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PDB: 47 件

2JJ4
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The complex of PII and acetylglutamate kinase from Synechococcus elongatus PCC7942
分子名称: ACETYLGLUTAMATE KINASE, N-ACETYL-L-GLUTAMATE, NITROGEN REGULATORY PROTEIN P-II
著者Llacer, J.L, Marco-Marin, C, Gil-Ortiz, F, Fita, I, Rubio, V.
登録日2007-07-04
公開日2007-10-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.46 Å)
主引用文献The Crystal Structure of the Complex of Pii and Acetylglutamate Kinase Reveals How Pii Controls the Storage of Nitrogen as Arginine
Proc.Natl.Acad.Sci.USA, 104, 2007
6QG1
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Structure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model 2)
分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ...
著者Llacer, J.L, Gordiyenko, Y, Ramakrishnan, V.
登録日2019-01-10
公開日2019-06-26
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural basis for the inhibition of translation through eIF2 alpha phosphorylation.
Nat Commun, 10, 2019
6QG2
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Structure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model A)
分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ...
著者Llacer, J.L, Gordiyenko, Y, Ramakrishnan, V.
登録日2019-01-10
公開日2019-06-26
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural basis for the inhibition of translation through eIF2 alpha phosphorylation.
Nat Commun, 10, 2019
6QG6
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BU of 6qg6 by Molmil
Structure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model D)
分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ...
著者Llacer, J.L, Gordiyenko, Y, Ramakrishnan, V.
登録日2019-01-10
公開日2019-06-26
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (10.4 Å)
主引用文献Structural basis for the inhibition of translation through eIF2 alpha phosphorylation.
Nat Commun, 10, 2019
6QG0
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Structure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model 1)
分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ...
著者Llacer, J.L, Gordiyenko, Y, Ramakrishnan, V.
登録日2019-01-10
公開日2019-06-26
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (4.15 Å)
主引用文献Structural basis for the inhibition of translation through eIF2 alpha phosphorylation.
Nat Commun, 10, 2019
6QG3
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Structure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model B)
分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ...
著者Llacer, J.L, Gordiyenko, Y, Ramakrishnan, V.
登録日2019-01-10
公開日2019-06-26
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (9.4 Å)
主引用文献Structural basis for the inhibition of translation through eIF2 alpha phosphorylation.
Nat Commun, 10, 2019
6QG5
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Structure of eIF2B-eIF2 (phosphorylated at Ser51) complex (model C)
分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ...
著者Llacer, J.L, Gordiyenko, Y, Ramakrishnan, V.
登録日2019-01-10
公開日2019-06-26
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (10.1 Å)
主引用文献Structural basis for the inhibition of translation through eIF2 alpha phosphorylation.
Nat Commun, 10, 2019
6GSN
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BU of 6gsn by Molmil
Structure of a partial yeast 48S preinitiation complex in closed conformation
分子名称: 18S rRNA (1798-MER), 40S ribosomal protein S0, 40S ribosomal protein S1, ...
著者Llacer, J.L, Hussain, T, Ramakrishnan, V.
登録日2018-06-14
公開日2019-06-26
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (5.75 Å)
主引用文献Large-scale movement of eIF3 domains during translation initiation modulate start codon selection.
Nucleic Acids Res., 2021
6GSM
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Structure of a partial yeast 48S preinitiation complex in open conformation.
分子名称: 18S ribosomal RNA, 40S ribosomal protein S0, 40S ribosomal protein S1, ...
著者Llacer, J.L, Hussain, T, Gordiyenko, Y, Ramakrishnan, V.
登録日2018-06-14
公開日2019-07-31
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (5.15 Å)
主引用文献Large-scale movement of eIF3 domains during translation initiation modulate start codon selection.
Nucleic Acids Res., 2021
6FYY
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Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)
分子名称: 18S ribosomal RNA, 40S ribosomal protein S0, 40S ribosomal protein S1, ...
著者Llacer, J.L, Hussain, T, Gordiyenko, Y, Ramakrishnan, V.
登録日2018-03-12
公開日2018-12-05
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Translational initiation factor eIF5 replaces eIF1 on the 40S ribosomal subunit to promote start-codon recognition.
Elife, 7, 2018
6FYX
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Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1)
分子名称: 18S ribosomal RNA, 40S ribosomal protein S0, 40S ribosomal protein S1, ...
著者Llacer, J.L, Hussain, T, Gordiyenko, Y, Ramakrishnan, V.
登録日2018-03-12
公開日2018-12-05
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Translational initiation factor eIF5 replaces eIF1 on the 40S ribosomal subunit to promote start-codon recognition.
Elife, 7, 2018
2V5H
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BU of 2v5h by Molmil
Controlling the storage of nitrogen as arginine: the complex of PII and acetylglutamate kinase from Synechococcus elongatus PCC 7942
分子名称: ACETYLGLUTAMATE KINASE, CHLORIDE ION, GLYCEROL, ...
著者Llacer, J.L, Marco-Marin, C, Gil-Ortiz, F, Fita, I, Rubio, V.
登録日2007-07-04
公開日2007-10-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献The Crystal Structure of the Complex of Pii and Acetylglutamate Kinase Reveals How Pii Controls the Storage of Nitrogen as Arginine.
Proc.Natl.Acad.Sci.USA, 104, 2007
2XKO
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Crystal structure of the complex of NtcA with its transcriptional co- activator PipX
分子名称: 2-OXOGLUTARIC ACID, GLOBAL NITROGEN REGULATOR, PIPX
著者Llacer, J.L, Castells, M.A, Rubio, V.
登録日2010-07-11
公開日2010-08-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural Basis for the Regulation of Ntca-Dependent Transcription by Proteins Pipx and Pii.
Proc.Natl.Acad.Sci.USA, 107, 2010
2XHK
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BU of 2xhk by Molmil
Crystal structure of transcription factor NtcA from Synechococcus elongatus bound to 2-oxoglutarate
分子名称: 2-OXOGLUTARIC ACID, GLOBAL NITROGEN REGULATOR
著者Llacer, J.L, Castells, M.A, Rubio, V.
登録日2010-06-17
公開日2010-08-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis for the Regulation of Ntca-Dependent Transcription by Proteins Pipx and Pii.
Proc.Natl.Acad.Sci.USA, 107, 2010
2XG8
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BU of 2xg8 by Molmil
Structural basis of gene regulation by protein PII: The crystal complex of PII and PipX from Synechococcus elongatus PCC 7942
分子名称: NITROGEN REGULATORY PROTEIN P-II, PIPX
著者Llacer, J.L, Rubio, V.
登録日2010-06-01
公開日2010-08-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural Basis for the Regulation of Ntca-Dependent Transcription by Proteins Pipx and Pii.
Proc.Natl.Acad.Sci.USA, 107, 2010
2XKP
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BU of 2xkp by Molmil
NtcA from Synechococcus elongatus: active and inactive
分子名称: 2-OXOGLUTARIC ACID, GLOBAL NITROGEN REGULATOR
著者Llacer, J.L, Castells, M.A, Rubio, V.
登録日2010-07-11
公開日2010-08-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural Basis for the Regulation of Ntca-Dependent Transcription by Proteins Pipx and Pii.
Proc.Natl.Acad.Sci.USA, 107, 2010
2XGX
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BU of 2xgx by Molmil
Crystal structure of transcription factor NtcA from Synechococcus elongatus (mercury derivative)
分子名称: 2-OXOGLUTARIC ACID, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLOBAL NITROGEN REGULATOR, ...
著者Llacer, J.L, Castells, M.A, Rubio, V.
登録日2010-06-08
公開日2010-08-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural Basis for the Regulation of Ntca-Dependent Transcription by Proteins Pipx and Pii.
Proc.Natl.Acad.Sci.USA, 107, 2010
3JAM
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BU of 3jam by Molmil
CryoEM structure of 40S-eIF1A-eIF1 complex from yeast
分子名称: 18S rRNA, MAGNESIUM ION, RACK1, ...
著者Llacer, J.L, Hussain, T, Ramakrishnan, V.
登録日2015-06-17
公開日2015-08-12
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex.
Mol.Cell, 59, 2015
3JAP
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BU of 3jap by Molmil
Structure of a partial yeast 48S preinitiation complex in closed conformation
分子名称: 18S rRNA, MAGNESIUM ION, METHIONINE, ...
著者Llacer, J.L, Hussain, T, Ramakrishnan, V.
登録日2015-06-18
公開日2015-08-12
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex.
Mol.Cell, 59, 2015
2JER
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BU of 2jer by Molmil
Agmatine deiminase of Enterococcus faecalis catalyzing its reaction.
分子名称: AGMATINE DEIMINASE
著者Tavarez, S, Llacer, J.L, Rubio, V.
登録日2007-01-19
公開日2007-01-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The Gene Cluster for Agmatine Catabolism of Enterococcus Faecalis: Study of Recombinant Putrescine Transcarbamylase and Agmatine Deiminase and a Snapshot of Agmatine Deiminase Catalyzing its Reaction.
J.Bacteriol., 189, 2007
7QDG
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SARS-CoV-2 S protein S:A222V + S:D614G mutant 1-up
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ginex, T, Marco-Marin, C, Wieczor, M, Mata, C.P, Krieger, J, Lopez-Redondo, M.L, Frances-Gomez, C, Ruiz-Rodriguez, P, Melero, R, Sanchez-Sorzano, C.O, Martinez, M, Gougeard, N, Forcada-Nadal, A, Zamora-Caballero, S, Gozalbo-Rovira, R, Sanz-Frasquet, C, Bravo, J, Rubio, V, Marina, A, Geller, R, Comas, I, Gil, C, Coscolla, M, Orozco, M, LLacer, J.L, Carazo, J.M.
登録日2021-11-27
公開日2022-05-25
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: The case of the spike A222V mutation.
Plos Pathog., 18, 2022
7QDH
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BU of 7qdh by Molmil
SARS-CoV-2 S protein S:D614G mutant 1-up
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin
著者Ginex, T, Marco-Marin, C, Wieczor, M, Mata, C.P, Krieger, J, Lopez-Redondo, M.L, Frances-Gomez, C, Ruiz-Rodriguez, P, Melero, R, Sanchez-Sorzano, C.O, Martinez, M, Gougeard, N, Forcada-Nadal, A, Zamora-Caballero, S, Gozalbo-Rovira, R, Sanz-Frasquet, C, Bravo, J, Rubio, V, Marina, A, Geller, R, Comas, I, Gil, C, Coscolla, M, Orozco, M, LLacer, J.L, Carazo, J.M.
登録日2021-11-27
公開日2022-05-25
最終更新日2022-08-10
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: The case of the spike A222V mutation.
Plos Pathog., 18, 2022
5LMT
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BU of 5lmt by Molmil
Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-3)
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
登録日2016-08-01
公開日2016-10-05
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (4.15 Å)
主引用文献Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
5LMN
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BU of 5lmn by Molmil
Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1A)
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
登録日2016-08-01
公開日2016-10-05
最終更新日2019-10-02
実験手法ELECTRON MICROSCOPY (3.55 Å)
主引用文献Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
5LMU
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BU of 5lmu by Molmil
Structure of bacterial 30S-IF3-mRNA-tRNA translation pre-initiation complex, closed form (state-4)
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
登録日2016-08-01
公開日2016-10-05
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016

 

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