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PDB: 51964 results

4JN0
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Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with 1H-pyrrolo[3,2-b]pyridine-6-carbaldehyde
Descriptor: 1H-pyrrolo[3,2-b]pyridine-6-carbaldehyde, Cytochrome c peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Barelier, S, Fischer, M.
Deposit date:2013-03-14
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.864 Å)
Cite:Docking to a water-filled model binding site in Cytochrome c Peroxidase
To be published
6G2P
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BU of 6g2p by Molmil
Crystal structure of L-tryptophan oxidase VioA from Chromobacterium violaceum in complex with L-tryptophan
Descriptor: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent L-tryptophan oxidase VioA, ...
Authors:Lai, H.E, Morgan, M, Moore, S, Freemont, P.
Deposit date:2018-03-23
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A semi-synthetic strategy for derivatization of the violacein natural product scaffold
Biorxiv, 2018
4JND
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BU of 4jnd by Molmil
Structure of a C.elegans sex determining protein
Descriptor: Ca(2+)/calmodulin-dependent protein kinase phosphatase, MAGNESIUM ION
Authors:Feng, Y, Zhang, Y, Ge, J, Yang, M.
Deposit date:2013-03-15
Release date:2013-06-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.652 Å)
Cite:Structural insight into Caenorhabditis elegans sex-determining protein FEM-2.
J.Biol.Chem., 288, 2013
1KHR
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BU of 1khr by Molmil
Crystal Structure of Vat(D) in Complex with Virginiamycin and Coenzyme A
Descriptor: COENZYME A, STREPTOGRAMIN A ACETYLTRANSFERASE, VIRGINIAMYCIN M1
Authors:Sugantino, M, Roderick, S.L.
Deposit date:2001-11-30
Release date:2002-02-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of Vat(D): an acetyltransferase that inactivates streptogramin group A antibiotics.
Biochemistry, 41, 2002
4JGY
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BU of 4jgy by Molmil
Crystal structure of human coxsackievirus A16 uncoating intermediate (space group P4232)
Descriptor: Polyprotein, capsid protein VP1, capsid protein VP2, ...
Authors:Ren, J, Wang, X, Hu, Z, Gao, Q, Sun, Y, Li, X, Porta, C, Walter, T.S, Gilbert, R.J, Zhao, Y, Axford, D, Williams, M, Mcauley, K, Rowlands, D.J, Yin, W, Wang, J, Stuart, D.I, Rao, Z, Fry, E.E.
Deposit date:2013-03-04
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Picornavirus uncoating intermediate captured in atomic detail.
Nat Commun, 4, 2013
6HBB
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Crystal Structure of the small subunit-like domain 1 of CcmM from Synechococcus elongatus (strain PCC 7942)
Descriptor: Carbon dioxide concentrating mechanism protein CcmM, SULFATE ION
Authors:Wang, H, Yan, X, Aigner, H, Bracher, A, Nguyen, N.D, Hee, W.Y, Long, B.M, Price, G.D, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2018-08-10
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Rubisco condensate formation by CcmM in beta-carboxysome biogenesis.
Nature, 566, 2019
4JP1
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BU of 4jp1 by Molmil
Mg2+ bound structure of Vibrio Cholerae CheY3
Descriptor: Chemotaxis protein CheY, MAGNESIUM ION
Authors:Biswas, M, Dasgupta, J, Sen, U.
Deposit date:2013-03-19
Release date:2014-04-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Conformational barrier of CheY3 and inability of CheY4 to bind FliM control the flagellar motor action in Vibrio cholerae
Plos One, 8, 2013
6G4M
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Torpedo californica acetylcholinesterase bound to uncharged hybrid reactivator 1
Descriptor: 2-[(~{E})-hydroxyiminomethyl]-6-[4-(1,2,3,4-tetrahydroacridin-9-ylamino)butyl]pyridin-3-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, ...
Authors:Santoni, G, De la Mora, E, de Souza, J, Silman, I, Sussman, J, Baati, R, Weik, M, Nachon, F.
Deposit date:2018-03-28
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structure-Based Optimization of Nonquaternary Reactivators of Acetylcholinesterase Inhibited by Organophosphorus Nerve Agents.
