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PDB: 13 results

2BMU
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BU of 2bmu by Molmil
UMP KINASE FROM PYROCOCCUS FURIOSUS COMPLEXED WITH ITS SUBSTRATE UMP AND ITS SUBSTRATE ANALOG AMPPNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, URIDINE-5'-MONOPHOSPHATE, ...
Authors:Marco-Marin, C, Gil-Ortiz, F, Rubio, V.
Deposit date:2005-03-16
Release date:2005-07-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The Crystal Structure of Pyrococcus Furiosus Ump Kinase Provides Insight Into Catalysis and Regulation in Microbial Pyrimidine Nucleotide Biosynthesis.
J.Mol.Biol., 352, 2005
2BRI
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BU of 2bri by Molmil
UMP KINASE FROM PYROCOCCUS FURIOSUS COMPLEXED WITH ITS SUBSTRATE ANALOG AMPPNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, URIDYLATE KINASE
Authors:Marco-Marin, C, Gil-Ortiz, F, Rubio, V.
Deposit date:2005-05-05
Release date:2005-07-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Crystal Structure of Pyrococcus Furiosus Ump Kinase Provides Insight Into Catalysis and Regulation in Microbial Pyrimidine Nucleotide Biosynthesis.
J.Mol.Biol., 352, 2005
2BRX
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BU of 2brx by Molmil
UMP KINASE FROM PYROCOCCUS FURIOSUS WITHOUT LIGANDS
Descriptor: URIDYLATE KINASE
Authors:Marco-Marin, C, Gil-Ortiz, F, Rubio, V.
Deposit date:2005-05-11
Release date:2005-07-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Crystal Structure of Pyrococcus Furiosus Ump Kinase Provides Insight Into Catalysis and Regulation in Microbial Pyrimidine Nucleotide Biosynthesis.
J.Mol.Biol., 352, 2005
2JI5
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BU of 2ji5 by Molmil
Structure of UMP kinase from Pyrococcus furiosus complexed with UTP
Descriptor: URIDINE 5'-TRIPHOSPHATE, URIDYLATE KINASE
Authors:Marco-Marin, C, Rubio, V.
Deposit date:2007-02-26
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The Structure of Ump Kinase from Pyrococcus Furiosus Complexed with Utp
To be Published
2J5T
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BU of 2j5t by Molmil
Glutamate 5-kinase from Escherichia coli complexed with glutamate
Descriptor: CHLORIDE ION, GLUTAMATE 5-KINASE, GLUTAMIC ACID, ...
Authors:Marco-Marin, C, Gil-Ortiz, F, Perez-Arellano, I, Cervera, J, Fita, I, Rubio, V.
Deposit date:2006-09-19
Release date:2007-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A Novel Two-Domain Architecture within the Amino Acid Kinase Enzyme Family Revealed by the Crystal Structure of Escherichia Coli Glutamate 5-Kinase.
J.Mol.Biol., 367, 2007
2J5V
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BU of 2j5v by Molmil
GLUTAMATE 5-KINASE FROM ESCHERICHIA COLI COMPLEXED WITH GLUTAMYL-5-PHOSPHATE AND PYROGLUTAMIC ACID
Descriptor: GAMMA-GLUTAMYL PHOSPHATE, GLUTAMATE 5-KINASE, MAGNESIUM ION, ...
Authors:Marco-Marin, C, Gil-Ortiz, F, Perez-Arellano, I, Cervera, J, Fita, I, Rubio, V.
Deposit date:2006-09-19
Release date:2007-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Novel Two-Domain Architecture within the Amino Acid Kinase Enzyme Family Revealed by the Crystal Structure of Escherichia Coli Glutamate 5-Kinase.
J.Mol.Biol., 367, 2007
7QDG
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BU of 7qdg by Molmil
SARS-CoV-2 S protein S:A222V + S:D614G mutant 1-up
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ginex, T, Marco-Marin, C, Wieczor, M, Mata, C.P, Krieger, J, Lopez-Redondo, M.L, Frances-Gomez, C, Ruiz-Rodriguez, P, Melero, R, Sanchez-Sorzano, C.O, Martinez, M, Gougeard, N, Forcada-Nadal, A, Zamora-Caballero, S, Gozalbo-Rovira, R, Sanz-Frasquet, C, Bravo, J, Rubio, V, Marina, A, Geller, R, Comas, I, Gil, C, Coscolla, M, Orozco, M, LLacer, J.L, Carazo, J.M.
Deposit date:2021-11-27
Release date:2022-05-25
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: The case of the spike A222V mutation.
Plos Pathog., 18, 2022
7QDH
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BU of 7qdh by Molmil
SARS-CoV-2 S protein S:D614G mutant 1-up
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin
Authors:Ginex, T, Marco-Marin, C, Wieczor, M, Mata, C.P, Krieger, J, Lopez-Redondo, M.L, Frances-Gomez, C, Ruiz-Rodriguez, P, Melero, R, Sanchez-Sorzano, C.O, Martinez, M, Gougeard, N, Forcada-Nadal, A, Zamora-Caballero, S, Gozalbo-Rovira, R, Sanz-Frasquet, C, Bravo, J, Rubio, V, Marina, A, Geller, R, Comas, I, Gil, C, Coscolla, M, Orozco, M, LLacer, J.L, Carazo, J.M.
Deposit date:2021-11-27
Release date:2022-05-25
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: The case of the spike A222V mutation.
Plos Pathog., 18, 2022
8P99
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BU of 8p99 by Molmil
SARS-CoV-2 S-protein:D614G mutant in 1-up conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1,Spike glycoprotein
Authors:Adhav, A, Forcada-Nadal, A, Marco-Marin, C, Lopez-Redondo, M.L, Llacer, J.L.
Deposit date:2023-06-05
Release date:2023-09-27
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:C-2 Thiophenyl Tryptophan Trimers Inhibit Cellular Entry of SARS-CoV-2 through Interaction with the Viral Spike (S) Protein.
J.Med.Chem., 66, 2023
8P9Y
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BU of 8p9y by Molmil
SARS-CoV-2 S protein S:D614G mutant in 3-down with binding site of an entry inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, ...
Authors:Adhav, A, Forcada-Nadal, A, Marco-Marin, C, Lopez-Redondo, M.L, Llacer, J.L.
Deposit date:2023-06-06
Release date:2023-09-27
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:C-2 Thiophenyl Tryptophan Trimers Inhibit Cellular Entry of SARS-CoV-2 through Interaction with the Viral Spike (S) Protein.
J.Med.Chem., 66, 2023
2V5H
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BU of 2v5h by Molmil
Controlling the storage of nitrogen as arginine: the complex of PII and acetylglutamate kinase from Synechococcus elongatus PCC 7942
Descriptor: ACETYLGLUTAMATE KINASE, CHLORIDE ION, GLYCEROL, ...
Authors:Llacer, J.L, Marco-Marin, C, Gil-Ortiz, F, Fita, I, Rubio, V.
Deposit date:2007-07-04
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The Crystal Structure of the Complex of Pii and Acetylglutamate Kinase Reveals How Pii Controls the Storage of Nitrogen as Arginine.
Proc.Natl.Acad.Sci.USA, 104, 2007
2W21
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BU of 2w21 by Molmil
Crystal structure of the aminoacid kinase domain of the glutamate 5 kinase of Escherichia coli.
Descriptor: GLUTAMATE 5-KINASE, SULFATE ION
Authors:Perez-Arellano, I, Gil-Ortiz, F, Marco-Marin, C, Cervera, J, Rubio, V.
Deposit date:2008-10-21
Release date:2009-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The Structure of Glutamate 5 Kinase of Escherichia Coli without Substrates
To be Published
2JJ4
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BU of 2jj4 by Molmil
The complex of PII and acetylglutamate kinase from Synechococcus elongatus PCC7942
Descriptor: ACETYLGLUTAMATE KINASE, N-ACETYL-L-GLUTAMATE, NITROGEN REGULATORY PROTEIN P-II
Authors:Llacer, J.L, Marco-Marin, C, Gil-Ortiz, F, Fita, I, Rubio, V.
Deposit date:2007-07-04
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.46 Å)
Cite:The Crystal Structure of the Complex of Pii and Acetylglutamate Kinase Reveals How Pii Controls the Storage of Nitrogen as Arginine
Proc.Natl.Acad.Sci.USA, 104, 2007

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