bound to imidazole-based inhibitor
Descriptor: 3-{[(4-methylphenyl)methyl]sulfanyl}-1-phenyl-1H-1,2,4-triazole, MANGANESE (II) ION, Polyunsaturated fatty acid lipoxygenase ALOX15B
Authors:Newcomer, M.E, Gilbert, N.C, Neau, D.B.
Deposit date:2021-01-06
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Kinetic and structural investigations of novel inhibitors of human epithelial 15-lipoxygenase-2.
Bioorg.Med.Chem., 46, 2021
1BI9
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BU of 1bi9 by Molmil
RETINAL DEHYDROGENASE TYPE TWO WITH NAD BOUND
Descriptor: CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, RETINAL DEHYDROGENASE TYPE II
Authors:Newcomer, M.E, Lamb, A.L.
Deposit date:1998-06-23
Release date:1999-07-22
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structure of retinal dehydrogenase type II at 2.7 A resolution: implications for retinal specificity.
Biochemistry, 38, 1999
6N2W
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BU of 6n2w by Molmil
The structure of Stable-5-Lipoxygenase bound to NDGA
Descriptor: 4-[(2R,3S)-3-[(3,4-DIHYDROXYPHENYL)METHYL]-2-METHYLBUTYL]BENZENE-1,2-DIOL, Arachidonate 5-lipoxygenase, FE (II) ION
Authors:Newcomer, M.E, Gilbert, N.C, Neau, D.B.
Deposit date:2018-11-14
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structural and mechanistic insights into 5-lipoxygenase inhibition by natural products.
Nat.Chem.Biol., 16, 2020
6NCF
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BU of 6ncf by Molmil
The structure of Stable-5-Lipoxygenase bound to AKBA
Descriptor: (3alpha,8alpha,17alpha,18alpha)-3-(acetyloxy)-11-oxours-12-en-23-oic acid, Arachidonate 5-lipoxygenase, FE (II) ION
Authors:Newcomer, M.E, Gilbert, N.C, Neau, D.B.
Deposit date:2018-12-11
Release date:2020-05-13
Last modified:2020-07-08
Method:X-RAY DIFFRACTION (2.871 Å)
Cite:Structural and mechanistic insights into 5-lipoxygenase inhibition by natural products.
Nat.Chem.Biol., 16, 2020
4P9S
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BU of 4p9s by Molmil
Crystal structure of the mature form of rat DMGDH
Descriptor: Dimethylglycine dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Luka, Z, Pakhomova, S, Loukachevitch, L.V, Newcomer, M.E, Wagner, C.
Deposit date:2014-04-04
Release date:2014-06-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Folate in demethylation: The crystal structure of the rat dimethylglycine dehydrogenase complexed with tetrahydrofolate.
Biochem.Biophys.Res.Commun., 449, 2014
3V99
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S663D Stable-5-LOX in complex with Arachidonic Acid
Descriptor: ARACHIDONIC ACID, Arachidonate 5-lipoxygenase, FE (II) ION
Authors:Gilbert, N.C, Rui, Z, Neau, D.B, Waight, M, Bartlett, S.G, Boeglin, W.E, Brash, A.R, Newcomer, M.E.
Deposit date:2011-12-23
Release date:2012-05-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.252 Å)
Cite:Conversion of human 5-lipoxygenase to a 15-lipoxygenase by a point mutation to mimic phosphorylation at Serine-663.
Faseb J., 26, 2012
3V92
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S663A Stable-5-LOX
Descriptor: Arachidonate 5-lipoxygenase, FE (II) ION
Authors:Gilbert, N.C, Rui, Z, Neau, D.B, Waight, M, Bartlett, S.G, Boeglin, W.E, Brash, A.R, Newcomer, M.E.
Deposit date:2011-12-23
Release date:2012-05-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Conversion of human 5-lipoxygenase to a 15-lipoxygenase by a point mutation to mimic phosphorylation at Serine-663.
