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PDB: 89 results

4TV7
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BU of 4tv7 by Molmil
Crystal structure of Bacillus subtilis GabR at 2.05 Angstroms resolution
Descriptor: HTH-type transcriptional regulatory protein GabR
Authors:Goto, M, Okuda, K, Yoshimura, T.
Deposit date:2014-06-26
Release date:2014-12-24
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Role of the aminotransferase domain in Bacillus subtilis GabR, a pyridoxal 5'-phosphate-dependent transcriptional regulator
Mol. Microbiol., 95, 2015
8I7P
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BU of 8i7p by Molmil
Crystal structure of Ricin A chain bound with N2-(2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)glycyl-L-tyrosine
Descriptor: 6-(2-ethyl-4-hydroxyphenyl)-1H-indazole-3-carboxamide, Ricin A chain, SULFATE ION
Authors:Goto, M, Sakamoto, N, Higashi, S, Kawata, R, Nagatsu, K, Saito, R.
Deposit date:2023-02-01
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of ricin toxin A chain complexed with a highly potent pterin-based small-molecular inhibitor.
J Enzyme Inhib Med Chem, 38, 2023
5AVO
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BU of 5avo by Molmil
Crystal structure of the reduced form of homoserine dehydrogenase from Sulfolobus tokodaii.
Descriptor: Homoserine dehydrogenase
Authors:Goto, M, Yoshimune, K, Kaneko, R.
Deposit date:2015-06-25
Release date:2015-11-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insight into activation of homoserine dehydrogenase from the archaeonSulfolobus tokodaiivia reduction.
Biochem Biophys Rep, 3, 2015
5X9D
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BU of 5x9d by Molmil
Crystal structure of homoserine dehydrogenase in complex with L-cysteine and NAD
Descriptor: (2R)-3-[[(4S)-3-aminocarbonyl-1-[(2R,3R,4S,5R)-5-[[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-3,4-bis(oxidanyl)oxolan-2-yl]-4H-pyridin-4-yl]sulfanyl]-2-azanyl-propanoic acid, Homoserine dehydrogenase, L(+)-TARTARIC ACID
Authors:Goto, M, Ogata, K, Kaneko, R, Yoshimune, K.
Deposit date:2017-03-06
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inhibition of homoserine dehydrogenase by formation of a cysteine-NAD covalent complex
Sci Rep, 8, 2018
6LUT
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Crystal structure of Serine Racemase from Dictyostelium discoideum.
Descriptor: Probable serine racemase
Authors:Goto, M, Mizobuchi, T, Yoshimura, T.
Deposit date:2020-01-31
Release date:2020-12-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Mechanism of eukaryotic serine racemase-catalyzed serine dehydration.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
4YDR
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BU of 4ydr by Molmil
Crystal structure of oxidized homoserine dehydrogenase of Sulfolobus tokodaii
Descriptor: Homoserine dehydrogenase, SODIUM ION
Authors:Goto, M, Yoshimune, K, Kaneko, R.
Deposit date:2015-02-23
Release date:2015-11-11
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insight into activation of homoserine dehydrogenase from the archaeonSulfolobus tokodaiivia reduction.
Biochem Biophys Rep, 3, 2015
1J21
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BU of 1j21 by Molmil
Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with ATP and citrulline
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Argininosuccinate Synthetase, CITRULLINE
Authors:Goto, M, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-24
Release date:2003-04-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of argininosuccinate synthetase in enzyme-ATP-substrates and enzyme-AMP-product forms
J.Biol.Chem., 278, 2003
1J1Z
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BU of 1j1z by Molmil
Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with substrate
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ASPARTIC ACID, Argininosuccinate Synthetase, ...
Authors:Goto, M, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-24
Release date:2003-04-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of argininosuccinate synthetase in enzyme-ATP-substrates and enzyme-AMP-product forms
J.Biol.Chem., 278, 2003
1J20
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BU of 1j20 by Molmil
Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with product
Descriptor: ADENOSINE MONOPHOSPHATE, ARGININOSUCCINATE, Argininosuccinate Synthetase, ...
Authors:Goto, M, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-24
Release date:2003-04-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of argininosuccinate synthetase in enzyme-ATP-substrates and enzyme-AMP-product forms
J.Biol.Chem., 278, 2003
1KH3
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BU of 1kh3 by Molmil
Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with inhibitor
Descriptor: ARGININE, ASPARTIC ACID, Argininosuccinate Synthetase, ...
Authors:goto, m, Hirotsu, k, miyahara, i, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-11-29
Release date:2003-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structures of Argininosuccinate Synthetase in Enzyme-ATP Substrates and Enzyme-AMP Product Forms: STEREOCHEMISTRY OF THE CATALYTIC REACTION
J.Biol.Chem., 278, 2003
2YXZ
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BU of 2yxz by Molmil
Crystal structure of tt0281 from Thermus thermophilus HB8
Descriptor: Thiamin-monophosphate kinase
Authors:Goto, M.
Deposit date:2007-04-27
Release date:2008-04-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of tt0281 from Thermus thermophilus HB8
to be published
1KOR
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BU of 1kor by Molmil
Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with inhibitors
Descriptor: ARGININE, Argininosuccinate Synthetase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Goto, M, Nakajima, Y, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-12-22
Release date:2002-04-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of argininosuccinate synthetase from Thermus thermophilus HB8. Structural basis for the catalytic action.
J.Biol.Chem., 277, 2002
2A1H
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BU of 2a1h by Molmil
X-ray crystal structure of human mitochondrial branched chain aminotransferase (BCATm) complexed with gabapentin
Descriptor: ACETIC ACID, PYRIDOXAL-5'-PHOSPHATE, [1-(AMINOMETHYL)CYCLOHEXYL]ACETIC ACID, ...
Authors:Goto, M, Miyahara, I, Hirotsu, K, Conway, M, Yennawar, N, Islam, M.M, Hutson, S.M.
Deposit date:2005-06-20
Release date:2005-09-06
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural determinants for branched-chain aminotransferase isozyme-specific inhibition by the anticonvulsant drug gabapentin.
J.Biol.Chem., 280, 2005
1KH2
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BU of 1kh2 by Molmil
Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Argininosuccinate Synthetase
Authors:Goto, M, Nakajima, Y, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-11-29
Release date:2002-04-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of argininosuccinate synthetase from Thermus thermophilus HB8. Structural basis for the catalytic action.
J.Biol.Chem., 277, 2002
1KH1
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BU of 1kh1 by Molmil
Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase
Descriptor: Argininosuccinate Synthetase, SULFATE ION
Authors:Goto, M, Nakajima, Y, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-11-29
Release date:2002-04-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of argininosuccinate synthetase from Thermus thermophilus HB8. Structural basis for the catalytic action.
J.Biol.Chem., 277, 2002
2COJ
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BU of 2coj by Molmil
Crystal structure of reduced human cytosolic branched-chain aminotransferase complexed with gabapentin
Descriptor: MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE, [1-(AMINOMETHYL)CYCLOHEXYL]ACETIC ACID, ...
Authors:Goto, M.
Deposit date:2005-05-17
Release date:2005-08-30
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural determinants for branched-chain aminotransferase isozyme-specific inhibition by the anticonvulsant drug gabapentin
J.Biol.Chem., 280, 2005
2COG
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BU of 2cog by Molmil
Crystal structure of oxidized human cytosolic branched-chain aminotransferase complexed with 4-methylvalerate
Descriptor: 4-METHYL VALERIC ACID, MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Goto, M.
