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PDB: 939 results

6KE1
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Crystal structure of TtCas1
Descriptor: CRISPR-associated endonuclease Cas1 2
Authors:Wang, Y.L, Li, J.Z, Yang, J, Wang, J.Y.
Deposit date:2019-07-03
Release date:2019-12-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.39 Å)
Cite:Crystal structure of Cas1 in complex with branched DNA.
Sci China Life Sci, 63, 2020
2ZJG
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BU of 2zjg by Molmil
Crystal structural of mouse kynurenine aminotransferase III
Descriptor: GLYCEROL, Kynurenine-oxoglutarate transaminase 3
Authors:Han, Q, Cai, T, Tagle, D.A, Robinson, H, Li, J.
Deposit date:2008-03-07
Release date:2009-01-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional characterization of mouse kynurenine aminotransferase III
To be Published
6KDV
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Crystal structure of TtCas1-DNA complex
Descriptor: CRISPR-associated endonuclease Cas1 2, DNA (5'-D(*GP*AP*GP*TP*CP*GP*AP*TP*GP*CP*TP*GP*GP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*CP*CP*AP*GP*CP*AP*TP*CP*GP*AP*CP*TP*C)-3')
Authors:Wang, Y.L, Li, J.Z, Yang, J, Wang, J.Y.
Deposit date:2019-07-02
Release date:2019-12-18
Last modified:2020-05-06
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Crystal structure of Cas1 in complex with branched DNA.
Sci China Life Sci, 63, 2020
2R5C
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Aedes Kynurenine Aminotransferase in Complex with Cysteine
Descriptor: Kynurenine aminotransferase, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-CYSTEINE
Authors:Han, Q, Gao, Y.G, Robinson, H, Li, J.
Deposit date:2007-09-03
Release date:2008-03-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural insight into the mechanism of substrate specificity of aedes kynurenine aminotransferase.
Biochemistry, 47, 2008
3QLE
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BU of 3qle by Molmil
Structural Basis for the Function of Tim50 in the Mitochondrial Presequence Translocase
Descriptor: ACETATE ION, CALCIUM ION, PENTAETHYLENE GLYCOL, ...
Authors:Qian, X.G, Gebert, M, Hpker, J, Yan, M, Li, J.Z, Wiedemann, N, Laan, M.V.D, Pfanner, N, Sha, B.D.
Deposit date:2011-02-02
Release date:2011-03-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.831 Å)
Cite:Structural basis for the function of tim50 in the mitochondrial presequence translocase.
J.Mol.Biol., 411, 2011
4GHT
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BU of 4ght by Molmil
Crystal structure of EV71 3C proteinase in complex with AG7088
Descriptor: 3C proteinase, 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE-3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER
Authors:Chen, C, Wu, C, Cai, Q, Li, N, Peng, X, Cai, Y, Yin, K, Chen, X, Wang, X, Zhang, R, Liu, L, Chen, S, Li, J, Lin, T.
Deposit date:2012-08-08
Release date:2013-06-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structures of Enterovirus 71 3C proteinase (strain E2004104-TW-CDC) and its complex with rupintrivir
Acta Crystallogr.,Sect.D, 69, 2013
4G5S
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BU of 4g5s by Molmil
Structure of LGN GL3/Galphai3 complex
Descriptor: CITRIC ACID, G-protein-signaling modulator 2, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Jia, M, Li, J, Zhu, J, Wen, W, Zhang, M, Wang, W.
Deposit date:2012-07-18
Release date:2012-09-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.62 Å)
Cite:Crystal Structures of the scaffolding protein LGN reveal the general mechanism by which GoLoco binding motifs inhibit the release of GDP from Galphai subunits in G-coupled heterotrimeric proteins
To be Published
2MI8
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Solution structure of lysine-free (K0) ubiquitin
Descriptor: Ubiquitin
Authors:Huang, T, Li, J.R, Byrd, A.R.
Deposit date:2013-12-09
Release date:2014-04-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of lysine-free (K0) ubiquitin.
Protein Sci., 23, 2014
4QBL
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BU of 4qbl by Molmil
VRR_NUC domain protein
Descriptor: MAGNESIUM ION, VRR-NUC
Authors:Smerdon, S.J, Pennell, S, Li, J.
Deposit date:2014-05-08
Release date:2014-09-10
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:FAN1 activity on asymmetric repair intermediates is mediated by an atypical monomeric virus-type replication-repair nuclease domain.
Cell Rep, 8, 2014
8HUR
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BU of 8hur by Molmil
Crystal structure of SARS-Cov-2 main protease in complex with S217622
Descriptor: 3C-like proteinase nsp5, 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione
Authors:Zhou, X.L, Zhang, J, Li, J.
Deposit date:2022-12-24
Release date:2023-06-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structural basis for the inhibition of coronaviral main proteases by ensitrelvir.
Structure, 31, 2023
8HUS
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Crystal structure of SARS main protease in complex with S217622
Descriptor: 3C-like proteinase nsp5, 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione
Authors:Lin, C, Zhang, J, Li, J.
Deposit date:2022-12-24
Release date:2023-06-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural basis for the inhibition of coronaviral main proteases by ensitrelvir.
Structure, 31, 2023
8HUV
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Crystal structure of SARS-Cov-2 main protease G15S mutant in complex with S217622
Descriptor: 3C-like proteinase nsp5, 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione
Authors:Zeng, P, Zhang, J, Li, J.
Deposit date:2022-12-24
Release date:2023-06-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural basis for the inhibition of coronaviral main proteases by ensitrelvir.
Structure, 31, 2023
8HUT
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Crystal structure of MERS main protease in complex with S217622
Descriptor: 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione, ORF1a