Faseb J., 26, 2012
3V98
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S663D Stable-5-LOX
Descriptor: Arachidonate 5-lipoxygenase, FE (II) ION
Authors:Gilbert, N.C, Rui, Z, Neau, D.B, Waight, M, Bartlett, S.G, Boeglin, W.E, Brash, A.R, Newcomer, M.E.
Deposit date:2011-12-23
Release date:2012-05-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Conversion of human 5-lipoxygenase to a 15-lipoxygenase by a point mutation to mimic phosphorylation at Serine-663.
Faseb J., 26, 2012
5DD8
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BU of 5dd8 by Molmil
The Crystal structure of HucR mutant (HucR-E48Q) from Deinococcus radiodurans
Descriptor: CHLORIDE ION, Transcriptional regulator, MarR family
Authors:Deochand, D.K, Perera, I.C, Crochet, R.B, Gilbert, N.C, Newcomer, M.E, Grove, A.
Deposit date:2015-08-24
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Histidine switch controlling pH-dependent protein folding and DNA binding in a transcription factor at the core of synthetic network devices.
Mol Biosyst, 12, 2016
4QWT
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BU of 4qwt by Molmil
Anaerobic crystal structure of delta413-417:GS LOX in complex with arachidonate
Descriptor: ACETATE ION, ARACHIDONIC ACID, Allene oxide synthase-lipoxygenase protein, ...
Authors:Neau, D.B, Newcomer, M.E.
Deposit date:2014-07-17
Release date:2014-09-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal Structure of a Lipoxygenase in Complex with Substrate: THE ARACHIDONIC ACID-BINDING SITE OF 8R-LIPOXYGENASE.
J.Biol.Chem., 289, 2014
1FMJ
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BU of 1fmj by Molmil
CRYSTAL STRUCTURE OF MERCURY DERIVATIVE OF RETINOL DEHYDRATASE IN A COMPLEX WITH RETINOL AND PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, CALCIUM ION, MERCURY (II) ION, ...
Authors:Pakhomova, S, Kobayashi, M, Buck, J, Newcomer, M.E.
Deposit date:2000-08-17
Release date:2001-05-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:A helical lid converts a sulfotransferase to a dehydratase.
Nat.Struct.Biol., 8, 2001
1FML
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BU of 1fml by Molmil
CRYSTAL STRUCTURE OF RETINOL DEHYDRATASE IN A COMPLEX WITH RETINOL AND PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, CALCIUM ION, RETINOL, ...
Authors:Pakhomova, S, Kobayashi, M, Buck, J, Newcomer, M.E.
Deposit date:2000-08-17
Release date:2001-05-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A helical lid converts a sulfotransferase to a dehydratase.
Nat.Struct.Biol., 8, 2001
1X8J
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BU of 1x8j by Molmil
Crystal structure of retinol dehydratase in complex with androsterone and inactive cofactor PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, Androsterone, CALCIUM ION, ...
Authors:Pakhomova, S, Buck, J, Newcomer, M.E.
Deposit date:2004-08-18
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The structures of the unique sulfotransferase retinol dehydratase with product and inhibitors provide insight into enzyme mechanism and inhibition.
Protein Sci., 14, 2005
1X8L
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BU of 1x8l by Molmil
Crystal structure of retinol dehydratase in complex with all-trans-4-oxoretinol and inactive cofactor PAP
Descriptor: 4-OXORETINOL, ADENOSINE-3'-5'-DIPHOSPHATE, CALCIUM ION, ...
Authors:Pakhomova, S, Buck, J, Newcomer, M.E.
Deposit date:2004-08-18
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structures of the unique sulfotransferase retinol dehydratase with product and inhibitors provide insight into enzyme mechanism and inhibition.
Protein Sci., 14, 2005
1X8K
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BU of 1x8k by Molmil
Crystal structure of retinol dehydratase in complex with anhydroretinol and inactive cofactor PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, ANHYDRORETINOL, CALCIUM ION, ...
Authors:Pakhomova, S, Buck, J, Newcomer, M.E.
Deposit date:2004-08-18
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The structures of the unique sulfotransferase retinol dehydratase with product and inhibitors provide insight into enzyme mechanism and inhibition.
Protein Sci., 14, 2005
2AZT
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BU of 2azt by Molmil
Crystal structure of H176N mutant of human Glycine N-Methyltransferase
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, CITRIC ACID, ...
Authors:Luka, Z, Pakhomova, S, Luka, Y, Newcomer, M.E, Wagner, C.
Deposit date:2005-09-12
Release date:2006-09-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Destabilization of human glycine N-methyltransferase by H176N mutation.
Protein Sci., 16, 2007
2BAY
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BU of 2bay by Molmil
Crystal structure of the Prp19 U-box dimer
Descriptor: Pre-mRNA splicing factor PRP19
Authors:Vander Kooi, C.W, Ohi, M.D, Rosenberg, J.A, Oldham, M.L, Newcomer, M.E, Gould, K.L, Chazin, W.J.
Deposit date:2005-10-15
Release date:2006-01-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Prp19 U-box Crystal Structure Suggests a Common Dimeric Architecture for a Class of Oligomeric E3 Ubiquitin Ligases.
Biochemistry, 45, 2006
2FBK
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BU of 2fbk by Molmil
The Crystal Structure of HucR from Deinococcus radiodurans
Descriptor: CHLORIDE ION, transcriptional regulator, MarR family
Authors:Bordelon, T, Wilkinson, S.P, Grove, A, Newcomer, M.E.
Deposit date:2005-12-09
Release date:2006-07-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Crystal Structure of the Transcriptional Regulator HucR from Deinococcus radiodurans Reveals a Repressor Preconfigured for DNA Binding.
J.Mol.Biol., 360, 2006
2FNQ
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BU of 2fnq by Molmil
Insights from the X-ray crystal structure of coral 8R-lipoxygenase: calcium activation via A C2-like domain and a structural basis of product chirality
Descriptor: Allene oxide synthase-lipoxygenase protein, CALCIUM ION, FE (II) ION
Authors:Oldham, M.L, Brash, A.R, Newcomer, M.E.
Deposit date:2006-01-11
Release date:2006-02-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Insights from the X-ray crystal structure of coral 8R-lipoxygenase: calcium activation via a C2-like domain and a structural basis of product chirality.
J.Biol.Chem., 280, 2005
5UYT
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BU of 5uyt by Molmil
Crystal structure of ice binding protein from an Antarctic bacterium Flavobacteriaceae
Descriptor: Ice-binding protein, NITRATE ION
Authors:Wang, C, Pakhomova, S, Newcomer, M.E, Christner, B.C, Luo, B.-H.
Deposit date:2017-02-24
Release date:2017-10-25
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis of antifreeze activity of a bacterial multi-domain antifreeze protein.
PLoS ONE, 12, 2017
6AUM
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BU of 6aum by Molmil
Crystal structure of human soluble epoxide hydrolase complexed with trans-4-[4-(3-trifluoromethoxyphenyl-l-ureido)-cyclohexyloxy]-benzoic acid.
Descriptor: 4-{[trans-4-({[4-(trifluoromethoxy)phenyl]carbamoyl}amino)cyclohexyl]oxy}benzoic acid, Bifunctional epoxide hydrolase 2, CHLORIDE ION, ...
Authors:Kodani, S.D, Bahkta, S, Hwang, S.H, Pakhomova, S, Newcomer, M.E, Morisseau, C, Hammock, B.
Deposit date:2017-09-01
Release date:2018-02-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Identification and optimization of soluble epoxide hydrolase inhibitors with dual potency towards fatty acid amide hydrolase.
Bioorg. Med. Chem. Lett., 28, 2018
2IDK
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BU of 2idk by Molmil
Crystal Structure of Rat Glycine N-Methyltransferase Complexed With Folate
Descriptor: 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID, Glycine N-methyltransferase
Authors:Luka, Z, Pakhomova, S, Loukachevitch, L.V, Egli, M, Newcomer, M.E, Wagner, C.
Deposit date:2006-09-15
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:5-methyltetrahydrofolate is bound in intersubunit areas of rat liver folate-binding protein glycine N-methyltransferase.
J.Biol.Chem., 282, 2007

 

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