Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 47 件

7ZV0
DownloadVisualize
BU of 7zv0 by Molmil
Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP-2'F,2'dAMP)
分子名称: 9-[(1~{R},6~{R},8~{R},9~{R},10~{R},15~{R},17~{R},18~{S})-8-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-17-yl]purin-6-amine, Stimulator of interferon protein
著者Klima, M, Smola, M, Boura, E.
登録日2022-05-13
公開日2023-11-22
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP-2'F,2'dAMP)
To Be Published
7ZVK
DownloadVisualize
BU of 7zvk by Molmil
Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP-IMP)
分子名称: 9-[(1~{R},6~{R},8~{R},9~{R},10~{R},15~{R},17~{R},18~{S})-8-(6-aminopurin-9-yl)-9-fluoranyl-3,12,18-tris(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-17-yl]-3~{H}-purin-6-one, Stimulator of interferon protein
著者Klima, M, Smola, M, Boura, E.
登録日2022-05-16
公開日2023-11-29
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP-IMP)
To Be Published
7ZWL
DownloadVisualize
BU of 7zwl by Molmil
Crystal structure of human STING in complex with 3',3'-c-di-(2'F,2'dAMP)
分子名称: 9-[(1~{R},6~{R},8~{R},9~{S},10~{R},15~{R},17~{R},18~{S})-17-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,11,13-tetraoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-8-yl]purin-6-amine, Stimulator of interferon protein, Ubiquitin-like protein SMT3
著者Klima, M, Smola, M, Boura, E.
登録日2022-05-19
公開日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of human STING in complex with 3',3'-c-di-(2'F,2'dAMP)
To Be Published
7ZXB
DownloadVisualize
BU of 7zxb by Molmil
Crystal structure of human STING in complex with 3',3'-c-(2'dAMP-2'F,2'dAMP)
分子名称: 9-[(1~{R},6~{R},8~{R},10~{S},15~{R},17~{R},18~{S})-8-(6-aminopurin-9-yl)-18-fluoranyl-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-17-yl]purin-6-amine, Stimulator of interferon protein
著者Klima, M, Smola, M, Boura, E.
登録日2022-05-20
公開日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of human STING in complex with 3',3'-c-(2'dAMP-2'F,2'dAMP)
To Be Published
8A2X
DownloadVisualize
BU of 8a2x by Molmil
Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP(S)-2'F,2'dAMP(S))
分子名称: 9-[(1~{R},3~{R},6~{R},8~{R},9~{R},10~{R},12~{R},15~{R},17~{R},18~{S})-8-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanylidene)-3,12-bis(sulfanyl)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-17-yl]purin-6-amine, Stimulator of interferon protein
著者Klima, M, Smola, M, Boura, E.
登録日2022-06-06
公開日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP(S)-2'F,2'dAMP(S))
To Be Published
7OY9
DownloadVisualize
BU of 7oy9 by Molmil
Crystal structure of GMP reductase from mycobacterium smegmatis.
分子名称: Guanosine 5'-monophosphate reductase
著者Dolezal, M, Klima, M, Pichova, I.
登録日2021-06-24
公開日2022-04-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The mycobacterial guaB1 gene encodes a guanosine 5'-monophosphate reductase with a cystathionine-beta-synthase domain.
Febs J., 289, 2022
8BWU
DownloadVisualize
BU of 8bwu by Molmil
Crystal structure of SARS-CoV-2 nsp14 methyltransferase domain in complex with the SS148 inhibitor
分子名称: (2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-(4-azanyl-5-cyano-pyrrolo[2,3-d]pyrimidin-7-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid, Transcription factor ETV6,Proofreading exoribonuclease nsp14, ZINC ION
著者Konkolova, E, Klima, M, Boura, E, Jin, J, Kaniskan, H.U, Han, Y, Vedadi, M.
登録日2022-12-07
公開日2023-10-11
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Drug Discovery in Low Data Regimes: Leveraging a Computational Pipeline for the Discovery of Novel SARS-CoV-2 Nsp14-MTase Inhibitors.
Biorxiv, 2024
6YHU
DownloadVisualize
BU of 6yhu by Molmil
Crystal structure of the nsp7-nsp8 complex of SARS-CoV-2
分子名称: Replicase polyprotein 1a
著者Konkolova, E, Klima, M, Boura, E.
登録日2020-03-31
公開日2020-04-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural analysis of the putative SARS-CoV-2 primase complex.
J.Struct.Biol., 211, 2020
7Q3B
DownloadVisualize
BU of 7q3b by Molmil
Crystal structure of human STING in complex with 3'3'-c-(2'F,2'dA-isonucA)MP
分子名称: 3'3'-c-(2'F,2'dA-isonucA)MP, Stimulator of interferon genes protein
著者Smola, M, Klima, M, Boura, E.
登録日2021-10-27
公開日2022-06-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.55733919 Å)
主引用文献Discovery of isonucleotidic CDNs as potent STING agonists with immunomodulatory potential.
Structure, 30, 2022
6Q69
DownloadVisualize
BU of 6q69 by Molmil
Crystal structure of porcine ACBD3 GOLD domain in complex with 3A protein of enterovirus-G1
分子名称: Genome polyprotein, Peripherial benzodiazepine receptor associated protein
著者Smola, M, Boura, E, Klima, M.
登録日2018-12-10
公開日2019-11-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.747 Å)
主引用文献Structural basis for hijacking of the host ACBD3 protein by bovine and porcine enteroviruses and kobuviruses.
Arch. Virol., 165, 2020
6Q67
DownloadVisualize
BU of 6q67 by Molmil
Crystal structure of porcine ACBD3 GOLD domain in complex with 3A protein of Aichivirus C
分子名称: 3A, Peripherial benzodiazepine receptor associated protein, beta-D-glucopyranose
著者Smola, M, Boura, E, Klima, M.
登録日2018-12-10
公開日2019-11-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.249 Å)
主引用文献Structural basis for hijacking of the host ACBD3 protein by bovine and porcine enteroviruses and kobuviruses.
Arch. Virol., 165, 2020
6Q68
DownloadVisualize
BU of 6q68 by Molmil
Crystal structure of bovine ACBD3 GOLD domain in complex with 3A protein of enterovirus-F2 (fusion protein)
分子名称: Acyl-CoA binding domain containing 3, Genome polyprotein, beta-D-glucopyranose
著者Smola, M, Boura, E, Klima, M.
登録日2018-12-10
公開日2019-11-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.161 Å)
主引用文献Structural basis for hijacking of the host ACBD3 protein by bovine and porcine enteroviruses and kobuviruses.
Arch. Virol., 165, 2020
7Q85
DownloadVisualize
BU of 7q85 by Molmil
Crystal structure of human STING in complex with MD1193
分子名称: 9-[(1R,6R,8R,13E,15R,17R,18R)-17-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,16-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadec-13-en-8-yl]purin-6-amine, Stimulator of interferon genes protein
著者Smola, M, Klima, M, Boura, E.
登録日2021-11-10
公開日2022-10-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.359 Å)
主引用文献Vinylphosphonate-based cyclic dinucleotides enhance STING-mediated cancer immunotherapy.
Eur.J.Med.Chem., 259, 2023
7R50
DownloadVisualize
BU of 7r50 by Molmil
Crystal structure of GMP reductase from mycobacterium smegmatis in complex with GMP.
分子名称: GUANOSINE-5'-MONOPHOSPHATE, Inosine-5-monophosphate dehydrogenase guaB1
著者Dolezal, M, Klima, M, Pichova, I.
登録日2022-02-09
公開日2022-04-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The mycobacterial guaB1 gene encodes a guanosine 5'-monophosphate reductase with a cystathionine-beta-synthase domain.
Febs J., 289, 2022
8CGB
DownloadVisualize
BU of 8cgb by Molmil
Monkeypox virus VP39 in complex with SAH
分子名称: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Silhan, J, Klima, M, Skvara, P, Boura, E.