Authors:Lin, C, Zhang, J, Li, J.
Deposit date:2022-12-24
Release date:2023-06-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural basis for the inhibition of coronaviral main proteases by ensitrelvir.
Structure, 31, 2023
8HUU
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Crystal structure of HCoV-NL63 main protease with S217622
Descriptor: 3C-like proteinase, 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione
Authors:Zeng, X.Y, Zhang, J, Li, J.
Deposit date:2022-12-24
Release date:2023-06-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural basis for the inhibition of coronaviral main proteases by ensitrelvir.
Structure, 31, 2023
6V4P
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BU of 6v4p by Molmil
Structure of the integrin AlphaIIbBeta3-Abciximab complex
Descriptor: Abciximab, heavy chain, light chain, ...
Authors:Nesic, D, Zhang, Y, Spasic, A, Li, J, Provasi, D, Filizola, M, Walz, T, Coller, B.S.
Deposit date:2019-11-28
Release date:2020-02-05
Last modified:2020-03-11
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-Electron Microscopy Structure of the alpha IIb beta 3-Abciximab Complex.
Arterioscler Thromb Vasc Biol., 40, 2020
5ET1
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BU of 5et1 by Molmil
Crystal structure of Myo3b-ARB1 in complex with Espin1-AR
Descriptor: Espin, GLYCEROL, Myosin-IIIb
Authors:Liu, H, Li, J, liu, W, Zhang, M.
Deposit date:2015-11-17
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Myosin III-mediated cross-linking and stimulation of actin bundling activity of Espin
Elife, 5, 2016
8HQI
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BU of 8hqi by Molmil
Crystal structure of SARS-Cov-2 main protease P132H mutant in complex with inhibitor YH-53
Descriptor: 3C-like proteinase nsp5, N-[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-methoxy-1H-indole-2-carboxamide
Authors:Li, W.W, Zhang, J, Li, J.
Deposit date:2022-12-13
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of SARS-Cov-2 main protease P132H mutant in complex with inhibitor YH-53
To Be Published
8HVN
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Crystal structure of SARS-Cov-2 main protease P132H mutant in complex with PF07321332
Descriptor: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5
Authors:Li, W.W, Zhang, J, Li, J.
Deposit date:2022-12-27
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of SARS-Cov-2 main protease P132H mutant in complex with PF07321332
To Be Published
1YIZ
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BU of 1yiz by Molmil
Aedes aegypti kynurenine aminotrasferase
Descriptor: BROMIDE ION, kynurenine aminotransferase; glutamine transaminase
Authors:Han, Q, Gao, Y.G, Robinson, H, Ding, H, Wilson, S, Li, J.
Deposit date:2005-01-13
Release date:2005-05-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structures of Aedes aegypti kynurenine aminotransferase.
FEBS J., 272, 2005
5JHH
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BU of 5jhh by Molmil
Crystal structure of the ternary complex between the human RhoA, its inhibitor and the DH/PH domain of human ARHGEF11
Descriptor: 3-{3-[ethyl(quinolin-2-yl)amino]phenyl}propanoic acid, GLYCEROL, Rho guanine nucleotide exchange factor 11, ...
Authors:Lv, Z, Wang, R, Ma, L, Miao, Q, Wu, J, Yan, Z, Li, J, Miao, L, Wang, F.
Deposit date:2016-04-21
Release date:2017-04-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallization and preliminary X-ray crystallographic analysis of a small GTPase RhoA bound with its inhibitor and PDZRhoGEF
To Be Published
8IPT
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BU of 8ipt by Molmil
Cryo-EM structure of heme transporter CydDC from Escherichia coli in the occluded ATP bound state
Descriptor: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC, ...
Authors:Zhu, C, Li, J.
Deposit date:2023-03-14
Release date:2023-06-14
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structures of a prokaryotic heme transporter CydDC.
Protein Cell, 14, 2023
8IPS
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BU of 8ips by Molmil
Cryo-EM structure of heme transporter CydDC from Escherichia coli in the inward facing heme loading state
Descriptor: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC, ...
Authors:Zhu, C, Li, J.
Deposit date:2023-03-14
Release date:2023-06-14
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structures of a prokaryotic heme transporter CydDC.
Protein Cell, 14, 2023
8IPQ
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Cryo-EM structure of heme transporter CydDC from Mycobacterium smegmatis in the inward facing apo state
Descriptor: Component linked with the assembly of cytochrome' ABC transporter ATP-binding protein CydC, Transmembrane ATP-binding protein ABC transporter cydD
Authors:Zhu, C, Li, J.
Deposit date:2023-03-14
Release date:2023-06-14
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structures of a prokaryotic heme transporter CydDC.
Protein Cell, 14, 2023
5WQT
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BU of 5wqt by Molmil
Structure of a protein involved in pyroptosis
Descriptor: CITRIC ACID, GLYCEROL, Gasdermin-D
Authors:Kuang, S, Li, J.
Deposit date:2016-11-28
Release date:2017-10-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structure insight of GSDMD reveals the basis of GSDMD autoinhibition in cell pyroptosis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8IMG
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BU of 8img by Molmil
Human cGAS catalytic domain bound with C20
Descriptor: 2-[2-hydroxy-2-oxoethyl-[3-(7-methoxy-4-methyl-2-oxidanylidene-chromen-3-yl)propanoyl]amino]ethanoic acid, Cyclic GMP-AMP synthase, ZINC ION
Authors:Zhao, W.F, Li, J.M, Xu, Y.C.
Deposit date:2023-03-06
Release date:2024-01-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of novel cGAS inhibitors based on natural flavonoids.
Bioorg.Chem., 140, 2023

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PDB entries from 2024-07-10

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