Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51689 results

7SUU
DownloadVisualize
BU of 7suu by Molmil
Crystal Structure of Mouse Cadherin-23 EC25-26
Descriptor: CALCIUM ION, CHLORIDE ION, Cadherin-23, ...
Authors:Boyer, M.D, Sandhu, J.S, Sotomayor, M.
Deposit date:2021-11-18
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.248 Å)
Cite:Crystal Structure of Mouse Cadherin-23 EC25-26
to be published
6ML1
DownloadVisualize
BU of 6ml1 by Molmil
Structure of the USP15 deubiquitinase domain in complex with an affinity-matured inhibitory Ubv
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Singer, A.U, Teyra, J, Boehmelt, G, Lenter, M, Sicheri, F, Sidhu, S.S.
Deposit date:2018-09-26
Release date:2019-01-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Functional Characterization of Ubiquitin Variant Inhibitors of USP15.
Structure, 27, 2019
7SX6
DownloadVisualize
BU of 7sx6 by Molmil
Crystal structure of broadly neutralizing antibody N49P9.3 Fab in complex with HIV-1 Clade A/E strain 93TH057 gp120 core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Tolbert, W.D, Pazgier, M.
Deposit date:2021-11-22
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structure of broadly neutralizing antibody N49P9.3 Fab in complex with HIV-1 Clade A/E strain 93TH057 gp120 core
To Be Published
6PJH
DownloadVisualize
BU of 6pjh by Molmil
HIV-1 Protease NL4-3 WT in Complex with LR3-28
Descriptor: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S,4S,5S)-4-hydroxy-5-{[N-(methoxycarbonyl)-L-valyl]amino}-1,6-diphenylhexan-2-yl]carbamate, Protease NL4-3, SULFATE ION
Authors:Lockbaum, G.J, Rusere, L.N, Henes, M, Kosovrasti, K, Lee, S.K, Spielvogel, E, Nalivaika, E.A, Swanstrom, R, KurtYilmaz, N, Schiffer, C.A, Ali, A.
Deposit date:2019-06-28
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Analysis of Potent Hybrid HIV-1 Protease Inhibitors Containing Bis-tetrahydrofuran in a Pseudosymmetric Dipeptide Isostere.
J.Med.Chem., 63, 2020
7SX7
DownloadVisualize
BU of 7sx7 by Molmil
Crystal structure of broadly neutralizing antibody N49P9.3-FR3-3 Fab in complex with HIV-1 Clade A/E strain 93TH057 gp120 core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, N49P9.3-FR3-3 ANTIBODY FAB HEAVY CHAIN, ...
Authors:Tolbert, W.D, Pazgier, M.
Deposit date:2021-11-22
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of broadly neutralizing antibody N49P9.3-FR3-3 Fab in complex with HIV-1 Clade A/E strain 93TH057 gp120 core
To Be Published
1SEG
DownloadVisualize
BU of 1seg by Molmil
Crystal structure of a toxin chimera between Lqh-alpha-IT from the scorpion Leiurus quinquestriatus hebraeus and AAH2 from Androctonus australis hector
Descriptor: AAH2: LQH-ALPHA-IT (FACE) CHIMERIC TOXIN, NITRATE ION, PROPANOIC ACID, ...
Authors:Karbat, I, Frolow, F, Froy, O, Gilles, N, Cohen, L, Turkov, M, Gordon, D, Gurevitz, M.
Deposit date:2004-02-17
Release date:2004-08-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Molecular basis of the high insecticidal potency of scorpion alpha-toxins.
J.Biol.Chem., 279, 2004
7O35
DownloadVisualize
BU of 7o35 by Molmil
Crystal Structure of SARS-CoV-2 N-CTD in complex with GTP (I)
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Nucleoprotein
Authors:Ciges-Tomas, J.R, Vilar, M.
Deposit date:2021-04-01
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of a guanine-specific pocket in the protein N of SARS-CoV-2.
Commun Biol, 5, 2022
6V8S
DownloadVisualize
BU of 6v8s by Molmil
Crystal structure of Ara h 8.0201
Descriptor: 8-ANILINO-1-NAPHTHALENE SULFONATE, Ara h 8 allergen isoform, SULFATE ION
Authors:Pote, S, Offermann, L.R, Hurlburt, B.K, McBride, J.K, Chruszcz, M.
Deposit date:2019-12-12
Release date:2020-12-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Ara h 8.0201
To Be Published
6N4B
DownloadVisualize
BU of 6n4b by Molmil
Cannabinoid Receptor 1-G Protein Complex
Descriptor: CHOLESTEROL, Cannabinoid receptor 1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Krishna Kumar, K, Shalev-Benami, M, Hu, H, Weis, W.I, Kobilka, B.K, Skiniotis, G.
Deposit date:2018-11-18
Release date:2019-01-30
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of a Signaling Cannabinoid Receptor 1-G Protein Complex.
Cell, 176, 2019
7ZM0
DownloadVisualize
BU of 7zm0 by Molmil
Structure of UCHL1 in complex with GK13S inhibitor
Descriptor: (3S)-1-(iminomethyl)-N-[1-[4-(pent-4-ynylcarbamoyl)phenyl]imidazol-4-yl]pyrrolidine-3-carboxamide, Ubiquitin carboxyl-terminal hydrolase isozyme L1
Authors:Grethe, C, Gersch, M.
Deposit date:2022-04-18
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structural basis for specific inhibition of the deubiquitinase UCHL1.
Nat Commun, 13, 2022
6PL5
DownloadVisualize
BU of 6pl5 by Molmil
Structural coordination of polymerization and crosslinking by a peptidoglycan synthase complex
Descriptor: Penicillin-binding protein 2/cell division protein FtsI, Peptidoglycan glycosyltransferase RodA, Unknown peptide
Authors:Sjodt, M, Rohs, P.D.A, Erlandson, S.C, Zheng, S, Rudner, D.Z, Bernhardt, T.G, Kruse, A.C.
Deposit date:2019-06-30
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural coordination of polymerization and crosslinking by a SEDS-bPBP peptidoglycan synthase complex.
Nat Microbiol, 5, 2020
6N4V
DownloadVisualize
BU of 6n4v by Molmil
CryoEM structure of Leviviridae PP7 WT coat protein dimer capsid (PP7PP7-WT)
Descriptor: Coat protein
Authors:Liangjun, Z, Kopylov, M, Potter, C.S, Carragher, B, Finn, M.G.
Deposit date:2018-11-20
Release date:2019-04-03
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Engineering the PP7 Virus Capsid as a Peptide Display Platform.
Acs Nano, 13, 2019
6FHH
DownloadVisualize
BU of 6fhh by Molmil
Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter bound to a 22-mer modified Pol II CTD peptide with serine 5 thiophosphorylated.
Descriptor: PHOSPHATE ION, Polymerase acidic protein, Polymerase basic protein 2, ...
Authors:Lukarska, M, Cusack, S.
Deposit date:2018-01-14
Release date:2019-01-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Towards New Anti-Influenza Therapeutics: Structure-Activity Relationships in the Interaction between Heterotrimeric Influenza Polymerase and Pol II C-terminal domain
To Be Published
6V7P
DownloadVisualize
BU of 6v7p by Molmil
Crystal structure of SUMO1 in complex with PIAS-SIM2
Descriptor: Protein PIAS, Small ubiquitin-related modifier 1
Authors:Lussier-Price, M, Wahba, H.M, Mascle, X.H, Cappadocia, L, Sakaguchi, K, Omichinski, J.G.
Deposit date:2019-12-09
Release date:2020-04-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.395 Å)
Cite:Characterization of a C-Terminal SUMO-Interacting Motif Present in Select PIAS-Family Proteins.
Structure, 28, 2020
1UBE
DownloadVisualize
BU of 1ube by Molmil
MsRecA-ADP Complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, RecA
Authors:Datta, S, Krishna, R, Ganesh, N, Chandra, N.R, Muniyappa, K, Vijayan, M.
Deposit date:2003-04-04
Release date:2003-07-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structures of Mycobacterium smegmatis RecA and Its Nucleotide Complexes
J.BACTERIOL., 185, 2003
7O6B
DownloadVisualize
BU of 7o6b by Molmil
Cooperation between the intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly
Descriptor: Transcription elongation factor SPT6
Authors:Kasiliauskaite, A, Kubicek, K, Klumpler, T, Zanova, M, Zapletal, D, Novacek, J, Stefl, R.
Deposit date:2021-04-09
Release date:2022-04-20
Last modified:2022-06-22
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Cooperation between intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly.
Nucleic Acids Res., 50, 2022
1UCD
DownloadVisualize
BU of 1ucd by Molmil
Crystal structure of Ribonuclease MC1 from bitter gourd seeds complexed with 5'-UMP
Descriptor: Ribonuclease MC, URACIL, URIDINE-5'-MONOPHOSPHATE
Authors:Suzuki, A, Numata, T, Yao, M, Kimura, M, Tanaka, I.
Deposit date:2003-04-10
Release date:2004-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of RNase MC1 from bitter gourd seeds in complex with 5'UMP
To be published
6MZX
DownloadVisualize
BU of 6mzx by Molmil
Cryo-EM structure of the HO BMC shell: Icosahedral reconstruction (main population)
Descriptor: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml, Microcompartments protein HO-5815, Microcompartments protein HO-5816
Authors:Greber, B.J, Sutter, M, Kerfeld, C.A.
Deposit date:2018-11-06
Release date:2019-03-13
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The Plasticity of Molecular Interactions Governs Bacterial Microcompartment Shell Assembly.
Structure, 27, 2019
6F18
DownloadVisualize
BU of 6f18 by Molmil
Structure of Mb NMH H64V, V68A mutant complex with EDA
Descriptor: ETHYL ACETATE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Tinzl, M, Hayashi, T, Mori, T, Hilvert, D.
Deposit date:2017-11-21
Release date:2018-08-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Capture and characterization of a reactive haem-carbenoid complex in an artificial metalloenzyme
Nat Catal, 1, 2018
6VAG
DownloadVisualize
BU of 6vag by Molmil
Crystal structure of the oligomerization domain of phosphoprotein from parainfluenza virus 5
Descriptor: GLYCEROL, Phosphoprotein
Authors:Aggarwal, M, Abdella, R, He, Y, Lamb, R.A.
Deposit date:2019-12-17
Release date:2020-02-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of a paramyxovirus polymerase complex reveals a unique methyltransferase-CTD conformation.
Proc.Natl.Acad.Sci.USA, 117, 2020
6N07
DownloadVisualize
BU of 6n07 by Molmil
Structure of the HO BMC shell: BMC-TD focused map, open inner pore, compacted shell
Descriptor: Microcompartments protein
Authors:Greber, B.J, Sutter, M, Kerfeld, C.A.
Deposit date:2018-11-06
Release date:2019-03-13
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The Plasticity of Molecular Interactions Governs Bacterial Microcompartment Shell Assembly.
Structure, 27, 2019
5AFW
DownloadVisualize
BU of 5afw by Molmil
Assembly of methylated LSD1 and CHD1 drives AR-dependent transcription and translocation
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1, ...
Authors:Metzger, E, Willmann, D, McMillan, J, Petroll, K, Metzger, P, Gerhardt, S, vonMaessenhausen, A, Schott, A.K, Espejo, A, Eberlin, A, Wohlwend, D, Schuele, K.M, Schleicher, M, Perner, S, Bedford, M.T, Dengjel, J, Flaig, R, Einsle, O, Schuele, R.
Deposit date:2015-01-26
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Assembly of Methylated Kdm1A and Chd1 Drives Androgen Receptor-Dependent Transcription and Translocation.
Nat.Struct.Mol.Biol., 23, 2016
7ZY4
DownloadVisualize
BU of 7zy4 by Molmil
Crystal structure of human CstF77 in complex with hFip1
Descriptor: Cleavage stimulation factor subunit 3, GLYCEROL, hFip1
Authors:Muckenfuss, L.M, Jinek, M.
Deposit date:2022-05-23
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Fip1 is a multivalent interaction scaffold for processing factors in human mRNA 3' end biogenesis.
Elife, 11, 2022
6HTG
DownloadVisualize
BU of 6htg by Molmil
Crystal structure of Schistosoma mansoni HDAC8 complexed with a benzohydroxamate inhibitor 4
Descriptor: 3-benzamido-4-chloranyl-~{N}-oxidanyl-benzamide, DIMETHYLFORMAMIDE, GLYCEROL, ...
Authors:Shaik, T.B, Marek, M, Romier, C.
Deposit date:2018-10-04
Release date:2018-10-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.939 Å)
Cite:Characterization of Histone Deacetylase 8 (HDAC8) Selective Inhibition Reveals Specific Active Site Structural and Functional Determinants.
J. Med. Chem., 61, 2018
2MVF
DownloadVisualize
BU of 2mvf by Molmil
Structural insight into an essential assembly factor network on the pre-ribosome
Descriptor: Uncharacterized protein
Authors:Lee, W, Bassler, J, Paternoga, H, Holdermann, I, Thomas, M, Granneman, S, Barrio-Garcia, C, Nyarko, A, Stier, G, Clark, S.A, Schraivogel, D, Kallas, M, Beckmann, R, Tollervey, D, Barbar, E, Sinning, I, Hurt, E.
Deposit date:2014-10-02
Release date:2014-12-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A network of assembly factors is involved in remodeling rRNA elements during preribosome maturation.
J.Cell Biol., 207, 2014

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon