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PDB: 52161 results

2A2Z
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Crystal Structure of human deoxycytidine kinase in complex with deoxycytidine and uridine diphosphate
Descriptor: 2'-DEOXYCYTIDINE, CALCIUM ION, Deoxycytidine kinase, ...
Authors:Godsey, M.H, Ort, S, Sabini, E, Konrad, M, Lavie, A.
Deposit date:2005-06-23
Release date:2006-01-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Structural basis for the preference of UTP over ATP in human deoxycytidine kinase: illuminating the role of main-chain reorganization.
Biochemistry, 45, 2006
2A3T
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Cu-containing nitrite reductase
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, MAGNESIUM ION
Authors:Jacobson, F, Guo, H, Olesen, K, Okvist, M, Neutze, R, Sjolin, L.
Deposit date:2005-06-27
Release date:2005-08-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structures of the oxidized and reduced forms of nitrite reductase from Rhodobacter sphaeroides 2.4.3 at high pH: changes in the interactions of the type 2 copper.
Acta Crystallogr.,Sect.D, 61, 2005
6LAC
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BU of 6lac by Molmil
The structural basis of the beta-carbonic anhydrase CafD (C39A mutant) of the filamentous fungus Aspergillus fumigatus
Descriptor: Carbonic anhydrase, ZINC ION
Authors:Jiin, M.S, Kim, S, Kim, N.J, Hong, S, Kim, S, Sung, J.
Deposit date:2019-11-12
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The structural analysis of non-catalytic zinc binding site in the minor beta-carbonic anhydrase CafD
To be published
2A4X
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Crystal Structure Of Mitomycin C-Binding Protein Complexed with Metal-Free Bleomycin A2
Descriptor: BLEOMYCIN A2, Mitomycin-Binding Protein
Authors:Danshiitsoodol, N, de Pinho, C.A, Matoba, Y, Kumagai, T, Sugiyama, M.
Deposit date:2005-06-30
Release date:2006-07-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Mitomycin C (MMC)-binding Protein from MMC-producing Microorganisms Protects from the Lethal Effect of Bleomycin: Crystallographic Analysis to Elucidate the Binding Mode of the Antibiotic to the Protein
J.Mol.Biol., 360, 2006
2A61
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The crystal structure of transcriptional regulator Tm0710 from Thermotoga maritima
Descriptor: transcriptional regulator Tm0710
Authors:Lunin, V.V, Evdokimova, E, Kudritska, M, Chang, C, Joachimiak, A, Edwards, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-07-01
Release date:2005-07-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of transcriptional regulator Tm0710 from Thermotoga maritima
To be Published
2AD9
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Solution structure of Polypyrimidine Tract Binding protein RBD1 complexed with CUCUCU RNA
Descriptor: 5'-R(*CP*UP*CP*UP*CP*U)-3', Polypyrimidine tract-binding protein 1
Authors:Oberstrass, F.C, Auweter, S.D, Erat, M, Hargous, Y, Henning, A, Wenter, P, Reymond, L, Pitsch, S, Black, D.L, Allain, F.H.T.
Deposit date:2005-07-20
Release date:2005-10-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of PTB bound to RNA: specific binding and implications for splicing regulation
Science, 309, 2005
2A56
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fluorescent protein asFP595, A143S, on-state, 5min irradiation
Descriptor: GFP-like non-fluorescent chromoprotein FP595 chain 1, GFP-like non-fluorescent chromoprotein FP595 chain 2
Authors:Andresen, M, Wahl, M.C, Stiel, A.C, Graeter, F, Schaefer, L, Trowitzsch, S, Weber, G, Eggeling, C, Grubmueller, H, Hell, S.W, Jakobs, S.
Deposit date:2005-06-30
Release date:2005-08-16
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of the reversible photoswitch of a fluorescent protein
Proc.Natl.Acad.Sci.Usa, 102, 2005
2AEX
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The 1.58A Crystal Structure of Human Coproporphyrinogen Oxidase Reveals the Structural Basis of Hereditary Coproporphyria
Descriptor: CITRIC ACID, Coproporphyrinogen III oxidase, mitochondrial
Authors:Lee, D.S, Flachsova, E, Bodnarova, M, Demeler, B, Martasek, P, Raman, C.S.
Deposit date:2005-07-24
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural basis of hereditary coproporphyria.
Proc.Natl.Acad.Sci.USA, 102, 2005
2A6M
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Crystal Structure of the ISHp608 Transposase
Descriptor: ISHp608 transposase
Authors:Ronning, D.R, Guynet, C, Ton-Hoang, B, Perez, Z.N, Ghirlando, R, Chandler, M, Dyda, F.
