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PDB: 12 results

1M1C
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BU of 1m1c by Molmil
Structure of the L-A virus
Descriptor: Major coat protein
Authors:Naitow, H, Tang, J, Canady, M, Wickner, R.B, Johnson, J.E.
Deposit date:2002-06-18
Release date:2002-10-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:L-A virus at 3.4 A resolution reveals particle architecture and mRNA decapping mechanism.
Nat.Struct.Biol., 9, 2002
7CHK
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Cryo-EM Structure of Apple Latent Spherical Virus (ALSV)
Descriptor: VP20 protein, VP24 protein, VP25 protein
Authors:Naitow, H, Hamaguchi, T, Maki-Yonekura, S, Isogai, M, Yoshikawa, N, Yonekura, K.
Deposit date:2020-07-06
Release date:2020-11-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Apple latent spherical virus structure with stable capsid frame supports quasi-stable protrusions expediting genome release.
Commun Biol, 3, 2020
1UF2
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The Atomic Structure of Rice dwarf Virus (RDV)
Descriptor: Core protein P3, Outer capsid protein P8, Structural protein P7
Authors:Nakagawa, A, Miyazaki, N, Taka, J, Naitow, H, Ogawa, A, Fujimoto, Z, Mizuno, H, Higashi, T, Watanabe, Y, Omura, T, Cheng, R.H, Tsukihara, T.
Deposit date:2003-05-23
Release date:2003-10-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The atomic structure of rice dwarf virus reveals the self-assembly mechanism of component proteins.
Structure, 11, 2003
5ZGO
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Crystal structure of APRT2 from Thermus thermophilus HB8
Descriptor: Adenine phosphoribosyltransferase
Authors:Kunishima, N, Naitow, H, Matsuura, Y.
Deposit date:2018-03-09
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional characterization of thermostable biocatalysts for the synthesis of 6-aminopurine nucleoside-5'-monophospate analogues.
Bioresour. Technol., 276, 2019
5GUA
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Structure of biotin carboxyl carrier protein from pyrococcus horikoshi OT3 (delta N79) A138Y mutant
Descriptor: 149aa long hypothetical methylmalonyl-CoA decarboxylase gamma chain
Authors:Yamada, K, Kunishima, N, Matsuura, Y, Nakai, K, Naitow, H, Fukasawa, Y, Tomii, K.
Deposit date:2016-08-26
Release date:2017-08-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Designing better diffracting crystals of biotin carboxyl carrier protein from Pyrococcus horikoshii by a mutation based on the crystal-packing propensity of amino acids.
Acta Crystallogr D Struct Biol, 73, 2017
5GU9
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Structure of biotin carboxyl carrier protein from pyrococcus horikoshi OT3 (delta N79) A138I mutant
Descriptor: 149aa long hypothetical methylmalonyl-CoA decarboxylase gamma chain
Authors:Yamada, K, Kunishima, N, Matsuura, Y, Nakai, K, Naitow, H, Fukasawa, Y, Tomii, K.
Deposit date:2016-08-26
Release date:2017-08-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Designing better diffracting crystals of biotin carboxyl carrier protein from Pyrococcus horikoshii by a mutation based on the crystal-packing propensity of amino acids.
Acta Crystallogr D Struct Biol, 73, 2017
5GU8
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Structure of biotin carboxyl carrier protein from pyrococcus horikoshi OT3 (delta N79) wild type
Descriptor: 149aa long hypothetical methylmalonyl-CoA decarboxylase gamma chain, SODIUM ION
Authors:Yamada, K, Kunishima, N, Matsuura, Y, Nakai, K, Naitow, H, Fukasawa, Y, Tomii, K.
Deposit date:2016-08-26
Release date:2017-08-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Designing better diffracting crystals of biotin carboxyl carrier protein from Pyrococcus horikoshii by a mutation based on the crystal-packing propensity of amino acids.
Acta Crystallogr D Struct Biol, 73, 2017
5WR2
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Thermolysin, SFX liganded form with oil-based carrier
Descriptor: CALCIUM ION, N-[(benzyloxy)carbonyl]-L-aspartic acid, Thermolysin, ...
Authors:Kunishima, N, Naitow, H, Matsuura, Y.
Deposit date:2016-11-29
Release date:2017-08-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Protein-ligand complex structure from serial femtosecond crystallography using soaked thermolysin microcrystals and comparison with structures from synchrotron radiation
Acta Crystallogr D Struct Biol, 73, 2017
5WR5
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Thermolysin, liganded form with cryo condition 1
Descriptor: CALCIUM ION, N-[(benzyloxy)carbonyl]-L-aspartic acid, TETRAETHYLENE GLYCOL, ...
Authors:Kunishima, N, Naitow, H, Matsuura, Y.
Deposit date:2016-11-29
Release date:2017-08-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein-ligand complex structure from serial femtosecond crystallography using soaked thermolysin microcrystals and comparison with structures from synchrotron radiation
Acta Crystallogr D Struct Biol, 73, 2017
5WR3
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Thermolysin, SFX liganded form with water-based carrier
Descriptor: CALCIUM ION, N-[(benzyloxy)carbonyl]-L-aspartic acid, Thermolysin, ...
Authors:Kunishima, N, Naitow, H, Matsuura, Y.
Deposit date:2016-11-29
Release date:2017-08-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Protein-ligand complex structure from serial femtosecond crystallography using soaked thermolysin microcrystals and comparison with structures from synchrotron radiation
Acta Crystallogr D Struct Biol, 73, 2017
5WR6
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BU of 5wr6 by Molmil
Thermolysin, liganded form with cryo condition 2
Descriptor: CALCIUM ION, N-[(benzyloxy)carbonyl]-L-aspartic acid, Thermolysin, ...
Authors:Kunishima, N, Naitow, H, Matsuura, Y.
Deposit date:2016-11-29
Release date:2017-08-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Protein-ligand complex structure from serial femtosecond crystallography using soaked thermolysin microcrystals and comparison with structures from synchrotron radiation
Acta Crystallogr D Struct Biol, 73, 2017
5WR4
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BU of 5wr4 by Molmil
Thermolysin, SFX unliganded form with oil-based carrier
Descriptor: CALCIUM ION, Thermolysin, ZINC ION
Authors:Kunishima, N, Naitow, H, Matsuura, Y.
Deposit date:2016-11-29
Release date:2017-08-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Protein-ligand complex structure from serial femtosecond crystallography using soaked thermolysin microcrystals and comparison with structures from synchrotron radiation
Acta Crystallogr D Struct Biol, 73, 2017

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