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PDB: 62 件

6FEK
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Oncogenic point mutation of RET receptor tyrosine kinase
分子名称: ADENOSINE, FORMIC ACID, Proto-oncogene tyrosine-protein kinase receptor Ret
著者McDonald, N.Q, Kohno, T.
登録日2018-01-02
公開日2018-02-28
最終更新日2018-05-02
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A secondary RET mutation in the activation loop conferring resistance to vandetanib.
Nat Commun, 9, 2018
1BET
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BU of 1bet by Molmil
NEW PROTEIN FOLD REVEALED BY A 2.3 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF NERVE GROWTH FACTOR
分子名称: BETA-NERVE GROWTH FACTOR
著者Mcdonald, N.Q, Lapatto, R, Murray-Rust, J, Gunning, J, Wlodawer, A, Blundell, T.L.
登録日1993-04-08
公開日1994-05-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献New protein fold revealed by a 2.3-A resolution crystal structure of nerve growth factor.
Nature, 354, 1991
1CNT
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CILIARY NEUROTROPHIC FACTOR
分子名称: CILIARY NEUROTROPHIC FACTOR, SULFATE ION, YTTERBIUM (III) ION
著者Mcdonald, N.Q, Panayotatos, N, Hendrickson, W.A.
登録日1996-06-06
公開日1997-03-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of dimeric human ciliary neurotrophic factor determined by MAD phasing.
EMBO J., 14, 1995
8OS6
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Structure of a GFRA1/GDNF LICAM complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Houghton, F.M, Adams, S.E, Briggs, D.C, McDonald, N.Q.
登録日2023-04-18
公開日2023-11-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Architecture and regulation of a GDNF-GFR alpha 1 synaptic adhesion assembly.
Nat Commun, 14, 2023
1SGF
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BU of 1sgf by Molmil
CRYSTAL STRUCTURE OF 7S NGF: A COMPLEX OF NERVE GROWTH FACTOR WITH FOUR BINDING PROTEINS (SERINE PROTEINASES)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NERVE GROWTH FACTOR, ...
著者Bax, B.D.V, Blundell, T.L, Murray-Rust, J, Mcdonald, N.Q.
登録日1997-08-08
公開日1998-05-27
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structure of mouse 7S NGF: a complex of nerve growth factor with four binding proteins.
Structure, 5, 1997
7NZN
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Structure of RET kinase domain bound to inhibitor JB-48
分子名称: 2-[4-[[4-[1-[2-(dimethylamino)ethyl]pyrazol-4-yl]-6-[(3-methyl-1~{H}-pyrazol-5-yl)amino]pyrimidin-2-yl]amino]phenyl]-~{N}-(3-fluorophenyl)ethanamide, FORMIC ACID, Proto-oncogene tyrosine-protein kinase receptor Ret
著者Briggs, D.C, McDonald, N.Q.
登録日2021-03-24
公開日2022-02-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Discovery of N-Trisubstituted Pyrimidine Derivatives as Type I RET and RET Gatekeeper Mutant Inhibitors with a Novel Kinase Binding Pose.
J.Med.Chem., 65, 2022
2IVS
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BU of 2ivs by Molmil
Crystal structure of non-phosphorylated RET tyrosine kinase domain
分子名称: 2',3'- cyclic AMP, FORMIC ACID, PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET
著者Knowles, P.P, Murray-Rust, J, McDonald, N.Q.
登録日2006-06-16
公開日2006-08-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and Chemical Inhibition of the Ret Tyrosine Kinase Domain.
J.Biol.Chem., 281, 2006
2V51
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Structure of MAL-RPEL1 complexed to actin
分子名称: ACTIN, ALPHA SKELETAL MUSCLE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Mouilleron, S, Guettler, S, Langer, C.A, Treisman, R, McDonald, N.Q.
登録日2008-10-01
公開日2008-11-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Molecular basis for G-actin binding to RPEL motifs from the serum response factor coactivator MAL.
EMBO J., 27, 2008
4UU6
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CRYSTAL STRUCTURE OF THE PDZ DOMAIN OF PALS1
分子名称: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
著者Ivanova, M.E, Purkiss, A.G, McDonald, N.Q.
登録日2014-07-24
公開日2015-01-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of the human Pals1 PDZ domain with and without ligand suggest gated access of Crb to the PDZ peptide-binding groove.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
2VT8
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Structure of a conserved dimerisation domain within Fbox7 and PI31
分子名称: PROTEASOME INHIBITOR PI31 SUBUNIT
著者Kirk, R.J, Murray-Rust, J, Knowles, P.P, Laman, H, McDonald, N.Q.
登録日2008-05-12
公開日2008-05-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of a Conserved Dimerization Domain within the F-Box Protein Fbxo7 and the Pi31 Proteasome Inhibitor.
J.Biol.Chem., 283, 2008
4UX8
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RET recognition of GDNF-GFRalpha1 ligand by a composite binding site promotes membrane-proximal self-association
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GDNF FAMILY RECEPTOR ALPHA-1, ...
著者Goodman, K, Kjaer, S, Beuron, F, Knowles, P, Nawrotek, A, Burns, E, Purkiss, A, George, R, Santoro, M, Morris, E.P, McDonald, N.Q.
登録日2014-08-19
公開日2014-10-01
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (24 Å)
主引用文献Ret Recognition of Gdnf-Gfralpha1 Ligand by a Composite Binding Site Promotes Membrane-Proximal Self-Association.
Cell Rep., 8, 2014
6SXB
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BU of 6sxb by Molmil
XPF-ERCC1 Cryo-EM Structure, DNA-Bound form
分子名称: DNA (5'-D(*TP*CP*AP*GP*CP*AP*TP*CP*TP*G)-3'), DNA (5'-D(P*CP*AP*GP*AP*TP*GP*CP*TP*GP*A)-3'), DNA excision repair protein ERCC-1, ...
著者Jones, M.L, Briggs, D.C, McDonald, N.Q.
登録日2019-09-25
公開日2020-03-11
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (7.9 Å)
主引用文献Cryo-EM structures of the XPF-ERCC1 endonuclease reveal how DNA-junction engagement disrupts an auto-inhibited conformation.
Nat Commun, 11, 2020
6SXA
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XPF-ERCC1 Cryo-EM Structure, Apo-form
分子名称: DNA excision repair protein ERCC-1, DNA repair endonuclease XPF
著者Jones, M.L, Briggs, D.C, McDonald, N.Q.
登録日2019-09-25
公開日2020-03-11
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structures of the XPF-ERCC1 endonuclease reveal how DNA-junction engagement disrupts an auto-inhibited conformation.
Nat Commun, 11, 2020
7AB8
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Crystal structure of a GDNF-GFRalpha1 complex
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Adams, S.E, Earl, C.P, Purkiss, A.G, McDonald, N.Q.
登録日2020-09-07
公開日2021-01-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A two-site flexible clamp mechanism for RET-GDNF-GFR alpha 1 assembly reveals both conformational adaptation and strict geometric spacing.
Structure, 29, 2021
7AML
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RET/GDNF/GFRa1 extracellular complex Cryo-EM structure
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GDNF family receptor alpha, ...
著者Adams, S.E, Earl, C.P, Purkiss, A.G, McDonald, N.Q.
登録日2020-10-09
公開日2021-01-13
最終更新日2021-07-14
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献A two-site flexible clamp mechanism for RET-GDNF-GFR alpha 1 assembly reveals both conformational adaptation and strict geometric spacing.
Structure, 29, 2021
7AMK
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BU of 7amk by Molmil
Zebrafish RET Cadherin Like Domains 1 to 4.
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Purkiss, A.G, McDonald, N.Q, Goodman, K.M, Narowtek, A, Knowles, P.P.
登録日2020-10-09
公開日2021-02-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A two-site flexible clamp mechanism for RET-GDNF-GFR alpha 1 assembly reveals both conformational adaptation and strict geometric spacing.
Structure, 29, 2021
1UW5
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BU of 1uw5 by Molmil
Structure of PITP-alpha complexed to phosphatidylinositol
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL, PHOSPHATIDYLINOSITOL TRANSFER PROTEIN ALPHA ISOFORM
著者Tilley, S.J, Skippen, A, Murray-Rust, J, Cockcroft, S, McDonald, N.Q.
登録日2004-01-30
公開日2004-03-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure-Function Analysis of Human [Corrected] Phosphatidylinositol Transfer Protein Alpha Bound to Phosphatidylinositol.
Structure, 12, 2004
4UU5
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CRYSTAL STRUCTURE OF THE PDZ DOMAIN OF PALS1 IN COMPLEX WITH THE CRB PEPTIDE
分子名称: 2,2,4,4,6,6,8-heptamethylnonane, CHLORIDE ION, MAGUK P55 SUBFAMILY MEMBER 5, ...
著者Ivanova, M.E, Purkiss, A.G, McDonald, N.Q.
登録日2014-07-24
公開日2015-01-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Structures of the human Pals1 PDZ domain with and without ligand suggest gated access of Crb to the PDZ peptide-binding groove.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
5LI1
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Structure of a Par3-inhibitory peptide bound to PKCiota core kinase domain
分子名称: GLYCEROL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Soriano, E.V, Purkiss, A.G, McDonald, N.Q.
登録日2016-07-13
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献aPKC Inhibition by Par3 CR3 Flanking Regions Controls Substrate Access and Underpins Apical-Junctional Polarization.
Dev.Cell, 38, 2016
5LIH
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Structure of a peptide-substrate bound to PKCiota core kinase domain
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MANGANESE (II) ION, ...
著者Soriano, E.V, Purkiss, A.G, McDonald, N.Q.
登録日2016-07-14
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献aPKC Inhibition by Par3 CR3 Flanking Regions Controls Substrate Access and Underpins Apical-Junctional Polarization.
Dev.Cell, 38, 2016
5LI9
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Structure of a nucleotide-bound form of PKCiota core kinase domain
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Ivanova, M.E, Purkiss, A.G, McDonald, N.Q.
登録日2016-07-14
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献aPKC Inhibition by Par3 CR3 Flanking Regions Controls Substrate Access and Underpins Apical-Junctional Polarization.
Dev.Cell, 38, 2016
1MKP
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CRYSTAL STRUCTURE OF PYST1 (MKP3)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, PYST1
著者Stewart, A.E, Dowd, S, Keyse, S, Mcdonald, N.Q.
登録日1998-07-11
公開日1999-07-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of the MAPK phosphatase Pyst1 catalytic domain and implications for regulated activation.
Nat.Struct.Biol., 6, 1999
1F5Q
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CRYSTAL STRUCTURE OF MURINE GAMMA HERPESVIRUS CYCLIN COMPLEXED TO HUMAN CYCLIN DEPENDENT KINASE 2
分子名称: CHLORIDE ION, CYCLIN DEPENDENT KINASE 2, GAMMA HERPESVIRUS CYCLIN
著者Card, G.L, Knowles, P, Laman, H, Jones, N, McDonald, N.Q.
登録日2000-06-15
公開日2000-12-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a gamma-herpesvirus cyclin-cdk complex.
EMBO J., 19, 2000
1GR0
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myo-inositol 1-phosphate synthase from Mycobacterium tuberculosis in complex with NAD and zinc.
分子名称: CACODYLATE ION, INOSITOL-3-PHOSPHATE SYNTHASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Norman, R.A, Murray-Rust, J, McDonald, N.Q, TB Structural Genomics Consortium (TBSGC)
登録日2001-12-10
公開日2002-03-12
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure of Inositol 1-Phosphate Synthase from Mycobacterium Tuberculosis, a Key Enzyme in Phosphatidylinositol Synthesis
Structure, 10, 2002
5FM2
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Crystal structure of hyper-phosphorylated RET kinase domain with (proximal) juxtamembrane segment
分子名称: 1-TER-BUTYL-3-P-TOLYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE, PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET
著者Plaza-Menacho, I, Barnouin, K, Barry, R, Borg, A, Orme, M, Mouilleron, S, Martinez-Torres, R.J, Meier, P, McDonald, N.Q.
登録日2015-10-30
公開日2016-12-28
最終更新日2019-04-24
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献RET Functions as a Dual-Specificity Kinase that Requires Allosteric Inputs from Juxtamembrane Elements.
Cell Rep, 17, 2016

 

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