J. Med. Chem., 61, 2018
3RQS
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BU of 3rqs by Molmil
Crystal Structure of human L-3- Hydroxyacyl-CoA dehydrogenase (EC1.1.1.35) from mitochondria at the resolution 2.0 A, Northeast Structural Genomics Consortium Target HR487, Mitochondrial Protein Partnership
Descriptor: GLYCEROL, Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial
Authors:Kuzin, A, Su, M, Seetharaman, J, Patel, P, Xiao, R, Ciccosanti, C, Shastry, R, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG), Mitochondrial Protein Partnership (MPP)
Deposit date:2011-04-28
Release date:2011-05-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Northeast Structural Genomics Consortium Target HR487
To be published
6G53
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BU of 6g53 by Molmil
Cryo-EM structure of a late human pre-40S ribosomal subunit - State E
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R.
Deposit date:2018-03-28
Release date:2018-06-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Visualizing late states of human 40S ribosomal subunit maturation.
Nature, 558, 2018
3R2R
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BU of 3r2r by Molmil
1.65A resolution structure of Iron Soaked FtnA from Pseudomonas aeruginosa (pH 6.0)
Descriptor: Bacterioferritin, FE (III) ION, SODIUM ION, ...
Authors:Lovell, S.W, Battaile, K.P, Yao, H, Jepkorir, G, Nama, P.V, Weeratunga, S, Rivera, M.
Deposit date:2011-03-14
Release date:2011-05-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Two distinct ferritin-like molecules in Pseudomonas aeruginosa: the product of the bfrA gene is a bacterial ferritin (FtnA) and not a bacterioferritin (Bfr).
Biochemistry, 50, 2011
6RBX
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BU of 6rbx by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complexe with an adenine derivative
Descriptor: 3-(6-azanyl-8-bromanyl-purin-9-yl)propan-1-ol, CITRIC ACID, NAD kinase 1
Authors:Gelin, M, Labesse, G.
Deposit date:2019-04-11
Release date:2020-02-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:From Substrate to Fragments to Inhibitor ActiveIn VivoagainstStaphylococcus aureus.
Acs Infect Dis., 6, 2020
4J56
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BU of 4j56 by Molmil
Structure of Plasmodium falciparum thioredoxin reductase-thioredoxin complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin, Thioredoxin reductase 2
Authors:Fritz-Wolf, K, Jortzik, E, Stumpf, M, Preuss, J, Iozef, R, Rahlfs, S, Becker, K.
Deposit date:2013-02-08
Release date:2013-07-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.371 Å)
Cite:Crystal Structure of the Plasmodium falciparum Thioredoxin Reductase-Thioredoxin Complex.
J.Mol.Biol., 425, 2013
6G8B
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BU of 6g8b by Molmil
E. coli Aminopeptidase N solved by Native SAD from a dataset collected in 60 second with JUNGFRAU detector
Descriptor: Aminopeptidase N, DIMETHYL SULFOXIDE, SODIUM ION, ...
Authors:Leonarski, F, Olieric, V, Redford, S, Wang, M.
Deposit date:2018-04-08
Release date:2018-08-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.374 Å)
Cite:Fast and accurate data collection for macromolecular crystallography using the JUNGFRAU detector.
Nat. Methods, 15, 2018
4J6A
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BU of 4j6a by Molmil
Crystal structure of Ribonuclease A soaked in 40% 2,2,2-Trifluoroethanol: One of twelve in MSCS set
Descriptor: Ribonuclease pancreatic, SULFATE ION, TRIFLUOROETHANOL
Authors:Kearney, B.M, Dechene, M, Swartz, P.D, Mattos, C.
Deposit date:2013-02-11
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:DRoP: A program for analysis of water structure on protein surfaces
to be published
4N6P
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BU of 4n6p by Molmil
Crystal Structure of C-lobe of Bovine lactoferrin complexed with meclofenamic acid at 1.4 A resolution
Descriptor: 2-[(2,6-dichloro-3-methyl-phenyl)amino]benzoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gautam, L, Dube, D, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2013-10-14
Release date:2013-10-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structre of C-LOBE OF BOVINE LACTOFERRIN COMPLEXED WITH MECLOFENAMIC ACID AT 1.4 A RESOLUTION
TO BE PUBLISHED
4MZW
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BU of 4mzw by Molmil
CRYSTAL STRUCTURE OF NU-CLASS GLUTATHIONE TRANSFERASE YGHU FROM Streptococcus sanguinis SK36, COMPLEX WITH GLUTATHIONE DISULFIDE, TARGET EFI-507286
Descriptor: ACETATE ION, Glutathione S-Transferase, OXIDIZED GLUTATHIONE DISULFIDE
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Imker, H.J, Al Obaidi, N, Stead, M, Love, J, Gerlt, J.A, Armstrong, R.N, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-09-30
Release date:2013-10-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of Glutathione S-Transferase Yghu (Target Efi-507286)
To be Published
1KN7
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BU of 1kn7 by Molmil
Solution structure of the tandem inactivation domain (residues 1-75) of potassium channel RCK4 (Kv1.4)
Descriptor: VOLTAGE-GATED POTASSIUM CHANNEL PROTEIN KV1.4
Authors:Wissmann, R, Bildl, W, Oliver, D, Beyermann, M, Kalbitzer, H.R, Bentrop, D, Fakler, B.
Deposit date:2001-12-18
Release date:2003-05-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure and Function of the "Tandem Inactivation Domain" of the Neuronal A-type Potassium Channel Kv1.4
J.Biol.Chem., 278, 2003
4N7F
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BU of 4n7f by Molmil
Crystal structure of 3rd WW domain of human Nedd4-1
Descriptor: E3 ubiquitin-protein ligase NEDD4
Authors:Qi, S, O'Hayre, M, Gutkind, J.S, Hurley, J.
Deposit date:2013-10-15
Release date:2014-01-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.102 Å)
Cite:Structural and biochemical basis for ubiquitin ligase recruitment by arrestin-related domain-containing protein-3 (ARRDC3).
J.Biol.Chem., 289, 2014
3P9U
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BU of 3p9u by Molmil
Crystal structure of TetX2 from Bacteroides thetaiotaomicron with substrate analogue
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, TetX2 protein
Authors:Walkiewicz, K, Davlieva, M, Sun, C, Lau, K, Shamoo, Y.
Deposit date:2010-10-18
Release date:2011-04-27
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Crystal structure of Bacteroides thetaiotaomicron TetX2: a tetracycline degrading monooxygenase at 2.8 A resolution.
Proteins, 79, 2011
4N06
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BU of 4n06 by Molmil
Crystal structure of Cas1 from Archaeoglobus fulgidus and its nucleolytic activity
Descriptor: CRISPR-associated endonuclease Cas1 1
Authors:Kim, T.Y, Shin, M, Yen, L.H.T, Kim, J.S.
Deposit date:2013-10-01
Release date:2014-01-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Cas1 from Archaeoglobus fulgidus and characterization of its nucleolytic activity
Biochem.Biophys.Res.Commun., 441, 2013
6HDP
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Human DYRK2 bound to Scorzodihydrostilbene A
Descriptor: Dual specificity tyrosine-phosphorylation-regulated kinase 2, SODIUM ION, Scorzodihydrostilbene A
Authors:Elkins, J.M, Soundararajan, M, Proksch, P, Meijer, L, Vollmar, M, Krojer, T, Bountra, C, Edwards, A.M, Arrowsmith, C, Knapp, S.
Deposit date:2018-08-18
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:DYRK2 bound to Scorzodihydrostilbene A
To Be Published
3PB1
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BU of 3pb1 by Molmil
Crystal Structure of a Michaelis Complex between Plasminogen Activator Inhibitor-1 and Urokinase-type Plasminogen Activator
Descriptor: Plasminogen activator inhibitor 1, Plasminogen activator, urokinase, ...
Authors:Lin, Z, Jiang, L, Huang, M, Structure 2 Function Project (S2F)
Deposit date:2010-10-20
Release date:2010-12-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for recognition of urokinase-type plasminogen activator by plasminogen activator inhibitor-1.
J.Biol.Chem., 286, 2011
6QVK
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BU of 6qvk by Molmil
The cryo-EM structure of bacteriophage phi29 prohead
Descriptor: Capsid fiber protein, Major capsid protein
Authors:Xu, J, Gui, M, Xiang, Y.
Deposit date:2019-03-03
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
3CFO
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BU of 3cfo by Molmil
Triple Mutant APO structure
Descriptor: DNA polymerase, GUANOSINE, SULFATE ION
Authors:Wang, J, Klimenko, D, Wang, M, Steitz, T.A, Konigsberg, W.H.
Deposit date:2008-03-04
Release date:2009-03-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights into base selectivity from the structures of an RB69 DNA Polymerase triple mutant
To be Published

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