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PDB: 52161 results

9FA8
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BU of 9fa8 by Molmil
Streptococcal Protein G antibody-binding domain C2 - variant 3
Descriptor: C2 variant 3
Authors:Jonnson, M, Ul Mushtaq, A, Nagy, T.M, von Witting, E, Lofblom, J, Nam, K, Wolf-Watz, M, Hober, S.
Deposit date:2024-05-10
Release date:2024-10-02
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Cooperative folding as a molecular switch in an evolved antibody binder.
J.Biol.Chem., 300, 2024
4M49
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BU of 4m49 by Molmil
Lactate Dehydrogenase A in complex with a substituted pyrazine inhibitor compound 18
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 3-(5-amino-6-{[(1R)-1-phenylethyl]amino}pyrazin-2-yl)-4-chlorobenzoic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Eigenbrot, C, Ultsch, M.
Deposit date:2013-08-06
Release date:2013-09-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.052 Å)
Cite:Identification of 2-amino-5-aryl-pyrazines as inhibitors of human lactate dehydrogenase.
Bioorg.Med.Chem.Lett., 23, 2013
4MEC
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BU of 4mec by Molmil
Crystal structure of RAT Heme oxygenase-1 in complex with ZN(II)-Protoporphyrin IX
Descriptor: Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING ZN
Authors:Sugishima, M.
Deposit date:2013-08-26
Release date:2014-08-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Distal regulation of heme binding of heme oxygenase-1 mediated by conformational fluctuations
Biochemistry, 54, 2015
5X07
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BU of 5x07 by Molmil
Crystal structure of FOXA2 DNA binding domain bound to a full consensus DNA site
Descriptor: DNA (5'-D(*CP*AP*AP*AP*AP*TP*GP*TP*AP*AP*AP*CP*AP*AP*GP*A)-3'), DNA (5'-D(*TP*CP*TP*TP*GP*TP*TP*TP*AP*CP*AP*TP*TP*TP*TP*G)-3'), Hepatocyte nuclear factor 3-beta
Authors:Li, J, Guo, M, Zhou, Z, Jiang, L, Chen, X, Qu, L, Wu, D, Chen, Z, Chen, L, Chen, Y.
Deposit date:2017-01-20
Release date:2017-08-16
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.796 Å)
Cite:Structure of the Forkhead Domain of FOXA2 Bound to a Complete DNA Consensus Site
Biochemistry, 56, 2017
4MGC
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BU of 4mgc by Molmil
Crystal structure of hERa-LBD (Y537S) in complex with benzophenone-2
Descriptor: Estrogen receptor, GLYCEROL, Nuclear receptor coactivator 1, ...
Authors:Delfosse, V, Grimaldi, M, Bourguet, W.
Deposit date:2013-08-28
Release date:2014-09-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and functional profiling of environmental ligands for estrogen receptors.
Environ.Health Perspect., 122, 2014
5X0X
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BU of 5x0x by Molmil
Complex of Snf2-Nucleosome complex with Snf2 bound to position +6 of the nucleosome
Descriptor: DNA (167-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Li, M, Liu, X, Xia, X, Chen, Z, Li, X.
Deposit date:2017-01-23
Release date:2017-04-19
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:Mechanism of chromatin remodelling revealed by the Snf2-nucleosome structure.
Nature, 544, 2017
5WY5
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BU of 5wy5 by Molmil
Crystal structure of MAGEG1 and NSE1 complex
Descriptor: MAGNESIUM ION, Melanoma-associated antigen G1, Non-structural maintenance of chromosomes element 1 homolog, ...
Authors:Yang, M, Gao, J.
Deposit date:2017-01-11
Release date:2017-05-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Mage-Ring Protein Complexes Comprise A Family Of E3 Ubiquitin Ligases.
Mol.Cell, 39, 2010
5X2L
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BU of 5x2l by Molmil
Crystal Structure of Human Serine Racemase
Descriptor: MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE, Serine racemase
Authors:Obita, T, Matsumoto, K, Mori, H, Toyooka, N, Mizuguchi, M.
Deposit date:2017-02-01
Release date:2018-01-31
Last modified:2021-02-24
Method:X-RAY DIFFRACTION (1.806 Å)
Cite:Design, synthesis, and evaluation of novel inhibitors for wild-type human serine racemase.