Deposit date:2005-07-03
Release date:2005-10-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Active site sharing and subterminal hairpin recognition in a new class of DNA transposases.
Mol.Cell, 20, 2005
8YM2
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Crystal structure of AIDA-1 PTB domain in complex with SynGAP NPxF motif
Descriptor: Ankyrin repeat and sterile alpha motif domain-containing protein 1B, Ras/Rap GTPase-activating protein SynGAP
Authors:Wang, X, Wang, Y, Cai, Q, Zhang, M.
Deposit date:2024-03-08
Release date:2024-05-29
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:AIDA-1/ANKS1B Binds to the SynGAP Family RasGAPs with High Affinity and Specificity.
J.Mol.Biol., 436, 2024
248D
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BU of 248d by Molmil
CRYSTAL STRUCTURES OF AN A-FORM DUPLEX WITH SINGLE-ADENOSINE BULGES AND A CONFORMATIONAL BASIS FOR SITE SPECIFIC RNA SELF-CLEAVAGE
Descriptor: DNA/RNA (5'-R(*GP*CP*GP*)-D(*AP*TP*AP*TP*AP*)-R(*CP*GP*C)-3'), ORTHORHOMBIC, SPERMINE
Authors:Portmann, S, Grimm, S, Workman, C, Usman, N, Egli, M.
Deposit date:1996-02-02
Release date:1996-03-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structures of an A-form duplex with single-adenosine bulges and a conformational basis for site-specific RNA self-cleavage.
Chem.Biol., 3, 1996
260D
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BU of 260d by Molmil
CRYSTAL STRUCTURE OF THE SELF-COMPLEMENTARY 5'-PURINE START DECAMER D(GCACGCGTGC) IN THE A-DNA CONFORMATION-PART II
Descriptor: DNA (5'-D(*GP*CP*AP*CP*GP*CP*GP*TP*GP*C)-3')
Authors:Ban, C, Sundaralingam, M.
Deposit date:1996-05-21
Release date:1996-06-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the self-complementary 5'-purine start decamer d(GCACGCGTGC) in the A-DNA conformation. II.
Biophys.J., 71, 1996
8YUU
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BU of 8yuu by Molmil
Cryo-EM structure of the histamine-bound H3R-Gi complex
Descriptor: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Shen, Q, Tang, X, Wen, X, Cheng, S, Xiao, P, Zang, S, Shen, D, Jiang, L, Zheng, Y, Zhang, H, Xu, H, Mao, C, Zhang, M, Hu, W, Sun, J, Chen, Z, Zhang, Y.
Deposit date:2024-03-27
Release date:2024-06-05
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Molecular Determinant Underlying Selective Coupling of Primary G-Protein by Class A GPCRs.
Adv Sci, 11, 2024
8YUV
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Cryo-EM structure of the immepip-bound H3R-Gi complex
Descriptor: 4-(1H-imidazol-5-ylmethyl)piperidine, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Shen, Q, Tang, X, Wen, X, Cheng, S, Xiao, P, Zang, S, Shen, D, Jiang, L, Zheng, Y, Zhang, H, Xu, H, Mao, C, Zhang, M, Hu, W, Sun, J, Chen, Z, Zhang, Y.
Deposit date:2024-03-27
Release date:2024-06-05
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular Determinant Underlying Selective Coupling of Primary G-Protein by Class A GPCRs.
Adv Sci, 11, 2024
2AAN
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BU of 2aan by Molmil
Auracyanin A: A "blue" copper protein from the green thermophilic photosynthetic bacterium,chloroflexus aurantiacus
Descriptor: COPPER (II) ION, SULFATE ION, auracyanin A
Authors:Lee, M, Guss, J.M, Freeman, H.C.
Deposit date:2005-07-13
Release date:2006-07-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Crystal Structure of Auracyanin A at 1.85 A Resolution: Why the Photosynthetic Bacterium Chloroflexus Needs Two Almost Identical 'Blue' Copper Proteins
to be published
8YGJ
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BU of 8ygj by Molmil
SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 28-nt)
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, DNA (5'-D(P*TP*GP*AP*TP*GP*GP*CP*AP*GP*AP*GP*TP*AP*CP*TP*AP*G)-3'), DNA (51-MER), ...
Authors:Shuto, Y, Nakagawa, R, Hoki, M, Omura, S.N, Hirano, H, Itoh, Y, Nureki, O.
Deposit date:2024-02-26
Release date:2024-06-05
Last modified:2024-09-11
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis for pegRNA-guided reverse transcription by a prime editor.
Nature, 631, 2024
2AAW
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BU of 2aaw by Molmil
Studies on ligand binding and enzyme inhibition of Plasmodium falciparum glutathione S-transferase
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, L-TREITOL, S-HEXYLGLUTATHIONE, ...
Authors:Hiller, N, Fritz-Wolf, K, Deponte, M, Wende, W, Zimmermann, H, Becker, K.
Deposit date:2005-07-14
Release date:2006-01-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Plasmodium falciparum glutathione S-transferase--structural and mechanistic studies on ligand binding and enzyme inhibition.
Protein Sci., 15, 2006
2ABI
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Crystal structure of the human mineralocorticoid receptor ligand-binding domain bound to deoxycorticosterone
Descriptor: DESOXYCORTICOSTERONE, Mineralocorticoid receptor
Authors:Huyet, J, Pinon, G.-M, Rochel, M, Mayer, C, Rafestin-Oblin, M.-E, Fagart, J.
Deposit date:2005-07-15
Release date:2006-07-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structure of the human mineralocorticoid receptor ligand-binding domain bound to deoxycorticosterone
To be published
8YUT
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BU of 8yut by Molmil
Cryo-EM structure of the amthamine-bound H2R-Gs complex
Descriptor: 5-(2-azanylethyl)-4-methyl-1,3-thiazol-2-amine, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Shen, Q, Tang, X, Wen, X, Cheng, S, Xiao, P, Zang, S, Shen, D, Jiang, L, Zheng, Y, Zhang, H, Xu, H, Mao, C, Zhang, M, Hu, W, Sun, J, Chen, Z, Zhang, Y.
Deposit date:2024-03-27
Release date:2024-06-05
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Molecular Determinant Underlying Selective Coupling of Primary G-Protein by Class A GPCRs.
Adv Sci, 11, 2024
8Y5V
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BU of 8y5v by Molmil
GII.4 Sydney PD and 2'-FL
Descriptor: 1,2-ETHANEDIOL, GII.4 Sydney PD in complex with 2'-FL (powder), alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Hansman, G, Tame, J.R.H, Kher, G, Pancera, M.
Deposit date:2024-02-01
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:GII.4 Sydney PD and 2'-FL
To Be Published
8YIF
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Crystal structure of GH13_30 alpha-glucosidase CmmB in complex with acarviosin
Descriptor: Acarviosin, Alpha-glucosidase
Authors:Saburi, W, Tagami, T, Yu, J, Ose, T, Yao, M, Mori, H.
Deposit date:2024-02-29
Release date:2024-07-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular mechanism for the substrate specificity of Arthrobacter globiformis M6 alpha-glucosidase CmmB, belonging to glycoside hydrolase family 13 subfamily 30
Food Biosci, 61, 2024
28DN
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CRYSTAL STRUCTURE ANALYSIS OF AN A(DNA) OCTAMER D(GTACGTAC)
Descriptor: DNA (5'-D(*GP*TP*AP*CP*GP*TP*AP*C)-3')
Authors:Courseille, C, Dautant, A, Hospital, M, Langlois D'Estaintot, B, Precigoux, G, Molko, D, Teoule, R.
Deposit date:1990-05-03
Release date:1991-07-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure Analysis of an A(DNA) Octamer d(GTACGTAC)
Acta Crystallogr.,Sect.A, 46, 1990
2A2A
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High-resolution crystallographic analysis of the autoinhibited conformation of a human death-associated protein kinase
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, Death-associated protein kinase 2, ...
Authors:Kursula, P, Wilmanns, M.
Deposit date:2005-06-22
Release date:2006-10-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Death-Associated Protein Kinase Activity Is Regulated by Coupled Calcium/Calmodulin Binding to Two Distinct Sites
Structure, 2016
2A4C
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Crystal structure of mouse cadherin-11 EC1
Descriptor: Cadherin-11
Authors:Patel, S.D, Ciatto, C, Chen, C.P, Bahna, F, Schieren, I, Rajebhosale, M, Jessell, T.M, Honig, B, Price, S.R, Shapiro, L.
Deposit date:2005-06-28
Release date:2006-04-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Type II cadherin ectodomain structures: implications for classical cadherin specificity.
Cell(Cambridge,Mass.), 124, 2006
2A53
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fluorescent protein asFP595, A143S, off-state
Descriptor: CHLORIDE ION, GFP-like non-fluorescent chromoprotein FP595 chain 1, GFP-like non-fluorescent chromoprotein FP595 chain 2
Authors:Andresen, M, Wahl, M.C, Stiel, A.C, Graeter, F, Schaefer, L, Trowitzsch, S, Weber, G, Eggeling, C, Grubmueller, H, Hell, S.W, Jakobs, S.
Deposit date:2005-06-30
Release date:2005-08-16
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure and mechanism of the reversible photoswitch of a fluorescent protein
Proc.Natl.Acad.Sci.Usa, 102, 2005

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