1UE8
| Crystal Structure of Thermophilic Cytochrome P450 from Sulfolobus tokodaii | 分子名称: | 367aa long hypothetical cytochrome P450, CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Nakamura, N, Kamitori, S, Ohno, H. | 登録日 | 2003-05-09 | 公開日 | 2004-07-13 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Structure and direct electrochemistry of cytochrome P450 from the thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain 7 J.Inorg.Biochem., 98, 2004
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1U7L
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1TQP
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1UF2
| The Atomic Structure of Rice dwarf Virus (RDV) | 分子名称: | Core protein P3, Outer capsid protein P8, Structural protein P7 | 著者 | Nakagawa, A, Miyazaki, N, Taka, J, Naitow, H, Ogawa, A, Fujimoto, Z, Mizuno, H, Higashi, T, Watanabe, Y, Omura, T, Cheng, R.H, Tsukihara, T. | 登録日 | 2003-05-23 | 公開日 | 2003-10-14 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (3.5 Å) | 主引用文献 | The atomic structure of rice dwarf virus reveals the self-assembly mechanism of component proteins. Structure, 11, 2003
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1U6G
| Crystal Structure of The Cand1-Cul1-Roc1 Complex | 分子名称: | Cullin homolog 1, RING-box protein 1, TIP120 protein, ... | 著者 | Goldenberg, S.J, Shumway, S.D, Cascio, T.C, Garbutt, K.C, Liu, J, Xiong, Y, Zheng, N. | 登録日 | 2004-07-29 | 公開日 | 2004-12-14 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (3.1 Å) | 主引用文献 | Structure of the Cand1-Cul1-Roc1 complex reveals regulatory mechanisms for the assembly of the multisubunit cullin-dependent ubiquitin ligases Cell(Cambridge,Mass.), 119, 2004
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1UF9
| Crystal structure of TT1252 from Thermus thermophilus | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, TT1252 protein | 著者 | Seto, A, Murayama, K, Toyama, M, Ebihara, A, Nakagawa, N, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2003-05-28 | 公開日 | 2003-11-28 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | ATP-induced structural change of dephosphocoenzyme A kinase from Thermus thermophilus HB8 PROTEINS, 58, 2005
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1U5K
| Recombinational repair protein RecO | 分子名称: | ZINC ION, hypothetical protein | 著者 | Makharashvili, N, Koroleva, O, Bera, S, Grandgenett, D.P, Korolev, S. | 登録日 | 2004-07-27 | 公開日 | 2004-10-26 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | A Novel Structure of DNA Repair Protein RecO from Deinococcus radiodurans STRUCTURE, 12, 2004
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1U6V
| NMR structure of a V3 (IIIB isolate) peptide bound to 447-52D, a human HIV-1 neutralizing antibody | 分子名称: | V3 peptide | 著者 | Rosen, O, Chill, J, Sharon, M, Kessler, N, Mester, B, Zolla-Pazner, S, Anglister, J. | 登録日 | 2004-08-02 | 公開日 | 2005-04-05 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Induced fit in HIV-neutralizing antibody complexes: evidence for alternative conformations of the gp120 V3 loop and the molecular basis for broad neutralization. Biochemistry, 44, 2005
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2L90
| Solution structure of murine myristoylated msrA | 分子名称: | MYRISTIC ACID, Peptide methionine sulfoxide reductase | 著者 | Gruschus, J.M, Lim, J, Piszczek, G, Levine, R.L, Tjandra, N. | 登録日 | 2011-01-27 | 公開日 | 2012-01-11 | 最終更新日 | 2012-08-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Characterization and solution structure of mouse myristoylated methionine sulfoxide reductase A. J.Biol.Chem., 287, 2012
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2MQI
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4XAY
| Cycles of destabilization and repair underlie evolutionary transitions in enzymes | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, CACODYLATE ION, Phosphotriesterase variant PTE-R8, ... | 著者 | Jackson, C.J, Campbell, E, Kaltenbach, M, Tokuriki, N. | 登録日 | 2014-12-16 | 公開日 | 2015-12-16 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.84 Å) | 主引用文献 | The role of protein dynamics in the evolution of new enzyme function. Nat.Chem.Biol., 12, 2016
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8ILV
| Cryo-EM structure of PI3Kalpha in complex with compound 18 | 分子名称: | N-[(2R)-1-(ethylamino)-1-oxidanylidene-3-[3-(2-quinoxalin-6-ylethynyl)phenyl]propan-2-yl]-2,3-dimethyl-quinoxaline-6-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform | 著者 | Zhou, Q, Liu, X, Neri, D, Li, W, Favalli, N, Bassi, G, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W. | 登録日 | 2023-03-04 | 公開日 | 2023-09-06 | 実験手法 | ELECTRON MICROSCOPY (3.19 Å) | 主引用文献 | Structural insights into the interaction of three Y-shaped ligands with PI3K alpha. Proc.Natl.Acad.Sci.USA, 120, 2023
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6ER4
| Ruminococcus gnavus IT-sialidase CBM40 bound to alpha2,6 sialyllactose | 分子名称: | BNR/Asp-box repeat protein, GLYCEROL, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, ... | 著者 | Owen, C.D, Tailford, L.E, Taylor, G.L, Juge, N. | 登録日 | 2017-10-16 | 公開日 | 2018-05-02 | 最終更新日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | Unravelling the specificity and mechanism of sialic acid recognition by the gut symbiont Ruminococcus gnavus. Nat Commun, 8, 2017
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4XHA
| Crystal structure of Thosea asigna virus RNA-dependent RNA polymerase (RdRP) complexed with Lu3+ | 分子名称: | GLYCEROL, LUTETIUM (III) ION, RNA-dependent RNA polymerase, ... | 著者 | Ferrero, D.S, Buxaderas, M, Rodriguez, J.F, Verdaguer, N. | 登録日 | 2015-01-05 | 公開日 | 2015-11-04 | 最終更新日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | The Structure of the RNA-Dependent RNA Polymerase of a Permutotetravirus Suggests a Link between Primer-Dependent and Primer-Independent Polymerases. Plos Pathog., 11, 2015
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4XIG
| Crystal structure of bacterial alginate ABC transporter determined through humid air and glue-coating method | 分子名称: | 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, AlgM1, AlgM2, ... | 著者 | Kaneko, A, Maruyama, Y, Mizuno, N, Baba, S, Kumasaka, T, Mikami, B, Murata, K, Hashimoto, W. | 登録日 | 2015-01-07 | 公開日 | 2016-01-13 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (3.402 Å) | 主引用文献 | A solute-binding protein in the closed conformation induces ATP hydrolysis in a bacterial ATP-binding cassette transporter involved in the import of alginate. J.Biol.Chem., 292, 2017
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8I7P
| Crystal structure of Ricin A chain bound with N2-(2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)glycyl-L-tyrosine | 分子名称: | 6-(2-ethyl-4-hydroxyphenyl)-1H-indazole-3-carboxamide, Ricin A chain, SULFATE ION | 著者 | Goto, M, Sakamoto, N, Higashi, S, Kawata, R, Nagatsu, K, Saito, R. | 登録日 | 2023-02-01 | 公開日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Crystal structure of ricin toxin A chain complexed with a highly potent pterin-based small-molecular inhibitor. J Enzyme Inhib Med Chem, 38, 2023
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2YTG
| Solution structure of the C2H2 type zinc finger (region 369-401) of human Zinc finger protein 95 homolog | 分子名称: | ZINC ION, Zinc finger protein 95 homolog | 著者 | Tomizawa, T, Tochio, N, Abe, H, Saito, K, Li, H, Sato, M, Koshiba, S, Kobayashi, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2007-04-05 | 公開日 | 2007-10-09 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the C2H2 type zinc finger (region 369-401) of human Zinc finger protein 95 homolog To be Published
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2YTP
| Solution structure of the C2H2 type zinc finger (region 687-719) of human Zinc finger protein 484 | 分子名称: | ZINC ION, Zinc finger protein 484 | 著者 | Tochio, N, Tomizawa, T, Abe, H, Saito, K, Li, H, Sato, M, Koshiba, S, Kobayashi, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2007-04-05 | 公開日 | 2007-10-09 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the C2H2 type zinc finger (region 687-719) of human Zinc finger protein 484 To be Published
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4XBD
| 1.45A resolution structure of Norovirus 3CL protease complex with a covalently bound dipeptidyl inhibitor (1R,2S)-2-({N-[(benzyloxy)carbonyl]-3-cyclohexyl-L-alanyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid (Orthorhombic P Form) | 分子名称: | (1R,2S)-2-({N-[(benzyloxy)carbonyl]-3-cyclohexyl-L-alanyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-LIKE PROTEASE | 著者 | Lovell, S, Battaile, K.P, Mehzabeen, N, Kankanamalage, A.C.G, Kim, Y, Weerawarna, P.M, Uy, R.A.Z, Damalanka, V.C, Mandadapu, S.R, Alliston, K.R, Groutas, W.C, Chang, K.-O. | 登録日 | 2014-12-16 | 公開日 | 2015-03-25 | 最終更新日 | 2017-11-22 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | Structure-Guided Design and Optimization of Dipeptidyl Inhibitors of Norovirus 3CL Protease. Structure-Activity Relationships and Biochemical, X-ray Crystallographic, Cell-Based, and In Vivo Studies. J.Med.Chem., 58, 2015
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6EE2
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8ILS
| Cryo-EM structure of PI3Kalpha in complex with compound 17 | 分子名称: | N-[(2R)-1-(ethylamino)-1-oxidanylidene-3-[4-(2-quinoxalin-6-ylethynyl)phenyl]propan-2-yl]-2,3-dimethyl-quinoxaline-6-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform | 著者 | Zhou, Q, Liu, X, Neri, D, Li, W, Favalli, N, Bassi, G, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W. | 登録日 | 2023-03-04 | 公開日 | 2023-09-13 | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | 主引用文献 | Structural insights into the interaction of three Y-shaped ligands with PI3K alpha. Proc.Natl.Acad.Sci.USA, 120, 2023
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6E8G
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1V6F
| Solution Structure of Glia Maturation Factor-beta from Mus Musculus | 分子名称: | glia maturation factor, beta | 著者 | Goroncy, A.K, Kigawa, T, Koshiba, S, Tomizawa, T, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2003-11-29 | 公開日 | 2004-05-29 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | NMR solution structures of actin depolymerizing factor homology domains. Protein Sci., 18, 2009
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7PD9
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7PJX
| Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP) | 分子名称: | 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... | 著者 | Petrychenko, V, Peng, B.Z, Schwarzer, A.C, Peske, F, Rodnina, M.V, Fischer, N. | 登録日 | 2021-08-24 | 公開日 | 2021-10-20 | 最終更新日 | 2024-04-24 | 実験手法 | ELECTRON MICROSCOPY (6.5 Å) | 主引用文献 | Structural mechanism of GTPase-powered ribosome-tRNA movement. Nat Commun, 12, 2021
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