Bioorg. Med. Chem. Lett., 2017
4MHB
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BU of 4mhb by Molmil
Structure of a putative reductase from Yersinia pestis
Descriptor: Putative aldo/keto reductase, SULFATE ION
Authors:Anderson, S.M, Wawrzak, Z, Kudritska, M, Kwon, K, Rembert, P, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-08-29
Release date:2013-10-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of a putative reductase from Yersinia pestis
To be Published
4MAV
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BU of 4mav by Molmil
Crystal structure of signaling protein SPB-40 complexed with 5-hydroxymethyl oxalanetriol at 2.80 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3-like protein 1, GLYCEROL, ...
Authors:Yamini, S, Chaudhary, A, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2013-08-17
Release date:2013-09-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Crystal structure of signaling protein SPB-40 complexed with 5-hydroxymethyl oxalanetriol at 2.80 A resolution
To be Published
4Y3E
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BU of 4y3e by Molmil
Endothiapepsin in complex with fragment 5
Descriptor: 1H-isoindol-3-amine, ACETATE ION, DIMETHYL SULFOXIDE, ...
Authors:Radeva, N, Uehlein, M, Weiss, M.S, Heine, A, Klebe, G.
Deposit date:2015-02-10
Release date:2016-02-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystallographic Fragment Screening of an Entire Library
To Be Published
4LSA
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BU of 4lsa by Molmil
Crystal structure of BRI1 sud1 (Gly643Glu) bound to brassinolide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Brassinolide, Protein BRASSINOSTEROID INSENSITIVE 1, ...
Authors:Santiago, J, Henzler, C, Hothorn, M.
Deposit date:2013-07-22
Release date:2013-09-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular mechanism for plant steroid receptor activation by somatic embryogenesis co-receptor kinases.
Science, 341, 2013
4MBT
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BU of 4mbt by Molmil
Structure of haze forming proteins in white wines: Vitis vinifera thaumatin-like proteins
Descriptor: GLYCEROL, VVTL1
Authors:Marangon, M, Menz, R.I, Waters, E.J, Van Sluyter, S.C.
Deposit date:2013-08-19
Release date:2014-08-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of Haze Forming Proteins in White Wines: Vitis vinifera Thaumatin-Like Proteins.
Plos One, 9, 2014
7QLG
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BU of 7qlg by Molmil
CRYSTAL STRUCTURE OF E.coli ALCOHOL DEHYDROGENASE - FucO MUTANT L259V COMPLEXED WITH FE, NADH, AND GLYCEROL
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FE (III) ION, GLYCEROL, ...
Authors:Sridhar, S, Kiema, T.R, Widertsen, M, Wierenga, R.K.
Deposit date:2021-12-20
Release date:2022-12-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures and kinetic studies of a laboratory evolved aldehyde reductase explain the dramatic shift of its new substrate specificity.
Iucrj, 10, 2023
4MF5
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BU of 4mf5 by Molmil
Crystal structure of glutathione transferase BgramDRAFT_1843 from Burkholderia graminis, Target EFI-507289, with traces of one GSH bound
Descriptor: FORMIC ACID, GLUTATHIONE, Glutathione S-transferase domain
Authors:Patskovsky, Y, Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Armstrong, R.N, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-08-27
Release date:2013-09-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.11 Å)
Cite:Crystal structure of glutathione transferase BgramDRAFT_1843 from Burkholderia graminis, Target EFI-507289, with traces of one GSH bound
To be Published
4MFE
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BU of 4mfe by Molmil
Structure of the carboxyl transferase domain from Rhizobium etli pyruvate carboxylase with 3-hydroxypyruvate
Descriptor: 3-HYDROXYPYRUVIC ACID, BIOTIN, CHLORIDE ION, ...
Authors:Lietzan, A.D, St.Maurice, M.
Deposit date:2013-08-27
Release date:2013-11-13
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Insights into the carboxyltransferase reaction of pyruvate carboxylase from the structures of bound product and intermediate analogs.
Biochem.Biophys.Res.Commun., 441, 2013
4LY0
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BU of 4ly0 by Molmil
Crystal structure WlaRD, a sugar 3N-formyl transferase in the presence of dTDP-Glc and 10-N-Formyl-THF
Descriptor: 1,2-ETHANEDIOL, 2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ...
Authors:Thoden, J.B, Goneau, M.-F, Gilbert, M, Holden, H.M.
Deposit date:2013-07-30
Release date:2013-08-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of a sugar N-formyltransferase from Campylobacter jejuni.
Biochemistry, 52, 2013
4M0C
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BU of 4m0c by Molmil
The crystal structure of a FMN-dependent NADH-azoreductase from Bacillus anthracis str. Ames Ancestor in complex with FMN.
Descriptor: FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase 1, GLYCEROL, ...
Authors:Tan, K, Gu, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-08-01
Release date:2013-08-14
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.073 Å)
Cite:The crystal structure of a FMN-dependent NADH-azoreductase from Bacillus anthracis str. Ames Ancestor in complex with FMN.
To be Published
9EME
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BU of 9eme by Molmil
AL amyloid fibril from the FOR103 light chain
Descriptor: lambda 3 immunoglobulin light chain fragment, residues 2-116
Authors:Pfeiffer, P.B, Karimi-Farsijani, S, Kupfer, N, Schmidt, M, Faendrich, M.
Deposit date:2024-03-08
Release date:2024-06-26
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Light chain mutations contribute to defining the fibril morphology in systemic AL amyloidosis.
Nat Commun, 15, 2024
4M0G
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BU of 4m0g by Molmil
The crystal structure of an adenylosuccinate synthetase from Bacillus anthracis str. Ames Ancestor.
Descriptor: Adenylosuccinate synthetase, CHLORIDE ION
Authors:Tan, K, Zhou, M, Zhang, R, Kwon, K, Anderson, W.F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-08-01
Release date:2013-08-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.152 Å)
Cite:The crystal structure of an adenylosuccinate synthetase from Bacillus anthracis str. Ames Ancestor.
To be Published
5WEG
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BU of 5weg by Molmil
Crystal Structure of UDP-glucose pyrophosphorylase from Sugarcane
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, UTP--glucose-1-phosphate uridylyltransferase
Authors:Cotrim, C.A, Soares, J.S.M, Kobe, B, Menossi, M.
Deposit date:2017-07-10
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure and insights into the oligomeric state of UDP-glucose pyrophosphorylase from sugarcane.
PLoS ONE, 13, 2018
5WRT
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BU of 5wrt by Molmil
Crystal structure of type I inorganic pyrophosphatase from Toxoplasma gondii.
Descriptor: MAGNESIUM ION, Soluble inorganic pyrophosphatase
Authors:Jamwal, A, Yogavel, M, Sharma, A.
Deposit date:2016-12-03
Release date:2017-10-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.348 Å)
Cite:Structural and Biochemical Characterization of Apicomplexan Inorganic Pyrophosphatases
Sci Rep, 7, 2017
4M1C
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BU of 4m1c by Molmil
Crystal Structure Analysis of Fab-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Amyloid-Beta (1-40)
Descriptor: Amyloid beta A4 protein, Fab-bound IDE, heavy chain, ...
Authors:McCord, L.M, Liang, W, Farcasanu, M, Scherpelz, K, Meredith, S.C, Koide, S, Tang, W.J.
Deposit date:2013-08-02
Release date:2014-08-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.5007 Å)
Cite:Crystal Structure Analysis of Fab-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Amyloid-Beta (1-40)
To be Published
4MGA
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BU of 4mga by Molmil
Crystal structure of hERa-LBD (Y537S) in complex with 4-tert-octylphenol
Descriptor: 4-(2,4,4-trimethylpentan-2-yl)phenol, Estrogen receptor, Nuclear receptor coactivator 1
Authors:Delfosse, V, Grimaldi, M, Bourguet, W.
Deposit date:2013-08-28
Release date:2014-09-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional profiling of environmental ligands for estrogen receptors.
Environ.Health Perspect., 122, 2014
4M3B
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BU of 4m3b by Molmil
Rapid and efficient design of new inhibitors of Mycobacterium tuberculosis transcriptional repressor EthR using fragment growing, merging and linking approaches
Descriptor: 4-(2-methyl-1,3-thiazol-4-yl)-N-(3,3,3-trifluoropropyl)benzamide, HTH-type transcriptional regulator EthR
Authors:Villemagne, B, Flipo, M, Blondiaux, N, Crauste, C, Malaquin, S, Leroux, F, Piveteau, C, Villeret, V, Brodin, P, Villoutreix, B, Sperandio, O, Wohlkonig, A, Wintjens, R, Deprez, B, Baulard, A, Willand, N.
Deposit date:2013-08-06
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Ligand Efficiency Driven Design of New Inhibitors of Mycobacterium tuberculosis Transcriptional Repressor EthR Using Fragment Growing, Merging, and Linking Approaches.
J.Med.Chem., 57, 2014

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