登録日2023-02-03
公開日2023-04-26
最終更新日2023-05-03
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Discovery and structural characterization of monkeypox virus methyltransferase VP39 inhibitors reveal similarities to SARS-CoV-2 nsp14 methyltransferase.
Nat Commun, 14, 2023
8ORV
DownloadVisualize
BU of 8orv by Molmil
Crystal structure of monkeypox virus poxin in complex with the STING agonist MD1203
分子名称: 9-[(1~{S},6~{R},8~{R},9~{R},10~{R},15~{R},17~{R},18~{R})-8-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecan-17-yl]-1~{H}-purin-6-one, MPXVgp165
著者Duchoslav, V, Klima, M, Boura, E.
登録日2023-04-17
公開日2023-12-20
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Fluorinated cGAMP analogs, which act as STING agonists and are not cleavable by poxins: Structural basis of their function.
Structure, 32, 2024
8P44
DownloadVisualize
BU of 8p44 by Molmil
Crystal structure of monkeypox virus poxin in complex with the STING agonist MD1202D
分子名称: 9-[(1~{S},3~{R},6~{R},8~{R},9~{R},10~{R},12~{R},15~{R},17~{R},18~{R})-8-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanylidene)-3,12-bis(sulfanyl)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecan-17-yl]-1~{H}-purin-6-one, MPXVgp165
著者Duchoslav, V, Klima, M, Boura, E.
登録日2023-05-19
公開日2023-12-20
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Fluorinated cGAMP analogs, which act as STING agonists and are not cleavable by poxins: Structural basis of their function.
Structure, 32, 2024
8A23
DownloadVisualize
BU of 8a23 by Molmil
Crystal structure of SARS-CoV-2 nsp10/nsp16 methyltransferase in complex with TO383
分子名称: (2R,3R,4S,5R)-2-[4-azanyl-5-(2-quinolin-3-ylethynyl)pyrrolo[2,3-d]pyrimidin-7-yl]-5-(hydroxymethyl)oxolane-3,4-diol, 2'-O-methyltransferase nsp16, GLYCEROL, ...
著者Hanigovsky, M, Krafcikova, P, Klima, M, Boura, E.
登録日2022-06-02
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of SARS-CoV-2 nsp10/nsp16 methyltransferase in complex with TO383
To Be Published
8OIV
DownloadVisualize
BU of 8oiv by Molmil
Monkeypox virus VP39 in complex with SAH and cap0
分子名称: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Skvara, P, Chalupska, D, Silhan, J, Klima, M, Boura, E.
登録日2023-03-23
公開日2023-08-23
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Structural basis for RNA-cap recognition and methylation by the mpox methyltransferase VP39.
Antiviral Res., 216, 2023
8P7A
DownloadVisualize
BU of 8p7a by Molmil
Crystal structure of the ORD domain of human ORP8
分子名称: Oxysterol-binding protein-related protein 8
著者Eisenreichova, A, Klima, M, Boura, E.
登録日2023-05-30
公開日2023-08-23
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Crystal Structure of the ORP8 Lipid Transport ORD Domain: Model of Lipid Transport.
Cells, 12, 2023
7ZIU
DownloadVisualize
BU of 7ziu by Molmil
Crystal structure of Ntaya virus NS5 polymerase domain
分子名称: Genome polyprotein, ZINC ION
著者Krejcova, K, Klima, M, Boura, E.
登録日2022-04-08
公開日2023-04-19
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and functional insights in flavivirus NS5 proteins gained by the structure of Ntaya virus polymerase and methyltransferase.
Structure, 2024
8B07
DownloadVisualize
BU of 8b07 by Molmil
Crystal structure of monkeypox virus methyltransferase VP39 in complex with sinefungin
分子名称: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase, SINEFUNGIN
著者Silhan, J, Klima, M, Boura, E.
登録日2022-09-07
公開日2023-04-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Discovery and structural characterization of monkeypox virus methyltransferase VP39 inhibitors reveal similarities to SARS-CoV-2 nsp14 methyltransferase.
Nat Commun, 14, 2023
<12

 

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon