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PDB: 508 results

4ROV
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BU of 4rov by Molmil
The crystal structure of novel APOBEC3G CD2 head-to-tail dimer suggests the binding mode of full-length APOBEC3G to HIV-1 ssDNA
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Lu, X, Zhang, T, Xu, Z, Liu, S, Zhao, B, Lan, W, Wang, C, Ding, J, Cao, C.
Deposit date:2014-10-29
Release date:2014-12-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of DNA cytidine deaminase ABOBEC3G catalytic deamination domain suggests a binding mode of full-length enzyme to single-stranded DNA
J.Biol.Chem., 290, 2015
4ROW
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BU of 4row by Molmil
The crystal structure of novel APOBEC3G CD2 head-to-tail dimer suggests the binding mode of full-length APOBEC3G to HIV-1 ssDNA
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Lu, X, Zhang, T, Xu, Z, Liu, S, Zhao, B, Lan, W, Wang, C, Ding, J, Cao, C.
Deposit date:2014-10-29
Release date:2014-12-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of DNA cytidine deaminase ABOBEC3G catalytic deamination domain suggests a binding mode of full-length enzyme to single-stranded DNA
J.Biol.Chem., 290, 2015
2MY5
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BU of 2my5 by Molmil
Solution Structure of KstB-PCP in kosinostatin biosynthesis
Descriptor: N~3~-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-(2-sulfanylethyl)-beta-alaninamide, Peptidyl carrier protein
Authors:Zhao, B, Lan, W, Wang, C, Tang, G, Cao, C.
Deposit date:2015-01-20
Release date:2016-01-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:1H and 15N Assigned Chemical Shifts for KstB-PCP
To be Published
2MY6
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BU of 2my6 by Molmil
Structure of KstB-PCP(apo)
Descriptor: Peptidyl carrier protein
Authors:Zhao, B, Lan, W, Wang, C, Tang, G, Cao, C.
Deposit date:2015-01-20
Release date:2016-01-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:1H and 15N Assigned Chemical Shifts for KstB-PCP
To be Published
8KFL
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BU of 8kfl by Molmil
Stable G-quadruplex Conformation Formed in Promoter Region of Oncogene RET in 100 mM Na+
Descriptor: DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*G)-3')
Authors:Zhang, Y.P, Lan, W.X, Yin, S.W, Liu, Z.J, Xue, H.J, Cao, C.Y.
Deposit date:2023-08-15
Release date:2024-09-04
Method:SOLUTION NMR
Cite:Stable G-quadruplex Conformation Formed in Promoter Region of Oncogene RET Indicates New Target for Anti-cancer Drug Screening
To Be Published
8KF9
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BU of 8kf9 by Molmil
Stable G-quadruplex Conformation Formed in Promoter Region of Oncogene RET in 50 mM K+ solution
Descriptor: DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*G)-3')
Authors:Zhang, Y.P, Lan, W.X, Yin, S.W, Liu, Z.J, Xue, H.J, Cao, C.Y.
Deposit date:2023-08-15
Release date:2024-09-04
Method:SOLUTION NMR
Cite:Stable G-quadruplex Conformation Formed in Promoter Region of Oncogene RET Indicates New Target for Anti-cancer Drug Screening
To Be Published
4LRV
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BU of 4lrv by Molmil
Crystal structure of DndE from Escherichia coli B7A involved in DNA phosphorothioation modification
Descriptor: DNA sulfur modification protein DndE
Authors:Hu, W, Wang, C.K, Liang, J.D, Zhang, T.L, Yang, M, Hu, Z.P, Wang, Z.J, Lan, W.X, Wu, H.M, Ding, J.P, Wu, G, Deng, Z.X, Cao, C.
Deposit date:2013-07-21
Release date:2013-08-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into DndE from Escherichia coli B7A involved in DNA phosphorothioation modification
Cell Res., 22, 2012
5ZVB
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BU of 5zvb by Molmil
APOBEC3F Chimeric Catalytic Domain in Complex with DNA(dT9)
Descriptor: APEBEC3F/ssDNA-T9, CACODYLATE ION, DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*T)-3'), ...
Authors:Cheng, C, Zhang, T.L, Wang, C.X, Lan, W.X, Ding, J.P, Cao, C.Y.
Deposit date:2018-05-09
Release date:2018-11-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Cytidine Deaminase Human APOBEC3F Chimeric Catalytic Domain in Complex with DNA
Chin.J.Chem., 36, 2018
5ZEV
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BU of 5zev by Molmil
Solution structure of G-quadruplex formed in vegfr-2 proximal promoter sequence
Descriptor: DNA (5'-D(*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*GP*TP*GP*AP*GP*GP*TP*GP*CP*GP*GP*GP*GP*T)-3')
Authors:Liu, Y, Lan, W.X.
Deposit date:2018-02-28
Release date:2018-04-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A putative G-quadruplex structure in the proximal promoter ofVEGFR-2has implications for drug design to inhibit tumor angiogenesis.
J. Biol. Chem., 293, 2018
5ZVA
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BU of 5zva by Molmil
APOBEC3F Chimeric Catalytic Domain in Complex with DNA(dC9)
Descriptor: APEBEC3F/ssDNA-C9, CACODYLATE ION, DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*CP*T)-3'), ...
Authors:Cheng, C, Zhang, T.L, Wang, C.X, Lan, W.X, Ding, J.P, Cao, C.Y.
Deposit date:2018-05-09
Release date:2018-11-21
Last modified:2018-11-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Cytidine Deaminase Human APOBEC3F Chimeric Catalytic Domain in Complex with DNA
Chin.J.Chem., 36, 2018
6JWE
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BU of 6jwe by Molmil
structure of RET G-quadruplex in complex with colchicine
Descriptor: DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3'), N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide
Authors:Wang, F, Wang, C, Liu, Y, Lan, W.X, Li, Y.M, Wang, R.X, Cao, C.
Deposit date:2019-04-20
Release date:2020-02-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Colchicine selective interaction with oncogene RET G-quadruplex revealed by NMR.
Chem.Commun.(Camb.), 56, 2020
6JWD
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BU of 6jwd by Molmil
structure of RET G-quadruplex in complex with berberine
Descriptor: BERBERINE, DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3')
Authors:Wang, F, Wang, C, Liu, Y, Lan, W.X, Li, Y.M, Wang, R.X, Cao, C.
Deposit date:2019-04-19
Release date:2020-04-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Colchicine selective interaction with oncogene RET G-quadruplex revealed by NMR.
Chem.Commun.(Camb.), 56, 2020
5JGK
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BU of 5jgk by Molmil
Crystal structure of GtmA in complex with SAH
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, UbiE/COQ5 family methyltransferase, ...
Authors:Dolan, S.K, Bock, T, Hering, V, Jones, G.W, Blankenfeldt, W, Dolye, S.
Deposit date:2016-04-20
Release date:2017-03-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Structural, mechanistic and functional insight into gliotoxinbis-thiomethylation inAspergillus fumigatus.
Open Biol, 7, 2017
5Y7L
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BU of 5y7l by Molmil
Solution structure of Hbeta4 extracellular loop of BK potassium channel
Descriptor: Calcium-activated potassium channel subunit beta-4
Authors:Wang, Y, Lan, W, Ding, J, Cao, C.
Deposit date:2017-08-17
Release date:2018-08-01
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of extracellular loop of human beta 4 subunit of BK channel and its biological implication on ChTX sensitivity.
Sci Rep, 8, 2018
7D3V
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BU of 7d3v by Molmil
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
Descriptor: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
Authors:Cao, C.Y, Liu, Y.P, Lan, W.X.
Deposit date:2020-09-21
Release date:2021-10-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3
To Be Published
7D3W
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BU of 7d3w by Molmil
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
Descriptor: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
Authors:Cao, C, Liu, Y, Lan, W.
Deposit date:2020-09-21
Release date:2021-10-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Two different kinds of interaction modes of deaminase APOBEC3A with single-stranded DNA in solution detected by nuclear magnetic resonance.
Protein Sci., 31, 2022
6K3K
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BU of 6k3k by Molmil
Solution structure of APOBEC3G-CD2 with ssDNA, Product B
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), ZINC ION
Authors:Cao, C, Yan, X, Lan, W, Wang, C.
Deposit date:2019-05-19
Release date:2019-06-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Investigations on the Interactions between Cytidine Deaminase Human APOBEC3G and DNA.
Chem Asian J, 14, 2019
6K3J
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BU of 6k3j by Molmil
Solution structure of APOBEC3G-CD2 with ssDNA, Product A
Descriptor: DNA (5'-D(*AP*TP*TP*CP*UP*(IUR)P*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Cao, C, Yan, X, Lan, W, Wang, C.
Deposit date:2019-05-19
Release date:2019-06-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Investigations on the Interactions between Cytidine Deaminase Human APOBEC3G and DNA.
Chem Asian J, 14, 2019
5IAY
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BU of 5iay by Molmil
NMR structure of UHRF1 Tandem Tudor Domains in a complex with Spacer peptide
Descriptor: E3 ubiquitin-protein ligase UHRF1, Spacer
Authors:Fang, J, Cheng, J, Wang, J, Zhang, Q, Liu, M, Gong, R, Wang, P, Zhang, X, Feng, Y, Lan, W, Gong, Z, Tang, C, Wong, J, Yang, H, Cao, C, Xu, Y.
Deposit date:2016-02-22
Release date:2016-04-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Hemi-methylated DNA opens a closed conformation of UHRF1 to facilitate its histone recognition
Nat Commun, 7, 2016
8HPB
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BU of 8hpb by Molmil
NMR Structure of OsCIE1-Ubox S237D mutant
Descriptor: U-box domain-containing protein 12
Authors:Zhang, Y, Yu, C.Z, Lan, W.X.
Deposit date:2022-12-12
Release date:2023-12-20
Last modified:2024-06-12
Method:SOLUTION NMR
Cite:Release of a ubiquitin brake activates OsCERK1-triggered immunity in rice.
Nature, 629, 2024
8HQB
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BU of 8hqb by Molmil
NMR Structure of OsCIE1-Ubox
Descriptor: U-box domain-containing protein 12
Authors:Zhang, Y, Yu, C.Z, Lan, W.X.
Deposit date:2022-12-13
Release date:2023-12-20
Last modified:2024-06-12
Method:SOLUTION NMR
Cite:Release of a ubiquitin brake activates OsCERK1-triggered immunity in rice.
Nature, 629, 2024
4ZA1
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BU of 4za1 by Molmil
Crystal Structure of NosA Involved in Nosiheptide Biosynthesis
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, NosA
Authors:Liu, S, Guo, H, Zhang, T, Han, L, Yao, P, Zhang, Y, Rong, N, Yu, Y, Lan, W, Wang, C, Ding, J, Wang, R, Liu, W, Cao, C.
Deposit date:2015-04-13
Release date:2015-08-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-based Mechanistic Insights into Terminal Amide Synthase in Nosiheptide-Represented Thiopeptides Biosynthesis
Sci Rep, 5, 2015
4WB0
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BU of 4wb0 by Molmil
Crystal structure of the broad specificity aminotransferase from Leishmania mexicana
Descriptor: Broad specificity aminotransferase, CACODYLATE ION
Authors:Wen, J, Nowicki, C, Blankenfeldt, W.
Deposit date:2014-09-02
Release date:2015-09-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural basis for the relaxed substrate selectivity of Leishmania mexicana broad specificity aminotransferase.
Mol.Biochem.Parasitol., 202, 2015
5IWE
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BU of 5iwe by Molmil
E45Q mutant of phenazine biosynthesis protein PhzF in complex with (5R,6R)-6-azaniumyl-5-ethoxycyclohexa-1,3-diene-1-carboxylate
Descriptor: (5R,6R)-6-azaniumyl-5-ethoxycyclohexa-1,3-diene-1-carboxylate, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Diederich, C, Blankenfeldt, W.
Deposit date:2016-03-22
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Mechanisms and Specificity of Phenazine Biosynthesis Protein PhzF.
Sci Rep, 7, 2017
5JBX
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BU of 5jbx by Molmil
Crystal structure of LiuC in complex with coenzyme A and malonic acid
Descriptor: 3-hydroxybutyryl-CoA dehydratase, COENZYME A, MALONATE ION
Authors:Bock, T, Reichelt, J, Mueller, R, Blankenfeldt, W.
Deposit date:2016-04-14
Release date:2016-06-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The Structure of LiuC, a 3-Hydroxy-3-Methylglutaconyl CoA Dehydratase Involved in Isovaleryl-CoA Biosynthesis in Myxococcus xanthus, Reveals Insights into Specificity and Catalysis.
Chembiochem, 17, 2016

226707

數據於2024-10-30公開中

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