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PDB: 1038 results

6VZV
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BU of 6vzv by Molmil
TTLL6 bound to gamma-elongation analog
Descriptor: (2~{S})-2-[[[(3~{R})-3-acetamido-4-oxidanyl-4-oxidanylidene-butyl]-phosphonooxy-phosphoryl]methyl]pentanedioic acid, (2~{S})-2-[[[(3~{S})-3-acetamido-4-oxidanyl-4-oxidanylidene-butyl]-oxidanyl-phosphoryl]methyl]pentanedioic acid, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Mahalingan, K.K, Keenen, E.K, Strickland, M, Li, Y, Liu, Y, Ball, H.L, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2020-02-28
Release date:2020-08-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structural basis for polyglutamate chain initiation and elongation by TTLL family enzymes.
Nat.Struct.Mol.Biol., 27, 2020
6VZS
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BU of 6vzs by Molmil
Engineered TTLL6 mutant bound to gamma-elongation analog
Descriptor: (2~{S})-2-[[[(3~{R})-3-acetamido-4-oxidanyl-4-oxidanylidene-butyl]-phosphonooxy-phosphoryl]methyl]pentanedioic acid, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Mahalingan, K.K, Keenen, E.K, Strickland, M, Li, Y, Liu, Y, Ball, H.L, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2020-02-28
Release date:2020-08-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Structural basis for polyglutamate chain initiation and elongation by TTLL family enzymes.
Nat.Struct.Mol.Biol., 27, 2020
6VZW
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BU of 6vzw by Molmil
TTLL6 bound to the initiation analog
Descriptor: (2~{S})-2-[[[(3~{R})-3-acetamido-4-(ethylamino)-4-oxidanylidene-butyl]-phosphonooxy-phosphoryl]methyl]pentanedioic acid, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Mahalingan, K.K, Keenen, E.K, Strickland, M, Li, Y, Liu, Y, Ball, H.L, Tanner, T.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2020-02-28
Release date:2020-08-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for polyglutamate chain initiation and elongation by TTLL family enzymes.
Nat.Struct.Mol.Biol., 27, 2020
6VZU
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BU of 6vzu by Molmil
TTLL6 bound to alpha-elongation analog
Descriptor: (2~{S})-2-[[[(1~{R})-1-acetamido-4-oxidanyl-4-oxidanylidene-butyl]-oxidanyl-phosphoryl]methyl]pentanedioic acid, (2~{S})-2-[[[(1~{R})-1-acetamido-4-oxidanyl-4-oxidanylidene-butyl]-phosphonooxy-phosphoryl]methyl]pentanedioic acid, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Mahalingan, K.K, Keenen, E.K, Strickland, M, Li, Y, Liu, Y, Ball, H.B, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2020-02-28
Release date:2020-08-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural basis for polyglutamate chain initiation and elongation by TTLL family enzymes.
Nat.Struct.Mol.Biol., 27, 2020
6VZQ
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BU of 6vzq by Molmil
Engineered TTLL6 mutant bound to alpha-elongation analog
Descriptor: (2~{S})-2-[[[(1~{R})-1-acetamido-4-oxidanyl-4-oxidanylidene-butyl]-phosphonooxy-phosphoryl]methyl]pentanedioic acid, (2~{S})-2-[[[(1~{S})-1-acetamidoethyl]-phosphonooxy-phosphoryl]methyl]pentanedioic acid, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Mahalingan, K.K, Keenen, E.K, Strickland, E.K, Li, Y, Liu, Y, Ball, H.L, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2020-02-28
Release date:2020-08-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Structural basis for polyglutamate chain initiation and elongation by TTLL family enzymes.
Nat.Struct.Mol.Biol., 27, 2020
5A9G
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BU of 5a9g by Molmil
Manganese Superoxide Dismutase from Sphingobacterium sp. T2
Descriptor: MANGANESE (II) ION, MANGANESE SUPEROXIDE DISMUTASE
Authors:Rashid, G.M.M, Taylor, C.R, Liu, Y, Zhang, X, Rea, D, Fulop, V, Bugg, T.D.H.
Deposit date:2015-07-21
Release date:2015-08-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Identification of Manganese Superoxide Dismutase from Sphingobacterium Sp. T2 as a Novel Bacterial Enzyme for Lignin Oxidation.
Acs Chem.Biol., 10, 2015
1BM8
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BU of 1bm8 by Molmil
DNA-BINDING DOMAIN OF MBP1
Descriptor: TRANSCRIPTION FACTOR MBP1
Authors:Xu, R.-M, Koch, C, Liu, Y, Horton, J.R, Knapp, D, Nasmyth, K, Cheng, X.
Deposit date:1998-07-29
Release date:1999-03-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Crystal structure of the DNA-binding domain of Mbp1, a transcription factor important in cell-cycle control of DNA synthesis.
Structure, 5, 1997
1O5T
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BU of 1o5t by Molmil
Crystal structure of the aminoacylation catalytic fragment of human tryptophanyl-tRNA synthetase
Descriptor: Tryptophanyl-tRNA synthetase
Authors:Yu, Y, Liu, Y, Shen, N, Xu, X, Jia, J, Jin, Y, Arnold, E, Ding, J.
Deposit date:2003-10-05
Release date:2004-07-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Human Tryptophanyl-tRNA Synthetase Catalytic Fragment
J.BIOL.CHEM., 279, 2004
1T1J
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BU of 1t1j by Molmil
Crystal structure of genomics APC5043
Descriptor: hypothetical protein
Authors:Dong, A, Xu, X, Liu, Y, Zhang, R, Savchenko, A, Edwards, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-04-16
Release date:2004-08-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Conserved Hypothetical Protein PA1492 from Pseudomonas aeruginosa
TO BE PUBLISHED
1OYN
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BU of 1oyn by Molmil
Crystal structure of PDE4D2 in complex with (R,S)-rolipram
Descriptor: ROLIPRAM, ZINC ION, cAMP-specific phosphodiesterase PDE4D2
Authors:Huai, Q, Wang, H, Sun, Y, Kim, H.Y, Liu, Y, Ke, H.
Deposit date:2003-04-05
Release date:2003-07-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-dimensional structures of PDE4D in complex with roliprams and implication on inhibitor selectivity
Structure, 11, 2003
3UBU
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BU of 3ubu by Molmil
Crystal structure of agkisacucetin, a GpIb-binding snaclec (snake C-type lectin) that inhibits platelet
Descriptor: Agglucetin subunit alpha-1, Agglucetin subunit beta-2, GLYCEROL, ...
Authors:Gao, Y, Ge, H, Chen, H, Li, H, Liu, Y, Niu, L, Teng, M.
Deposit date:2011-10-25
Release date:2012-04-11
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of agkisacucetin, a Gpib-binding snake C-type lectin that inhibits platelet adhesion and aggregation.
Proteins, 2012
4M59
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BU of 4m59 by Molmil
Crystal structure of the pentatricopeptide repeat protein PPR10 in complex with an 18-nt psaJ RNA element
Descriptor: Chloroplast pentatricopeptide repeat protein 10, PHOSPHATE ION, psaJ RNA
Authors:Yin, P, Li, Q, Yan, C, Liu, Y, Yan, N.
Deposit date:2013-08-08
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural basis for the modular recognition of single-stranded RNA by PPR proteins.
Nature, 504, 2013
8JTN
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BU of 8jtn by Molmil
Tudor domain of TDRD3 in complex with a small molecule
Descriptor: 2-propyl-2-azoniatricyclo[7.3.0.0^{3,7}]dodeca-1(9),2,7-trien-8-amine, Tudor domain-containing protein 3
Authors:Chen, M, Wang, Z, Li, W, Shang, X, Liu, Y.
Deposit date:2023-06-22
Release date:2023-08-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Tudor domain of TDRD3 in complex with a small molecule antagonist.
Biochim Biophys Acta Gene Regul Mech, 1866, 2023
5GON
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BU of 5gon by Molmil
Structures of a beta-lactam bridged analogue in complex with tubulin
Descriptor: (3R,4R)-4-(4-methoxy-3-oxidanyl-phenyl)-3-methyl-1-(3,4,5-trimethoxyphenyl)azetidin-2-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Zhou, L, Liu, Y, Cheng, L, Wang, Y.
Deposit date:2016-07-28
Release date:2017-03-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Potent Antitumor Activities and Structure Basis of the Chiral beta-Lactam Bridged Analogue of Combretastatin A-4 Binding to Tubulin.
J. Med. Chem., 59, 2016
2AFX
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BU of 2afx by Molmil
Crystal structure of human glutaminyl cyclase in complex with 1-benzylimidazole
Descriptor: 1-BENZYL-1H-IMIDAZOLE, Glutaminyl-peptide cyclotransferase, SULFATE ION, ...
Authors:Huang, K.F, Liu, Y.L, Cheng, W.J, Ko, T.P, Wang, A.H.J.
Deposit date:2005-07-26
Release date:2005-08-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structures of human glutaminyl cyclase, an enzyme responsible for protein N-terminal pyroglutamate formation
Proc.Natl.Acad.Sci.Usa, 102, 2005
2AFS
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BU of 2afs by Molmil
Crystal structure of the genetic mutant R54W of human glutaminyl cyclase
Descriptor: Glutaminyl-peptide cyclotransferase, SULFATE ION, ZINC ION
Authors:Huang, K.F, Liu, Y.L, Cheng, W.J, Ko, T.P, Wang, A.H.J.
Deposit date:2005-07-26
Release date:2005-08-23
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structures of human glutaminyl cyclase, an enzyme responsible for protein N-terminal pyroglutamate formation
Proc.Natl.Acad.Sci.Usa, 102, 2005
2AFZ
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BU of 2afz by Molmil
Crystal structure of human glutaminyl cyclase in complex with 1-vinylimidazole
Descriptor: 1-VINYLIMIDAZOLE, Glutaminyl-peptide cyclotransferase, SULFATE ION, ...
Authors:Huang, K.F, Liu, Y.L, Cheng, W.J, Ko, T.P, Wang, A.H.J.
Deposit date:2005-07-26
Release date:2005-08-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystal structures of human glutaminyl cyclase, an enzyme responsible for protein N-terminal pyroglutamate formation
Proc.Natl.Acad.Sci.Usa, 102, 2005
4NNI
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BU of 4nni by Molmil
Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide
Descriptor: 30S ribosomal protein S1, PYRAZINE-2-CARBOXYLIC ACID
Authors:Yang, J, Liu, Y, Cai, Q, Lin, D.
Deposit date:2013-11-18
Release date:2014-12-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide.
Mol.Microbiol., 95, 2015
4NNK
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BU of 4nnk by Molmil
Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide
Descriptor: 30S ribosomal protein S1
Authors:Yang, J, Liu, Y, Cai, Q, Lin, D.
Deposit date:2013-11-18
Release date:2014-12-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide.
Mol.Microbiol., 95, 2015
8SGZ
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BU of 8sgz by Molmil
Leishmania tarentolae propionyl-CoA carboxylase (alpha-6-beta-6)
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, Propionyl-coa carboxylase beta chain, putative, ...
Authors:Lee, J.K.J, Liu, Y.T, Hu, J.J, Aphasizheva, I, Aphasizhev, R, Zhou, Z.H.
Deposit date:2023-04-13
Release date:2023-05-17
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:CryoEM reveals oligomeric isomers of a multienzyme complex and assembly mechanics.
J Struct Biol X, 7, 2023
8SGY
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BU of 8sgy by Molmil
Leishmania tarentolae propionyl-CoA carboxylase (alpha-5-beta-6)
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, Propionyl-coa carboxylase beta chain, putative, ...
Authors:Lee, J.K.J, Liu, Y.T, Hu, J.J, Aphasizheva, I, Aphasizhev, R, Zhou, Z.H.
Deposit date:2023-04-13
Release date:2023-05-17
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (8.62 Å)
Cite:CryoEM reveals oligomeric isomers of a multienzyme complex and assembly mechanics.
J Struct Biol X, 7, 2023
2AFM
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BU of 2afm by Molmil
Crystal structure of human glutaminyl cyclase at pH 6.5
Descriptor: Glutaminyl-peptide cyclotransferase, SULFATE ION, ZINC ION
Authors:Huang, K.F, Liu, Y.L, Cheng, W.J, Ko, T.P, Wang, A.H.J.
Deposit date:2005-07-26
Release date:2005-08-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal structures of human glutaminyl cyclase, an enzyme responsible for protein N-terminal pyroglutamate formation
Proc.Natl.Acad.Sci.Usa, 102, 2005
1WDF
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BU of 1wdf by Molmil
crystal structure of MHV spike protein fusion core
Descriptor: E2 glycoprotein
Authors:Xu, Y, Liu, Y, Lou, Z, Qin, L, Li, X, Bai, Z, Tien, P, Gao, G.F, Rao, Z.
Deposit date:2004-05-14
Release date:2004-06-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Coronavirus-mediated Membrane Fusion: CRYSTAL STRUCTURE OF MOUSE HEPATITIS VIRUS SPIKE PROTEIN FUSION CORE
J.Biol.Chem., 279, 2004
1J48
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BU of 1j48 by Molmil
Crystal Structure of Apo-C1027
Descriptor: Apoprotein of C1027
Authors:Chen, Y, Li, J, Liu, Y, Bartlam, M, Gao, Y, Jin, L, Tang, H, Shao, Y, Zhen, Y, Rao, Z.
Deposit date:2001-07-30
Release date:2003-06-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Apo-C1027 and Computer Modeling Analysis of C1027 Chromophore- Protein Complex
To be published
8K8F
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BU of 8k8f by Molmil
De novo design protein -N7
Descriptor: De novo design protein N7, GLYCEROL
Authors:Wang, S, Liu, Y.
Deposit date:2023-07-29
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:De novo design protein -N7
To Be Published

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PDB entries from 2024-11-06

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