Deposit date:2005-05-17
Release date:2005-08-30
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural determinants for branched-chain aminotransferase isozyme-specific inhibition by the anticonvulsant drug gabapentin
J.Biol.Chem., 280, 2005
2COI
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BU of 2coi by Molmil
Crystal structure of oxidized human cytosolic branched-chain aminotransferase complexed with gabapentin
Descriptor: MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE, [1-(AMINOMETHYL)CYCLOHEXYL]ACETIC ACID, ...
Authors:Goto, M.
Deposit date:2005-05-17
Release date:2005-08-30
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural determinants for branched-chain aminotransferase isozyme-specific inhibition by the anticonvulsant drug gabapentin
J.Biol.Chem., 280, 2005
3AB8
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BU of 3ab8 by Molmil
Crystal Structure of the Hypothetical Tandem-type Universal Stress Protein TTHA0350 complexed with ATPs.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Putative uncharacterized protein TTHA0350
Authors:Goto, M, Iino, H, Shimizu, N, Kuramitsu, S.
Deposit date:2009-12-01
Release date:2010-12-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Hypothetical Tandem-type Universal Stress Protein TTHA0350 from Thermus thermophilus HB8
To be Published
3AB7
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BU of 3ab7 by Molmil
Crystal Structure of the Hypothetical Tandem-type Universal Stress Protein TTHA0350 from Thermus thermophilus HB8
Descriptor: Putative uncharacterized protein TTHA0350
Authors:Goto, M, Iino, H, Shimizu, N, Kuramitsu, S.
Deposit date:2009-12-01
Release date:2010-12-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Crystal Structure of the Hypothetical Tandem-type Universal Stress Protein TTHA0350 from Thermus thermophilus HB8
To be Published
1X2A
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BU of 1x2a by Molmil
Crystal Structure of e.coli AspAT complexed with N-phosphopyridoxyl-D-glutamic acid
Descriptor: Aspartate aminotransferase, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-D-GLUTAMIC ACID
Authors:Goto, M.
Deposit date:2005-04-21
Release date:2005-06-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Binding of C5-dicarboxylic substrate to aspartate aminotransferase: implications for the conformational change at the transaldimination step.
Biochemistry, 44, 2005
1X28
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BU of 1x28 by Molmil
Crystal Structure of e.coli AspAT complexed with N-phosphopyridoxyl-L-glutamic acid
Descriptor: Aspartate aminotransferase, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid
Authors:Goto, M.
Deposit date:2005-04-21
Release date:2005-06-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Binding of C5-dicarboxylic substrate to aspartate aminotransferase: implications for the conformational change at the transaldimination step.
Biochemistry, 44, 2005
1X29
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BU of 1x29 by Molmil
Crystal Structure of e.coli AspAT complexed with N-phosphopyridoxyl-2-methyl-L-glutamic acid
Descriptor: Aspartate aminotransferase, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-2-METHYL-L-GLUTAMIC ACID
Authors:Goto, M.
Deposit date:2005-04-21
Release date:2005-06-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Binding of C5-dicarboxylic substrate to aspartate aminotransferase: implications for the conformational change at the transaldimination step.
Biochemistry, 44, 2005
2ZR8
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BU of 2zr8 by Molmil
Crystal Structure of Modified Serine Racemase complexed with Serine
Descriptor: MAGNESIUM ION, N-(5'-PHOSPHOPYRIDOXYL)-D-ALANINE, SERINE, ...
Authors:Goto, M.
Deposit date:2008-08-25
Release date:2009-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a homolog of mammalian serine racemase from Schizosaccharomyces pombe
J.Biol.Chem., 284, 2009
2ZPU
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BU of 2zpu by Molmil
Crystal Structure of Modified Serine Racemase from S.pombe.
Descriptor: MAGNESIUM ION, N-(5'-PHOSPHOPYRIDOXYL)-D-ALANINE, Uncharacterized protein C320.14
Authors:Goto, M.
Deposit date:2008-07-29
Release date:2009-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Serine racemase with catalytically active lysinoalanyl residue.
J.Biochem., 145, 2009

 

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