Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17048 件

6Z9P
DownloadVisualize
BU of 6z9p by Molmil
Transcription termination intermediate complex 1
分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
著者Said, N, Hilal, T, Loll, B, Wahl, M.C.
登録日2020-06-04
公開日2020-11-04
最終更新日2021-02-03
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Steps toward translocation-independent RNA polymerase inactivation by terminator ATPase rho.
Science, 371, 2021
6Z8F
DownloadVisualize
BU of 6z8f by Molmil
Human Picobirnavirus D45-CP VLP
分子名称: Capsid protein precursor
著者Ortega-Esteban, A, Mata, C.P, Rodriguez-Espinosa, M.J, Luque, D, Irigoyen, N, Rodriguez, J.M, de Pablo, P.J, Caston, J.R.
登録日2020-06-02
公開日2020-09-16
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Cryo-electron Microscopy Structure, Assembly, and Mechanics Show Morphogenesis and Evolution of Human Picobirnavirus.
J.Virol., 94, 2020
6ZFN
DownloadVisualize
BU of 6zfn by Molmil
Structure of an inactive E404Q variant of the catalytic domain of human endo-alpha-mannosidase MANEA in complex with 1-methyl alpha-1,2-mannobiose
分子名称: Glycoprotein endo-alpha-1,2-mannosidase, SULFATE ION, alpha-D-mannopyranose-(1-2)-methyl alpha-D-mannopyranoside
著者Sobala, L.F, Fernandes, P.Z, Hakki, Z, Thompson, A.J, Howe, J.D, Hill, M, Zitzmann, N, Davies, S, Stamataki, Z, Butters, T.D, Alonzi, D.S, Williams, S.J, Davies, G.J.
登録日2020-06-17
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structure of human endo-alpha-1,2-mannosidase (MANEA), an antiviral host-glycosylation target.
Proc.Natl.Acad.Sci.USA, 117, 2020
6MUT
DownloadVisualize
BU of 6mut by Molmil
Cryo-EM structure of ternary Csm-crRNA-target RNA with anti-tag sequence complex in type III-A CRISPR-Cas system
分子名称: RNA (5'-R(*GP*UP*GP*GP*AP*AP*AP*GP*GP*CP*GP*GP*GP*CP*AP*GP*AP*GP*GP*C)-3'), RNA (5'-R(P*CP*CP*UP*CP*UP*GP*CP*CP*CP*GP*CP*CP*UP*UP*UP*CP*CP*AP*C)-3'), Uncharacterized protein Csm1, ...
著者Jia, N, Wang, C, Eng, E.T, Patel, D.J.
登録日2018-10-23
公開日2018-12-12
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity.
Mol. Cell, 73, 2019
6Z9H
DownloadVisualize
BU of 6z9h by Molmil
Escherichia coli D-2-deoxyribose-5-phosphate aldolase - C47V/G204A/S239D mutant
分子名称: 1,2-ETHANEDIOL, Deoxyribose-phosphate aldolase, FORMIC ACID, ...
著者Paakkonen, J, Hakulinen, N, Rouvinen, J.
登録日2020-06-04
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Substrate specificity of 2-deoxy-D-ribose 5-phosphate aldolase (DERA) assessed by different protein engineering and machine learning methods.
Appl.Microbiol.Biotechnol., 104, 2020
1F9B
DownloadVisualize
BU of 1f9b by Molmil
MELANIN PROTEIN INTERACTION: X-RAY STRUCTURE OF THE COMPLEX OF MARE LACTOFERRIN WITH MELANIN MONOMERS
分子名称: 3H-INDOLE-5,6-DIOL, BICARBONATE ION, FE (III) ION, ...
著者Kumar, S, Singh, T.P, Sharma, A.K, Singh, N, Raman, G.
登録日2000-07-10
公開日2001-02-10
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Lactoferrin-melanin interaction and its possible implications in melanin polymerization: crystal structure of the complex formed between mare lactoferrin and melanin monomers at 2.7-A resolution.
Proteins, 45, 2001
4ETC
DownloadVisualize
BU of 4etc by Molmil
Lysozyme, room temperature, 24 kGy dose
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Boutet, S, Lomb, L, Williams, G, Barends, T, Aquila, A, Doak, R.B, Weierstall, U, DePonte, D, Steinbrener, J, Shoeman, R, Messerschmidt, M, Barty, A, White, T, Kassemeyer, S, Kirian, R, Seibert, M, Montanez, P, Kenney, C, Herbst, R, Hart, P, Pines, J, Haller, G, Gruner, S, Philllip, H, Tate, M, Hromalik, M, Koerner, L, van Bakel, N, Morse, J, Ghonsalves, W, Arnlund, D, Bogan, M, Calemann, C, Fromme, R, Hampton, C, Hunter, M, Johansson, L, Katona, G, Kupitz, C, Liang, M, Martin, A, Nass, K, Redecke, L, Stellato, F, Timneanu, N, Wang, D, Zatsepin, N, Schafer, D, Defever, K, Neutze, R, Fromme, P, Spence, J, Chapman, H, Schlichting, I.
登録日2012-04-24
公開日2012-06-13
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.906 Å)
主引用文献High-resolution protein structure determination by serial femtosecond crystallography.
Science, 337, 2012
6YSR
DownloadVisualize
BU of 6ysr by Molmil
Structure of the P+9 stalled ribosome complex
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Chan, K.-H, Petrychenko, V, Mueller, C, Maracci, C, Holtkamp, W, Wilson, D.N, Fischer, N, Rodnina, M.V.
登録日2020-04-23
公開日2020-08-19
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Mechanism of ribosome rescue by alternative ribosome-rescue factor B.
Nat Commun, 11, 2020
2VRA
DownloadVisualize
BU of 2vra by Molmil
Drosophila Robo IG1-2 (monoclinic form)
分子名称: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, ROUNDABOUT 1, SULFATE ION
著者Fukuhara, N, Howitt, J.A, Hussain, S, Hohenester, E.
登録日2008-03-28
公開日2008-04-08
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural and Functional Analysis of Slit and Heparin Binding to Immunoglobulin-Like Domains 1 and 2 of Drosophila Robo
J.Biol.Chem., 283, 2008
6YXQ
DownloadVisualize
BU of 6yxq by Molmil
Crystal structure of a DNA repair complex ASCC3-ASCC2
分子名称: Activating signal cointegrator 1 complex subunit 2, Activating signal cointegrator 1 complex subunit 3
著者Jia, J, Absmeier, E, Holton, N, Bohnsack, K.E, Pietrzyk-Brzezinska, A.J, Bohnsack, M.T, Wahl, M.C.
登録日2020-05-03
公開日2020-09-30
最終更新日2020-11-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The interaction of DNA repair factors ASCC2 and ASCC3 is affected by somatic cancer mutations.
Nat Commun, 11, 2020
6MU5
DownloadVisualize
BU of 6mu5 by Molmil
Bst DNA polymerase I TNA/DNA binary complex
分子名称: DNA (5'-D(P*GP*CP*GP*AP*TP*CP*AP*CP*GP*T)-3'), DNA polymerase I, SULFATE ION, ...
著者Jackson, L.N, Chim, N, Chaput, J.C.
登録日2018-10-22
公開日2019-06-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.912 Å)
主引用文献Crystal structures of a natural DNA polymerase that functions as an XNA reverse transcriptase.
Nucleic Acids Res., 47, 2019
1F7Z
DownloadVisualize
BU of 1f7z by Molmil
RAT TRYPSINOGEN K15A COMPLEXED WITH BOVINE PANCREATIC TRYPSIN INHIBITOR
分子名称: CALCIUM ION, PANCREATIC TRYPSIN INHIBITOR, SULFATE ION, ...
著者Pasternak, A, White, A, Jeffery, C.J, Medina, N, Cahoon, M, Ringe, D, Hedstrom, L.
登録日2000-06-28
公開日2001-07-04
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The energetic cost of induced fit catalysis: Crystal structures of trypsinogen mutants with enhanced activity and inhibitor affinity.
Protein Sci., 10, 2001
1F7Y
DownloadVisualize
BU of 1f7y by Molmil
THE CRYSTAL STRUCTURE OF TWO UUCG LOOPS HIGHLIGHTS THE ROLE PLAYED BY 2'-HYDROXYL GROUPS IN ITS UNUSUAL STABILITY
分子名称: 16S RIBOSOMAL RNA FRAGMENT, 30S RIBOSOMAL PROTEIN S15, MAGNESIUM ION, ...
著者Ennifar, E, Nikouline, A, Serganov, A, Tishchenko, S, Nevskaya, N, Garber, M, Ehresmann, B, Ehresmann, C, Nikonov, S, Dumas, P.
登録日2000-06-28
公開日2000-11-22
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The crystal structure of UUCG tetraloop.
J.Mol.Biol., 304, 2000
6MV6
DownloadVisualize
BU of 6mv6 by Molmil
Crystal structure of RNAse 6
分子名称: PHOSPHATE ION, Ribonuclease K6
著者Couture, J.-F, Doucet, N.
登録日2018-10-24
公開日2019-11-13
最終更新日2020-05-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Insights into Structural and Dynamical Changes Experienced by Human RNase 6 upon Ligand Binding.
Biochemistry, 59, 2020
6Z8D
DownloadVisualize
BU of 6z8d by Molmil
Human Picobirnavirus CP VLP
分子名称: Capsid protein precursor
著者Ortega-Esteban, A, Mata, C.P, Rodriguez-Espinosa, M.J, Luque, D, Irigoyen, N, Rodriguez, J.M, de Pablo, P.J, Caston, J.R.
登録日2020-06-02
公開日2020-09-23
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献Cryo-electron Microscopy Structure, Assembly, and Mechanics Show Morphogenesis and Evolution of Human Picobirnavirus.
J.Virol., 94, 2020
6Z9F
DownloadVisualize
BU of 6z9f by Molmil
1.56 A structure of human apoferritin obtained from data subset of Titan Mono-BCOR microscope
分子名称: Ferritin heavy chain, SODIUM ION
著者Yip, K.M, Fischer, N, Paknia, E, Chari, A, Stark, H.
登録日2020-06-03
公開日2020-06-24
最終更新日2021-02-10
実験手法ELECTRON MICROSCOPY (1.56 Å)
主引用文献Atomic-resolution protein structure determination by cryo-EM.
Nature, 587, 2020
6ZCA
DownloadVisualize
BU of 6zca by Molmil
Structure of the B. subtilis RNA POLYMERASE in complex with HelD (monomer)
分子名称: DNA helicase, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Pei, H.-P, Hilal, T, Huang, Y.-H, Said, N, Loll, B, Wahl, M.C.
登録日2020-06-10
公開日2020-10-14
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献The delta subunit and NTPase HelD institute a two-pronged mechanism for RNA polymerase recycling.
Nat Commun, 11, 2020
6MLQ
DownloadVisualize
BU of 6mlq by Molmil
Cryo-EM structure of microtubule-bound Kif7 in the ADP state
分子名称: ADENOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Mani, N, Jiang, S, Wilson-Kubalek, E.M, Ku, P, Milligan, R.A, Subramanian, R.
登録日2018-09-27
公開日2019-05-01
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Interplay between the Kinesin and Tubulin Mechanochemical Cycles Underlies Microtubule Tip Tracking by the Non-motile Ciliary Kinesin Kif7.
Dev.Cell, 49, 2019
2VDC
DownloadVisualize
BU of 2vdc by Molmil
THE 9.5 A RESOLUTION STRUCTURE OF GLUTAMATE SYNTHASE FROM CRYO-ELECTRON MICROSCOPY AND ITS OLIGOMERIZATION BEHAVIOR IN SOLUTION: FUNCTIONAL IMPLICATIONS.
分子名称: 2-OXOGLUTARIC ACID, FE3-S4 CLUSTER, FLAVIN MONONUCLEOTIDE, ...
著者Cottevieille, M, Larquet, E, Jonic, S, Petoukhov, M.V, Caprini, G, Paravisi, S, Svergun, D.I, Vanoni, M.A, Boisset, N.
登録日2007-10-04
公開日2008-01-15
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献The Subnanometer Resolution Structure of the Glutamate Synthase 1.2-Mda Hexamer by Cryoelectron Microscopy and its Oligomerization Behavior in Solution: Functional Implications.
J.Biol.Chem., 283, 2008
1FBY
DownloadVisualize
BU of 1fby by Molmil
CRYSTAL STRUCTURE OF THE HUMAN RXR ALPHA LIGAND BINDING DOMAIN BOUND TO 9-CIS RETINOIC ACID
分子名称: (9cis)-retinoic acid, RETINOIC ACID RECEPTOR RXR-ALPHA
著者Egea, P.F, Mitschler, A, Rochel, N, Ruff, M, Chambon, P, Moras, D.
登録日2000-07-17
公開日2000-07-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of the human RXRalpha ligand-binding domain bound to its natural ligand: 9-cis retinoic acid.
EMBO J., 19, 2000
6ZLM
DownloadVisualize
BU of 6zlm by Molmil
Dihydrolipoyllysine-residue acetyltransferase component of fungal pyruvate dehydrogenase complex with protein X bound
分子名称: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial, Pyruvate dehydrogenase X component
著者Forsberg, B.O, Aibara, S, Howard, R.J, Mortezaei, N, Lindahl, E.
登録日2020-06-30
公開日2020-09-23
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Arrangement and symmetry of the fungal E3BP-containing core of the pyruvate dehydrogenase complex.
Nat Commun, 11, 2020
6YTZ
DownloadVisualize
BU of 6ytz by Molmil
Crystal structure of Malus domestica Double Bond Reductase (MdDBR) in complex with NADPH
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, Double Bond Reductase, ...
著者Caliandro, R, Polsinelli, I, Demitri, N, Benini, S.
登録日2020-04-25
公開日2021-02-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The structural and functional characterization of Malus domestica double bond reductase MdDBR provides insights towards the identification of its substrates.
Int.J.Biol.Macromol., 171, 2021
1FI5
DownloadVisualize
BU of 1fi5 by Molmil
NMR STRUCTURE OF THE C TERMINAL DOMAIN OF CARDIAC TROPONIN C BOUND TO THE N TERMINAL DOMAIN OF CARDIAC TROPONIN I.
分子名称: CALCIUM ION, PROTEIN (TROPONIN C)
著者Gasmi-Seabrook, G.M, Howarth, J.W, Finley, N, Abusamhadneh, E, Gaponenko, V, Brito, R.M, Solaro, R.J, Rosevear, P.R.
登録日2000-08-03
公開日2000-08-23
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structures of the C-terminal domain of cardiac troponin C free and bound to the N-terminal domain of cardiac troponin I.
Biochemistry, 38, 1999
1FBV
DownloadVisualize
BU of 1fbv by Molmil
STRUCTURE OF A CBL-UBCH7 COMPLEX: RING DOMAIN FUNCTION IN UBIQUITIN-PROTEIN LIGASES
分子名称: SIGNAL TRANSDUCTION PROTEIN CBL, SULFATE ION, UBIQUITIN-CONJUGATING ENZYME E12-18 KDA UBCH7, ...
著者Zheng, N, Wang, P, Jeffrey, P.D, Pavletich, N.P.
登録日2000-07-17
公開日2000-08-30
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of a c-Cbl-UbcH7 complex: RING domain function in ubiquitin-protein ligases.
Cell(Cambridge,Mass.), 102, 2000
6XJ3
DownloadVisualize
BU of 6xj3 by Molmil
Crystal structure of Class D beta-lactamase from Klebsiella quasipneumoniae in complex with avibactam
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Chang, C, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-06-22
公開日2020-07-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Class D beta-lactamase from Klebsiella quasipneumoniae
To Be Published

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon